RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 CCSER1Q9C0I3 900 aa15.25■□□□□ 0.03
NEK3-210ENST00000620675 POLD4Q9HCU8 107 aa15.25■□□□□ 0.03
NEK3-210ENST00000620675 LYPLA2O95372 231 aa15.24■□□□□ 0.03
NEK3-210ENST00000620675 TARBP2Q15633 366 aaKnown RBP15.24■□□□□ 0.03
NEK3-210ENST00000620675 NAALADL2Q58DX5 795 aa15.24■□□□□ 0.03
NEK3-210ENST00000620675 ADALQ6DHV7 355 aa15.24■□□□□ 0.03
NEK3-210ENST00000620675 CLEC17AQ6ZS10 378 aa15.24■□□□□ 0.03
NEK3-210ENST00000620675 NEK9Q8TD19 979 aa15.24■□□□□ 0.03
NEK3-210ENST00000620675 BBXQ8WY36 941 aaPredicted RBP15.24■□□□□ 0.03
NEK3-210ENST00000620675 BLOC1S4Q9NUP1 217 aa15.24■□□□□ 0.03
NEK3-210ENST00000620675 HBP1O60381 514 aa15.24■□□□□ 0.03
NEK3-210ENST00000620675 SLC26A2P50443 739 aa15.24■□□□□ 0.03
NEK3-210ENST00000620675 TLE2Q04725 743 aa15.24■□□□□ 0.03
NEK3-210ENST00000620675 DRP2Q13474 957 aa15.24■□□□□ 0.03
NEK3-210ENST00000620675 SNX17Q15036 470 aa15.24■□□□□ 0.03
NEK3-210ENST00000620675 NFRKBQ6P4R8 1299 aa15.24■□□□□ 0.03
NEK3-210ENST00000620675 RUFY4Q6ZNE9 571 aa15.24■□□□□ 0.03
NEK3-210ENST00000620675 ATP11BQ9Y2G3 1177 aa15.24■□□□□ 0.03
NEK3-210ENST00000620675 CYP2C9P11712 490 aa15.23■□□□□ 0.03
NEK3-210ENST00000620675 RARRES1P49788 294 aa15.23■□□□□ 0.03
NEK3-210ENST00000620675 RTP1P59025 263 aa15.23■□□□□ 0.03
NEK3-210ENST00000620675 XKR9Q5GH70 373 aa15.23■□□□□ 0.03
NEK3-210ENST00000620675 FAM126BQ8IXS8 530 aa15.23■□□□□ 0.03
NEK3-210ENST00000620675 NIFKQ9BYG3 293 aaKnown RBP15.23■□□□□ 0.03
NEK3-210ENST00000620675 BHMT2Q9H2M3 363 aa15.23■□□□□ 0.03
NEK3-210ENST00000620675 CYP26B1Q9NR63 512 aa15.23■□□□□ 0.03
NEK3-210ENST00000620675 C17orf102A2RUQ5 167 aa15.23■□□□□ 0.03
NEK3-210ENST00000620675 PRPF40AO75400 957 aaKnown RBP15.23■□□□□ 0.03
NEK3-210ENST00000620675 PFKFB1P16118 471 aa15.23■□□□□ 0.03
NEK3-210ENST00000620675 NDUFA8P51970 172 aa15.23■□□□□ 0.03
NEK3-210ENST00000620675 DHX8Q14562 1220 aaKnown RBP15.23■□□□□ 0.03
NEK3-210ENST00000620675 SESTD1Q86VW0 696 aa15.23■□□□□ 0.03
NEK3-210ENST00000620675 FSIP1Q8NA03 581 aa15.23■□□□□ 0.03
NEK3-210ENST00000620675 DHX38Q92620 1227 aaKnown RBP15.23■□□□□ 0.03
NEK3-210ENST00000620675 CEP170P1Q96L14 293 aa15.23■□□□□ 0.03
NEK3-210ENST00000620675 NRBP2Q9NSY0 501 aa15.23■□□□□ 0.03
NEK3-210ENST00000620675 C22orf31O95567 290 aa15.22■□□□□ 0.03
NEK3-210ENST00000620675 CMA1P23946 247 aa15.22■□□□□ 0.03
NEK3-210ENST00000620675 KLRC1P26715 233 aa15.22■□□□□ 0.03
NEK3-210ENST00000620675 MKRN4PQ13434 485 aaPredicted RBP15.22■□□□□ 0.03
NEK3-210ENST00000620675 MCM6Q14566 821 aa15.22■□□□□ 0.03
NEK3-210ENST00000620675 E2F4Q16254 413 aa15.22■□□□□ 0.03
NEK3-210ENST00000620675 PTGISQ16647 500 aa15.22■□□□□ 0.03
NEK3-210ENST00000620675 SH3RF1Q7Z6J0 888 aa15.22■□□□□ 0.03
NEK3-210ENST00000620675 LRRC71Q8N4P6 559 aa15.22■□□□□ 0.03
NEK3-210ENST00000620675 TMEM87AQ8NBN3 555 aa15.22■□□□□ 0.03
NEK3-210ENST00000620675 RASSF8Q8NHQ8 419 aa15.22■□□□□ 0.03
NEK3-210ENST00000620675 CALML4Q96GE6 196 aa15.22■□□□□ 0.03
NEK3-210ENST00000620675 CDK5RAP3Q96JB5 506 aa15.22■□□□□ 0.03
NEK3-210ENST00000620675 FAM167AQ96KS9 214 aa15.22■□□□□ 0.03
NEK3-210ENST00000620675 NACC1Q96RE7 527 aa15.22■□□□□ 0.03
NEK3-210ENST00000620675 HPSEQ9Y251 543 aa15.22■□□□□ 0.03
NEK3-210ENST00000620675 NRCAMQ92823 1304 aa15.22■□□□□ 0.03
NEK3-210ENST00000620675 LAMA3Q16787 3333 aa15.22■□□□□ 0.03
NEK3-210ENST00000620675 POLR2DO15514 142 aaKnown RBP15.21■□□□□ 0.03
NEK3-210ENST00000620675 CD4P01730 458 aa15.21■□□□□ 0.03
NEK3-210ENST00000620675 CLCN3P51790 818 aa15.21■□□□□ 0.03
NEK3-210ENST00000620675 FAAP100Q0VG06 881 aa15.21■□□□□ 0.03
NEK3-210ENST00000620675 MTHFD1LQ6UB35 978 aa15.21■□□□□ 0.03
NEK3-210ENST00000620675 STAMQ92783 540 aa15.21■□□□□ 0.03
NEK3-210ENST00000620675 DHX58Q96C10 678 aa15.21■□□□□ 0.03
NEK3-210ENST00000620675 RUSC1Q9BVN2 902 aa15.21■□□□□ 0.03
NEK3-210ENST00000620675 XPNPEP1Q9NQW7 623 aa15.21■□□□□ 0.03
NEK3-210ENST00000620675 TUBE1Q9UJT0 475 aa15.21■□□□□ 0.03
NEK3-210ENST00000620675 KCNH3Q9ULD8 1083 aa15.21■□□□□ 0.03
NEK3-210ENST00000620675 KDM3AQ9Y4C1 1321 aa15.21■□□□□ 0.03
NEK3-210ENST00000620675 MBLAC1A4D2B0 266 aaPredicted RBP15.21■□□□□ 0.03
NEK3-210ENST00000620675 USO1O60763 962 aaKnown RBP15.21■□□□□ 0.03
NEK3-210ENST00000620675 SSBP05455 408 aaKnown RBP eCLIP15.21■□□□□ 0.03
NEK3-210ENST00000620675 LIG1P18858 919 aa15.21■□□□□ 0.03
NEK3-210ENST00000620675 RAD51AP2Q09MP3 1159 aa15.21■□□□□ 0.03
NEK3-210ENST00000620675 RRAGBQ5VZM2 374 aa15.21■□□□□ 0.03
NEK3-210ENST00000620675 MAEAQ7L5Y9 396 aa15.21■□□□□ 0.03
NEK3-210ENST00000620675 ANKRD33Q7Z3H0 272 aa15.21■□□□□ 0.03
NEK3-210ENST00000620675 MTRQ99707 1265 aa15.21■□□□□ 0.03
NEK3-210ENST00000620675 ANKEF1Q9NU02 776 aa15.21■□□□□ 0.03
NEK3-210ENST00000620675 UMODL1Q5DID0 1318 aa15.21■□□□□ 0.03
NEK3-210ENST00000620675 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.2■□□□□ 0.02
NEK3-210ENST00000620675 NPHP3-ACAD11A0A0J9YXS1 232 aa15.2■□□□□ 0.02
NEK3-210ENST00000620675 A0A1W2PQ27 194 aa15.2■□□□□ 0.02
NEK3-210ENST00000620675 A0A1W2PQ64 194 aa15.2■□□□□ 0.02
NEK3-210ENST00000620675 A0A1W2PQD8 194 aa15.2■□□□□ 0.02
NEK3-210ENST00000620675 EYA4O95677 639 aa15.2■□□□□ 0.02
NEK3-210ENST00000620675 PLA2G4BP0C869 781 aa15.2■□□□□ 0.02
NEK3-210ENST00000620675 SLC12A3P55017 1021 aa15.2■□□□□ 0.02
NEK3-210ENST00000620675 ZNF484Q5JVG2 852 aa15.2■□□□□ 0.02
NEK3-210ENST00000620675 C1orf53Q5VUE5 145 aa15.2■□□□□ 0.02
NEK3-210ENST00000620675 MRPS27Q92552 414 aaKnown RBP15.2■□□□□ 0.02
NEK3-210ENST00000620675 ZNF668Q96K58 619 aaPredicted RBP15.2■□□□□ 0.02
NEK3-210ENST00000620675 PPP1R16BQ96T49 567 aa15.2■□□□□ 0.02
NEK3-210ENST00000620675 NT5C3AQ9H0P0 336 aa15.2■□□□□ 0.02
NEK3-210ENST00000620675 FAM49AQ9H0Q0 323 aaPredicted RBP15.2■□□□□ 0.02
NEK3-210ENST00000620675 SUGCTQ9HAC7 445 aa15.2■□□□□ 0.02
NEK3-210ENST00000620675 GPRC5CQ9NQ84 441 aa15.2■□□□□ 0.02
NEK3-210ENST00000620675 DBR1Q9UK59 544 aaKnown RBP15.2■□□□□ 0.02
NEK3-210ENST00000620675 DNM3Q9UQ16 869 aa15.2■□□□□ 0.02
NEK3-210ENST00000620675 COL1A2P08123 1366 aa15.2■□□□□ 0.02
NEK3-210ENST00000620675 DKC1O60832 514 aaKnown RBP eCLIP15.2■□□□□ 0.02
NEK3-210ENST00000620675 MUTP22033 750 aa15.2■□□□□ 0.02
NEK3-210ENST00000620675 CASP1P29466 404 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms