RNA–Protein interactions for RNA: ENST00000617024.1

SPTSSB-204, Transcript of serine palmitoyltransferase small subunit B, humanhuman

BASIC

Gene SPTSSB, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-204ENST00000617024 WDR81Q562E7 1941 aa18.33■□□□□ 0.53
SPTSSB-204ENST00000617024 PQBP1O60828 265 aaKnown RBP18.33■□□□□ 0.52
SPTSSB-204ENST00000617024 STBD1O95210 358 aa18.33■□□□□ 0.52
SPTSSB-204ENST00000617024 LYPLA2O95372 231 aa18.33■□□□□ 0.52
SPTSSB-204ENST00000617024 ME1P48163 572 aa18.33■□□□□ 0.52
SPTSSB-204ENST00000617024 GRIN1Q05586 938 aa18.33■□□□□ 0.52
SPTSSB-204ENST00000617024 GRIK4Q16099 956 aa18.33■□□□□ 0.52
SPTSSB-204ENST00000617024 GDF6Q6KF10 455 aaPredicted RBP18.33■□□□□ 0.52
SPTSSB-204ENST00000617024 LEO1Q8WVC0 666 aaPredicted RBP18.33■□□□□ 0.52
SPTSSB-204ENST00000617024 CHAMP1Q96JM3 812 aa18.33■□□□□ 0.52
SPTSSB-204ENST00000617024 NIFKQ9BYG3 293 aaKnown RBP18.33■□□□□ 0.52
SPTSSB-204ENST00000617024 WRAP73Q9P2S5 460 aaPredicted RBP18.33■□□□□ 0.52
SPTSSB-204ENST00000617024 KAT6AQ92794 2004 aa18.32■□□□□ 0.52
SPTSSB-204ENST00000617024 SLC26A4O43511 780 aa18.32■□□□□ 0.52
SPTSSB-204ENST00000617024 CUTAO60888 179 aa18.32■□□□□ 0.52
SPTSSB-204ENST00000617024 XRCC6P12956 609 aaKnown RBP eCLIP18.32■□□□□ 0.52
SPTSSB-204ENST00000617024 IGBP1P78318 339 aa18.32■□□□□ 0.52
SPTSSB-204ENST00000617024 PTGISQ16647 500 aa18.32■□□□□ 0.52
SPTSSB-204ENST00000617024 CABP7Q86V35 215 aa18.32■□□□□ 0.52
SPTSSB-204ENST00000617024 ZNF579Q8NAF0 562 aaKnown RBP18.32■□□□□ 0.52
SPTSSB-204ENST00000617024 NACC1Q96RE7 527 aa18.32■□□□□ 0.52
SPTSSB-204ENST00000617024 MMTAG2Q9BU76 263 aaKnown RBP18.32■□□□□ 0.52
SPTSSB-204ENST00000617024 TRPV6Q9H1D0 765 aa18.32■□□□□ 0.52
SPTSSB-204ENST00000617024 SEPT9Q9UHD8 586 aaPredicted RBP18.32■□□□□ 0.52
SPTSSB-204ENST00000617024 PCDHA7Q9UN72 937 aa18.32■□□□□ 0.52
SPTSSB-204ENST00000617024 NOD1Q9Y239 953 aa18.32■□□□□ 0.52
SPTSSB-204ENST00000617024 COL1A2P08123 1366 aa18.31■□□□□ 0.52
SPTSSB-204ENST00000617024 B4GALT4O60513 344 aa18.31■□□□□ 0.52
SPTSSB-204ENST00000617024 CD4P01730 458 aa18.31■□□□□ 0.52
SPTSSB-204ENST00000617024 YWHABP31946 246 aaKnown RBP18.31■□□□□ 0.52
SPTSSB-204ENST00000617024 ZNF200P98182 395 aaPredicted RBP18.31■□□□□ 0.52
SPTSSB-204ENST00000617024 ZRSR1Q15695 479 aaKnown RBP18.31■□□□□ 0.52
SPTSSB-204ENST00000617024 SPECC1Q5M775 1068 aa18.31■□□□□ 0.52
SPTSSB-204ENST00000617024 ANO5Q75V66 913 aa18.31■□□□□ 0.52
SPTSSB-204ENST00000617024 FAM126BQ8IXS8 530 aa18.31■□□□□ 0.52
SPTSSB-204ENST00000617024 LMBR1Q8WVP7 490 aa18.31■□□□□ 0.52
SPTSSB-204ENST00000617024 CALML4Q96GE6 196 aa18.31■□□□□ 0.52
SPTSSB-204ENST00000617024 CDK5RAP3Q96JB5 506 aa18.31■□□□□ 0.52
SPTSSB-204ENST00000617024 ANKEF1Q9NU02 776 aa18.31■□□□□ 0.52
SPTSSB-204ENST00000617024 TRMT13Q9NUP7 481 aaKnown RBP18.31■□□□□ 0.52
SPTSSB-204ENST00000617024 KIAA1024Q9UPX6 916 aa18.31■□□□□ 0.52
SPTSSB-204ENST00000617024 TCHHQ07283 1943 aa18.3■□□□□ 0.52
SPTSSB-204ENST00000617024 ZBTB39O15060 712 aa18.3■□□□□ 0.52
SPTSSB-204ENST00000617024 TREHO43280 583 aa18.3■□□□□ 0.52
SPTSSB-204ENST00000617024 KLRC1P26715 233 aa18.3■□□□□ 0.52
SPTSSB-204ENST00000617024 HOXC8P31273 242 aa18.3■□□□□ 0.52
SPTSSB-204ENST00000617024 ADAM17P78536 824 aa18.3■□□□□ 0.52
SPTSSB-204ENST00000617024 FAAP100Q0VG06 881 aa18.3■□□□□ 0.52
SPTSSB-204ENST00000617024 HIC1Q14526 733 aa18.3■□□□□ 0.52
SPTSSB-204ENST00000617024 ECM1Q16610 540 aa18.3■□□□□ 0.52
SPTSSB-204ENST00000617024 KCTD17Q8N5Z5 321 aa18.3■□□□□ 0.52
SPTSSB-204ENST00000617024 PIGOQ8TEQ8 1089 aa18.3■□□□□ 0.52
SPTSSB-204ENST00000617024 TRAPPC12Q8WVT3 735 aa18.3■□□□□ 0.52
SPTSSB-204ENST00000617024 EPSTI1Q96J88 318 aa18.3■□□□□ 0.52
SPTSSB-204ENST00000617024 CEP170P1Q96L14 293 aa18.3■□□□□ 0.52
SPTSSB-204ENST00000617024 CDX2Q99626 313 aaPredicted RBP18.3■□□□□ 0.52
SPTSSB-204ENST00000617024 CCSER1Q9C0I3 900 aa18.3■□□□□ 0.52
SPTSSB-204ENST00000617024 NT5C3AQ9H0P0 336 aa18.3■□□□□ 0.52
SPTSSB-204ENST00000617024 DDX19AQ9NUU7 478 aaKnown RBP18.3■□□□□ 0.52
SPTSSB-204ENST00000617024 DNM3Q9UQ16 869 aa18.3■□□□□ 0.52
SPTSSB-204ENST00000617024 KDM3AQ9Y4C1 1321 aa18.29■□□□□ 0.52
SPTSSB-204ENST00000617024 A0A087WWV3 80 aa18.29■□□□□ 0.52
SPTSSB-204ENST00000617024 ZBTB42B2RXF5 422 aa18.29■□□□□ 0.52
SPTSSB-204ENST00000617024 TXLNAP40222 546 aa18.29■□□□□ 0.52
SPTSSB-204ENST00000617024 PTK7Q13308 1070 aa18.29■□□□□ 0.52
SPTSSB-204ENST00000617024 TARBP2Q15633 366 aaKnown RBP18.29■□□□□ 0.52
SPTSSB-204ENST00000617024 MTERF2Q49AM1 385 aa18.29■□□□□ 0.52
SPTSSB-204ENST00000617024 XKR9Q5GH70 373 aa18.29■□□□□ 0.52
SPTSSB-204ENST00000617024 HYIQ5T013 277 aa18.29■□□□□ 0.52
SPTSSB-204ENST00000617024 MARCH8Q5T0T0 291 aa18.29■□□□□ 0.52
SPTSSB-204ENST00000617024 AXDND1Q5T1B0 1012 aaPredicted RBP18.29■□□□□ 0.52
SPTSSB-204ENST00000617024 ZNF697Q5TEC3 545 aa18.29■□□□□ 0.52
SPTSSB-204ENST00000617024 POTEGQ6S5H5 508 aa18.29■□□□□ 0.52
SPTSSB-204ENST00000617024 MTHFD1LQ6UB35 978 aa18.29■□□□□ 0.52
SPTSSB-204ENST00000617024 EXOC8Q8IYI6 725 aa18.29■□□□□ 0.52
SPTSSB-204ENST00000617024 RASSF8Q8NHQ8 419 aa18.29■□□□□ 0.52
SPTSSB-204ENST00000617024 SYMPKQ92797 1274 aaKnown RBP18.29■□□□□ 0.52
SPTSSB-204ENST00000617024 CYP26B1Q9NR63 512 aa18.29■□□□□ 0.52
SPTSSB-204ENST00000617024 TMEM39AQ9NV64 488 aa18.29■□□□□ 0.52
SPTSSB-204ENST00000617024 CCDC39Q9UFE4 941 aa18.29■□□□□ 0.52
SPTSSB-204ENST00000617024 PPME1Q9Y570 386 aa18.29■□□□□ 0.52
SPTSSB-204ENST00000617024 MBLAC1A4D2B0 266 aaPredicted RBP18.28■□□□□ 0.52
SPTSSB-204ENST00000617024 TMEM150BA6NC51 233 aa18.28■□□□□ 0.52
SPTSSB-204ENST00000617024 MAGEB2O15479 319 aa18.28■□□□□ 0.52
SPTSSB-204ENST00000617024 CLTBP09497 229 aa18.28■□□□□ 0.52
SPTSSB-204ENST00000617024 NPEPPSP55786 919 aa18.28■□□□□ 0.52
SPTSSB-204ENST00000617024 C9orf50Q5SZB4 431 aa18.28■□□□□ 0.52
SPTSSB-204ENST00000617024 PLA2G4FQ68DD2 849 aa18.28■□□□□ 0.52
SPTSSB-204ENST00000617024 ADALQ6DHV7 355 aa18.28■□□□□ 0.52
SPTSSB-204ENST00000617024 USP49Q70CQ1 688 aa18.28■□□□□ 0.52
SPTSSB-204ENST00000617024 CCDC43Q96MW1 224 aaKnown RBP18.28■□□□□ 0.52
SPTSSB-204ENST00000617024 PNMA5Q96PV4 448 aa18.28■□□□□ 0.52
SPTSSB-204ENST00000617024 PLIN2Q99541 437 aa18.28■□□□□ 0.52
SPTSSB-204ENST00000617024 LBHD1Q9BQE6 289 aaPredicted RBP18.28■□□□□ 0.52
SPTSSB-204ENST00000617024 SH2D3AQ9BRG2 576 aa18.28■□□□□ 0.52
SPTSSB-204ENST00000617024 GDPD2Q9HCC8 539 aa18.28■□□□□ 0.52
SPTSSB-204ENST00000617024 TUBE1Q9UJT0 475 aa18.28■□□□□ 0.52
SPTSSB-204ENST00000617024 DBR1Q9UK59 544 aaKnown RBP18.28■□□□□ 0.52
SPTSSB-204ENST00000617024 PCDHA2Q9Y5H9 948 aa18.28■□□□□ 0.52
SPTSSB-204ENST00000617024 CYP2C9P11712 490 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms