RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 CUL4BQ13620 913 aa23.98■■□□□ 1.43
SGMS1-210ENST00000619438 NONOQ15233 471 aaKnown RBP eCLIP23.98■■□□□ 1.436e-7■■■□□ 17.6
SGMS1-210ENST00000619438 VSTM4Q8IW00 320 aa23.98■■□□□ 1.43
SGMS1-210ENST00000619438 BADQ92934 168 aa23.98■■□□□ 1.43
SGMS1-210ENST00000619438 SENP7Q9BQF6 1050 aa23.98■■□□□ 1.43
SGMS1-210ENST00000619438 BCAS3Q9H6U6 928 aa23.98■■□□□ 1.43
SGMS1-210ENST00000619438 JADE2Q9NQC1 790 aa23.98■■□□□ 1.43
SGMS1-210ENST00000619438 DYNC1I1O14576 645 aa23.97■■□□□ 1.43
SGMS1-210ENST00000619438 GTF2F1P35269 517 aaKnown RBP eCLIP23.97■■□□□ 1.43
SGMS1-210ENST00000619438 INF2Q27J81 1249 aa23.97■■□□□ 1.43
SGMS1-210ENST00000619438 METTL7BQ6UX53 244 aa23.97■■□□□ 1.43
SGMS1-210ENST00000619438 AK8Q96MA6 479 aa23.97■■□□□ 1.43
SGMS1-210ENST00000619438 MED15Q96RN5 788 aa23.97■■□□□ 1.43
SGMS1-210ENST00000619438 MXRA8Q9BRK3 442 aa23.97■■□□□ 1.43
SGMS1-210ENST00000619438 CCSER1Q9C0I3 900 aa23.97■■□□□ 1.43
SGMS1-210ENST00000619438 TRPV6Q9H1D0 765 aa23.97■■□□□ 1.43
SGMS1-210ENST00000619438 PKD2L1Q9P0L9 805 aa23.97■■□□□ 1.43
SGMS1-210ENST00000619438 KIAA0355O15063 1070 aa23.96■■□□□ 1.43
SGMS1-210ENST00000619438 SFPQP23246 707 aaKnown RBP eCLIP23.96■■□□□ 1.43
SGMS1-210ENST00000619438 BMP8BP34820 402 aa23.96■■□□□ 1.43
SGMS1-210ENST00000619438 SREBF1P36956 1147 aa23.96■■□□□ 1.43
SGMS1-210ENST00000619438 ARHGAP4P98171 946 aa23.96■■□□□ 1.43
SGMS1-210ENST00000619438 SP4Q02446 784 aa23.96■■□□□ 1.43
SGMS1-210ENST00000619438 ARMCX5Q6P1M9 558 aa23.96■■□□□ 1.43
SGMS1-210ENST00000619438 PPP1R13LQ8WUF5 828 aa23.96■■□□□ 1.43
SGMS1-210ENST00000619438 NRDCO43847 1150 aa23.95■■□□□ 1.43
SGMS1-210ENST00000619438 MYL1P05976 194 aa23.95■■□□□ 1.43
SGMS1-210ENST00000619438 SUPT20HL2P0C7V6 817 aa23.95■■□□□ 1.43
SGMS1-210ENST00000619438 CEP55Q53EZ4 464 aa23.95■■□□□ 1.43
SGMS1-210ENST00000619438 SPATA1Q5VX52 437 aa23.95■■□□□ 1.43
SGMS1-210ENST00000619438 NFRKBQ6P4R8 1299 aa23.95■■□□□ 1.43
SGMS1-210ENST00000619438 KATNAL1Q9BW62 490 aa23.95■■□□□ 1.43
SGMS1-210ENST00000619438 B4GALT4O60513 344 aa23.95■■□□□ 1.42
SGMS1-210ENST00000619438 ATP9AO75110 1047 aa23.95■■□□□ 1.42
SGMS1-210ENST00000619438 CD4P01730 458 aa23.95■■□□□ 1.42
SGMS1-210ENST00000619438 ZNF286BP0CG31 522 aa23.95■■□□□ 1.42
SGMS1-210ENST00000619438 CYP2W1Q8TAV3 490 aa23.95■■□□□ 1.42
SGMS1-210ENST00000619438 TMEM60Q9H2L4 133 aa23.95■■□□□ 1.42
SGMS1-210ENST00000619438 DISC1Q9NRI5 854 aa23.95■■□□□ 1.42
SGMS1-210ENST00000619438 RMND1Q9NWS8 449 aa23.95■■□□□ 1.42
SGMS1-210ENST00000619438 NEK8Q86SG6 692 aa23.94■■□□□ 1.42
SGMS1-210ENST00000619438 C7orf31Q8N865 590 aa23.94■■□□□ 1.42
SGMS1-210ENST00000619438 MTRQ99707 1265 aa23.94■■□□□ 1.42
SGMS1-210ENST00000619438 KCNH7Q9NS40 1196 aa23.94■■□□□ 1.42
SGMS1-210ENST00000619438 NOD1Q9Y239 953 aa23.94■■□□□ 1.42
SGMS1-210ENST00000619438 MYH7BA7E2Y1 1941 aa23.93■■□□□ 1.42
SGMS1-210ENST00000619438 PPP1R3GB7ZBB8 358 aa23.93■■□□□ 1.42
SGMS1-210ENST00000619438 TIMP1P01033 207 aa23.93■■□□□ 1.42
SGMS1-210ENST00000619438 ITGB8P26012 769 aa23.93■■□□□ 1.42
SGMS1-210ENST00000619438 FXR1P51114 621 aaKnown RBP eCLIP23.93■■□□□ 1.42
SGMS1-210ENST00000619438 CCDC112Q8NEF3 446 aa23.93■■□□□ 1.42
SGMS1-210ENST00000619438 KAT2BQ92831 832 aa23.93■■□□□ 1.42
SGMS1-210ENST00000619438 PPP1R12CQ9BZL4 782 aa23.93■■□□□ 1.42
SGMS1-210ENST00000619438 CUEDC2Q9H467 287 aa23.93■■□□□ 1.42
SGMS1-210ENST00000619438 MAGEF1Q9HAY2 307 aa23.93■■□□□ 1.42
SGMS1-210ENST00000619438 TRMT13Q9NUP7 481 aaKnown RBP23.93■■□□□ 1.42
SGMS1-210ENST00000619438 INTS13Q9NVM9 706 aa23.93■■□□□ 1.42
SGMS1-210ENST00000619438 TBX21Q9UL17 535 aa23.93■■□□□ 1.42
SGMS1-210ENST00000619438 KCNA2P16389 499 aa23.92■■□□□ 1.42
SGMS1-210ENST00000619438 PSEN2P49810 448 aa23.92■■□□□ 1.42
SGMS1-210ENST00000619438 PTPN11Q06124 597 aaPredicted RBP23.92■■□□□ 1.42
SGMS1-210ENST00000619438 TPD52L1Q16890 204 aaPredicted RBP23.92■■□□□ 1.42
SGMS1-210ENST00000619438 KIAA0753Q2KHM9 967 aa23.92■■□□□ 1.42
SGMS1-210ENST00000619438 GPR20Q99678 358 aa23.92■■□□□ 1.42
SGMS1-210ENST00000619438 OR52Z1P0C646 297 aa23.92■■□□□ 1.42
SGMS1-210ENST00000619438 CD44P16070 742 aaKnown RBP23.92■■□□□ 1.42
SGMS1-210ENST00000619438 STAT6P42226 847 aa23.92■■□□□ 1.42
SGMS1-210ENST00000619438 TBX2Q13207 712 aaPredicted RBP23.92■■□□□ 1.42
SGMS1-210ENST00000619438 MFSD10Q14728 455 aa23.92■■□□□ 1.42
SGMS1-210ENST00000619438 CCAR2Q8N163 923 aaKnown RBP23.92■■□□□ 1.42
SGMS1-210ENST00000619438 TMX1Q9H3N1 280 aa23.92■■□□□ 1.42
SGMS1-210ENST00000619438 HIPK3Q9H422 1215 aa23.92■■□□□ 1.42
SGMS1-210ENST00000619438 A0A1W2PPC1 479 aa23.91■■□□□ 1.42
SGMS1-210ENST00000619438 H3BRB1 525 aa23.91■■□□□ 1.42
SGMS1-210ENST00000619438 MEIS1O00470 390 aa23.91■■□□□ 1.42
SGMS1-210ENST00000619438 F2P00734 622 aa23.91■■□□□ 1.42
SGMS1-210ENST00000619438 CYP3A4P08684 503 aa23.91■■□□□ 1.42
SGMS1-210ENST00000619438 ARP10275 920 aa23.91■■□□□ 1.42
SGMS1-210ENST00000619438 HOXD8P13378 290 aaPredicted RBP23.91■■□□□ 1.42
SGMS1-210ENST00000619438 CDK11BP21127 795 aaKnown RBP23.91■■□□□ 1.42
SGMS1-210ENST00000619438 UTP14CQ5TAP6 766 aaKnown RBP23.91■■□□□ 1.42
SGMS1-210ENST00000619438 CDKAL1Q5VV42 579 aa23.91■■□□□ 1.42
SGMS1-210ENST00000619438 NYAP1Q6ZVC0 841 aa23.91■■□□□ 1.42
SGMS1-210ENST00000619438 TUT1Q9H6E5 874 aaKnown RBP23.91■■□□□ 1.42
SGMS1-210ENST00000619438 CASP1P29466 404 aa23.9■■□□□ 1.42
SGMS1-210ENST00000619438 UBA7P41226 1012 aa23.9■■□□□ 1.42
SGMS1-210ENST00000619438 NAALADL2Q58DX5 795 aa23.9■■□□□ 1.42
SGMS1-210ENST00000619438 ZNF658Q5TYW1 1059 aaPredicted RBP23.9■■□□□ 1.42
SGMS1-210ENST00000619438 RRAGBQ5VZM2 374 aa23.9■■□□□ 1.42
SGMS1-210ENST00000619438 TDHQ8IZJ6 230 aa23.9■■□□□ 1.42
SGMS1-210ENST00000619438 SEPT1Q8WYJ6 367 aa23.9■■□□□ 1.42
SGMS1-210ENST00000619438 C16orf70Q9BSU1 422 aa23.9■■□□□ 1.42
SGMS1-210ENST00000619438 A0A1B0GTH6 734 aa23.89■■□□□ 1.42
SGMS1-210ENST00000619438 FAM86B1E9PN63 330 aa23.89■■□□□ 1.42
SGMS1-210ENST00000619438 LGALS2P05162 132 aa23.89■■□□□ 1.42
SGMS1-210ENST00000619438 FAM86B2P0C5J1 330 aa23.89■■□□□ 1.42
SGMS1-210ENST00000619438 CYP2C9P11712 490 aa23.89■■□□□ 1.42
SGMS1-210ENST00000619438 TNNT1P13805 278 aa23.89■■□□□ 1.42
SGMS1-210ENST00000619438 CYP2C18P33260 490 aa23.89■■□□□ 1.42
SGMS1-210ENST00000619438 FPGSQ05932 587 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms