RNA–Protein interactions for RNA: ENST00000615940.4

LRTOMT-222, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, human

TSL 5 BASIC

Gene LRTOMT, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRTOMT-222	ENST00000615940	PSMA4	P25789	261 aa	Known RBP	10.51	□□□□□ -0.73
LRTOMT-222	ENST00000615940	PRKAR1B	P31321	381 aa		10.51	□□□□□ -0.73
LRTOMT-222	ENST00000615940	GBP2	P32456	591 aa	Predicted RBP	10.51	□□□□□ -0.73
LRTOMT-222	ENST00000615940	CSTF2	P33240	577 aa	Known RBP eCLIP	10.51	□□□□□ -0.73
LRTOMT-222	ENST00000615940	DDIT3	P35638	169 aa		10.51	□□□□□ -0.73
LRTOMT-222	ENST00000615940	IGHMBP2	P38935	993 aa	Known RBP	10.51	□□□□□ -0.73
LRTOMT-222	ENST00000615940	TUBA4A	P68366	448 aa		10.51	□□□□□ -0.73
LRTOMT-222	ENST00000615940	ATP8B2	P98198	1209 aa		10.51	□□□□□ -0.73
LRTOMT-222	ENST00000615940	GBE1	Q04446	702 aa		10.51	□□□□□ -0.73
LRTOMT-222	ENST00000615940	MTX1	Q13505	466 aa		10.51	□□□□□ -0.73
LRTOMT-222	ENST00000615940	SLFNL1	Q499Z3	407 aa		10.51	□□□□□ -0.73
LRTOMT-222	ENST00000615940	DACT2	Q5SW24	774 aa		10.51	□□□□□ -0.73
LRTOMT-222	ENST00000615940	WLS	Q5T9L3	541 aa		10.51	□□□□□ -0.73
LRTOMT-222	ENST00000615940	TRIM68	Q6AZZ1	485 aa		10.51	□□□□□ -0.73
LRTOMT-222	ENST00000615940	ANGPTL8	Q6UXH0	198 aa		10.51	□□□□□ -0.73
LRTOMT-222	ENST00000615940	CCDC13	Q8IYE1	715 aa		10.51	□□□□□ -0.73
LRTOMT-222	ENST00000615940	SYT2	Q8N9I0	419 aa	Predicted RBP	10.51	□□□□□ -0.73
LRTOMT-222	ENST00000615940	ADAMTS19	Q8TE59	1207 aa		10.51	□□□□□ -0.73
LRTOMT-222	ENST00000615940	MPHOSPH8	Q99549	860 aa		10.51	□□□□□ -0.73
LRTOMT-222	ENST00000615940	GORASP1	Q9BQQ3	440 aa		10.51	□□□□□ -0.73
LRTOMT-222	ENST00000615940	TRPV6	Q9H1D0	765 aa		10.51	□□□□□ -0.73
LRTOMT-222	ENST00000615940	C12orf49	Q9H741	205 aa		10.51	□□□□□ -0.73
LRTOMT-222	ENST00000615940	BRD9	Q9H8M2	597 aa		10.51	□□□□□ -0.73
LRTOMT-222	ENST00000615940	ZCCHC17	Q9NP64	241 aa	Known RBP	10.51	□□□□□ -0.73
LRTOMT-222	ENST00000615940	CNTN3	Q9P232	1028 aa		10.51	□□□□□ -0.73
LRTOMT-222	ENST00000615940	SCN9A	Q15858	1988 aa		10.51	□□□□□ -0.73
LRTOMT-222	ENST00000615940	NCAM2	O15394	837 aa		10.5	□□□□□ -0.73
LRTOMT-222	ENST00000615940	NR1I2	O75469	434 aa		10.5	□□□□□ -0.73
LRTOMT-222	ENST00000615940	TAF5L	O75529	589 aa		10.5	□□□□□ -0.73
LRTOMT-222	ENST00000615940	TRPA1	O75762	1119 aa		10.5	□□□□□ -0.73
LRTOMT-222	ENST00000615940	EPN2	O95208	641 aa		10.5	□□□□□ -0.73
LRTOMT-222	ENST00000615940	MUT	P22033	750 aa		10.5	□□□□□ -0.73
LRTOMT-222	ENST00000615940	HNRNPH1	P31943	449 aa	Known RBP	10.5	□□□□□ -0.73
LRTOMT-222	ENST00000615940	CCT6A	P40227	531 aa	Known RBP	10.5	□□□□□ -0.73
LRTOMT-222	ENST00000615940	HAAO	P46952	286 aa		10.5	□□□□□ -0.73
LRTOMT-222	ENST00000615940	DSTN	P60981	165 aa		10.5	□□□□□ -0.73
LRTOMT-222	ENST00000615940	NEK5	Q6P3R8	708 aa		10.5	□□□□□ -0.73
LRTOMT-222	ENST00000615940	MZT2A	Q6P582	158 aa		10.5	□□□□□ -0.73
LRTOMT-222	ENST00000615940	LDHAL6A	Q6ZMR3	332 aa		10.5	□□□□□ -0.73
LRTOMT-222	ENST00000615940	TMC4	Q7Z404	712 aa		10.5	□□□□□ -0.73
LRTOMT-222	ENST00000615940	RALYL	Q86SE5	291 aa	Known RBP	10.5	□□□□□ -0.73
LRTOMT-222	ENST00000615940	ZNF354C	Q86Y25	554 aa		10.5	□□□□□ -0.73
LRTOMT-222	ENST00000615940	SP8	Q8IXZ3	490 aa		10.5	□□□□□ -0.73
LRTOMT-222	ENST00000615940	SMARCC2	Q8TAQ2	1214 aa		10.5	□□□□□ -0.73
LRTOMT-222	ENST00000615940	NPLOC4	Q8TAT6	608 aa		10.5	□□□□□ -0.73
LRTOMT-222	ENST00000615940	FOXP3	Q9BZS1	431 aa		10.5	□□□□□ -0.73
LRTOMT-222	ENST00000615940	GLT8D2	Q9H1C3	349 aa		10.5	□□□□□ -0.73
LRTOMT-222	ENST00000615940	CNNM1	Q9NRU3	951 aa		10.5	□□□□□ -0.73
LRTOMT-222	ENST00000615940	AGO2	Q9UKV8	859 aa	Known RBP	10.5	□□□□□ -0.73
LRTOMT-222	ENST00000615940	KIAA1257	Q9ULG3	409 aa		10.5	□□□□□ -0.73
LRTOMT-222	ENST00000615940	GRID1	Q9ULK0	1009 aa		10.5	□□□□□ -0.73
LRTOMT-222	ENST00000615940	MINPP1	Q9UNW1	487 aa		10.5	□□□□□ -0.73
LRTOMT-222	ENST00000615940	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	10.5	□□□□□ -0.73
LRTOMT-222	ENST00000615940	TIAM2	Q8IVF5	1701 aa		10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	NFKBIE	O00221	500 aa		10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	CHUK	O15111	745 aa		10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	KATNA1	O75449	491 aa		10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	UBL4A	P11441	157 aa		10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	HOXD12	P35452	270 aa		10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	MCM2	P49736	904 aa		10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	PRELP	P51888	382 aa		10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	CUL3	Q13618	768 aa		10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	B4GALNT4	Q76KP1	1039 aa		10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	NLRP9	Q7RTR0	991 aa		10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	PPP1R14C	Q8TAE6	165 aa		10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	SSH3	Q8TE77	659 aa		10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	CGREF1	Q99674	301 aa		10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	EIF2A	Q9BY44	585 aa	Known RBP	10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	PPP1R12C	Q9BZL4	782 aa		10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	NSFL1C	Q9UNZ2	370 aa	Known RBP	10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	PCDHB2	Q9Y5E7	798 aa		10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	MYPN	Q86TC9	1320 aa		10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	CLRN2	A0PK11	232 aa		10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940		K7ELQ4	463 aa	Predicted RBP	10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940		K7ENM7	598 aa		10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	YKT6	O15498	198 aa		10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	XPOT	O43592	962 aa	Known RBP	10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	MAP3K6	O95382	1288 aa		10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	IFIT2	P09913	472 aa	Known RBP	10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	SEPHS1	P49903	392 aa		10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	KPNA1	P52294	538 aa	Predicted RBP	10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	CLNS1A	P54105	237 aa	Known RBP	10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	C21orf58	P58505	322 aa		10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	CHRND	Q07001	517 aa		10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	KLHL30	Q0D2K2	578 aa		10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	ATG9A	Q7Z3C6	839 aa		10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	CCDC84	Q86UT8	332 aa	Predicted RBP	10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	FATE1	Q969F0	183 aa		10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	NUDT12	Q9BQG2	462 aa		10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	RTFDC1	Q9BY42	306 aa	Predicted RBP	10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	CDV3	Q9UKY7	258 aa	Known RBP	10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	SATB2	Q9UPW6	733 aa		10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	MAFB	Q9Y5Q3	323 aa	Predicted RBP	10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	BZW2	Q9Y6E2	419 aa	Known RBP	10.49	□□□□□ -0.73
LRTOMT-222	ENST00000615940	MYO5A	Q9Y4I1	1855 aa	Known RBP	10.48	□□□□□ -0.73
LRTOMT-222	ENST00000615940	COL4A5	P29400	1685 aa		10.48	□□□□□ -0.73
LRTOMT-222	ENST00000615940	RPAP1	Q9BWH6	1393 aa	Predicted RBP	10.48	□□□□□ -0.73
LRTOMT-222	ENST00000615940	CYP2D7	A0A087X1C5	515 aa		10.48	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms