RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 GALCP54803 685 aa13.62□□□□□ -0.23
MSH6-213ENST00000614496 TRIP13Q15645 432 aaPredicted RBP13.62□□□□□ -0.23
MSH6-213ENST00000614496 CAPN12Q6ZSI9 719 aa13.62□□□□□ -0.23
MSH6-213ENST00000614496 METTL13Q8N6R0 699 aa13.62□□□□□ -0.23
MSH6-213ENST00000614496 CCDC197Q8NCU1 140 aa13.62□□□□□ -0.23
MSH6-213ENST00000614496 DAGLAQ9Y4D2 1042 aa13.62□□□□□ -0.23
MSH6-213ENST00000614496 MYH8P13535 1937 aa13.62□□□□□ -0.23
MSH6-213ENST00000614496 RSPH10B2B2RC85 870 aa13.61□□□□□ -0.23
MSH6-213ENST00000614496 RSPH10BP0C881 870 aa13.61□□□□□ -0.23
MSH6-213ENST00000614496 SLURP2P0DP57 97 aa13.61□□□□□ -0.23
MSH6-213ENST00000614496 CTNNA2P26232 953 aa13.61□□□□□ -0.23
MSH6-213ENST00000614496 HNRNPH1P31943 449 aaKnown RBP13.61□□□□□ -0.23
MSH6-213ENST00000614496 HSD17B3P37058 310 aa13.61□□□□□ -0.23
MSH6-213ENST00000614496 PPP2R2AP63151 447 aa13.61□□□□□ -0.23
MSH6-213ENST00000614496 PPP4R3CPQ6ZMV5 832 aa13.61□□□□□ -0.23
MSH6-213ENST00000614496 ELAC2Q9BQ52 826 aaKnown RBP13.61□□□□□ -0.23
MSH6-213ENST00000614496 PLCB1Q9NQ66 1216 aa13.61□□□□□ -0.23
MSH6-213ENST00000614496 KCPQ6ZWJ8 1503 aa13.61□□□□□ -0.23
MSH6-213ENST00000614496 CASP4P49662 377 aa13.61□□□□□ -0.23
MSH6-213ENST00000614496 CLNS1AP54105 237 aaKnown RBP13.61□□□□□ -0.23
MSH6-213ENST00000614496 NSMFQ6X4W1 530 aa13.61□□□□□ -0.23
MSH6-213ENST00000614496 KIF1AQ12756 1690 aa13.61□□□□□ -0.23
MSH6-213ENST00000614496 AGPSO00116 658 aa13.61□□□□□ -0.23
MSH6-213ENST00000614496 KCNMA1Q12791 1236 aa13.61□□□□□ -0.23
MSH6-213ENST00000614496 SNCBQ16143 134 aa13.61□□□□□ -0.23
MSH6-213ENST00000614496 CCDC38Q502W7 563 aa13.61□□□□□ -0.23
MSH6-213ENST00000614496 SLC51AQ86UW1 340 aa13.61□□□□□ -0.23
MSH6-213ENST00000614496 MDM1Q8TC05 714 aa13.61□□□□□ -0.23
MSH6-213ENST00000614496 NEK9Q8TD19 979 aa13.61□□□□□ -0.23
MSH6-213ENST00000614496 SPEF2Q9C093 1822 aa13.61□□□□□ -0.23
MSH6-213ENST00000614496 NID2Q14112 1375 aa13.61□□□□□ -0.23
MSH6-213ENST00000614496 ITGA4P13612 1032 aa13.61□□□□□ -0.23
MSH6-213ENST00000614496 TAL1P17542 331 aaPredicted RBP13.61□□□□□ -0.23
MSH6-213ENST00000614496 CYP11B2P19099 503 aa13.61□□□□□ -0.23
MSH6-213ENST00000614496 FECHP22830 423 aa13.61□□□□□ -0.23
MSH6-213ENST00000614496 PTGISQ16647 500 aa13.61□□□□□ -0.23
MSH6-213ENST00000614496 ABCB5Q2M3G0 1257 aa13.61□□□□□ -0.23
MSH6-213ENST00000614496 ZC2HC1CQ53FD0 456 aaPredicted RBP13.61□□□□□ -0.23
MSH6-213ENST00000614496 SH2D3AQ9BRG2 576 aa13.61□□□□□ -0.23
MSH6-213ENST00000614496 NAGPAQ9UK23 515 aa13.61□□□□□ -0.23
MSH6-213ENST00000614496 MED24O75448 989 aa13.6□□□□□ -0.23
MSH6-213ENST00000614496 ZNF571Q7Z3V5 609 aaPredicted RBP13.6□□□□□ -0.23
MSH6-213ENST00000614496 SCFD1Q8WVM8 642 aa13.6□□□□□ -0.23
MSH6-213ENST00000614496 PSMD1Q99460 953 aa13.6□□□□□ -0.23
MSH6-213ENST00000614496 CCDC77Q9BR77 488 aa13.6□□□□□ -0.23
MSH6-213ENST00000614496 PARVGQ9HBI0 331 aa13.6□□□□□ -0.23
MSH6-213ENST00000614496 NKIRAS1Q9NYS0 192 aa13.6□□□□□ -0.23
MSH6-213ENST00000614496 GGT7Q9UJ14 662 aa13.6□□□□□ -0.23
MSH6-213ENST00000614496 GOLGA8IPA6NC78 632 aa13.6□□□□□ -0.23
MSH6-213ENST00000614496 GOLGA8JA6NMD2 632 aa13.6□□□□□ -0.23
MSH6-213ENST00000614496 MMEP08473 750 aa13.6□□□□□ -0.23
MSH6-213ENST00000614496 MYCLP12524 364 aaPredicted RBP13.6□□□□□ -0.23
MSH6-213ENST00000614496 ORC2Q13416 577 aaPredicted RBP13.6□□□□□ -0.23
MSH6-213ENST00000614496 BAP1Q92560 729 aa13.6□□□□□ -0.23
MSH6-213ENST00000614496 RTFDC1Q9BY42 306 aaPredicted RBP13.6□□□□□ -0.23
MSH6-213ENST00000614496 TBK1Q9UHD2 729 aa13.6□□□□□ -0.23
MSH6-213ENST00000614496 EVI5O60447 810 aa13.6□□□□□ -0.23
MSH6-213ENST00000614496 ACSL3O95573 720 aa13.6□□□□□ -0.23
MSH6-213ENST00000614496 FGRP09769 529 aa13.6□□□□□ -0.23
MSH6-213ENST00000614496 PPP4CP60510 307 aa13.6□□□□□ -0.23
MSH6-213ENST00000614496 ZNF365Q70YC5 407 aa13.6□□□□□ -0.23
MSH6-213ENST00000614496 TAOK1Q7L7X3 1001 aa13.6□□□□□ -0.23
MSH6-213ENST00000614496 MYCBPAPQ8TBZ2 947 aa13.6□□□□□ -0.23
MSH6-213ENST00000614496 CCDC17Q96LX7 622 aa13.6□□□□□ -0.23
MSH6-213ENST00000614496 TTYH3Q9C0H2 523 aa13.6□□□□□ -0.23
MSH6-213ENST00000614496 PNMA2Q9UL42 364 aa13.6□□□□□ -0.23
MSH6-213ENST00000614496 HARSP12081 509 aaKnown RBP13.59□□□□□ -0.23
MSH6-213ENST00000614496 PSMC6P62333 389 aa13.59□□□□□ -0.23
MSH6-213ENST00000614496 BIRC3Q13489 604 aa13.59□□□□□ -0.23
MSH6-213ENST00000614496 CCDC63Q8NA47 563 aa13.59□□□□□ -0.23
MSH6-213ENST00000614496 GLG1Q92896 1179 aa13.59□□□□□ -0.23
MSH6-213ENST00000614496 AZI2Q9H6S1 392 aa13.59□□□□□ -0.23
MSH6-213ENST00000614496 TYW1Q9NV66 732 aaKnown RBP13.59□□□□□ -0.23
MSH6-213ENST00000614496 USP11P51784 963 aa13.59□□□□□ -0.23
MSH6-213ENST00000614496 LRRC55Q6ZSA7 311 aa13.59□□□□□ -0.23
MSH6-213ENST00000614496 TBC1D1Q86TI0 1168 aaPredicted RBP13.59□□□□□ -0.23
MSH6-213ENST00000614496 DYDC2Q96IM9 177 aa13.59□□□□□ -0.23
MSH6-213ENST00000614496 FGFBP2Q9BYJ0 223 aa13.59□□□□□ -0.23
MSH6-213ENST00000614496 SPATA31A1Q5TZJ5 1347 aa13.59□□□□□ -0.23
MSH6-213ENST00000614496 N4BP2Q86UW6 1770 aaPredicted RBP13.59□□□□□ -0.23
MSH6-213ENST00000614496 GPR75-ASB3A0A0A6YYF3 556 aa13.59□□□□□ -0.23
MSH6-213ENST00000614496 DLATP10515 647 aaKnown RBP13.59□□□□□ -0.23
MSH6-213ENST00000614496 GCLMP48507 274 aa13.59□□□□□ -0.23
MSH6-213ENST00000614496 ERVK-9P63128 1117 aa13.59□□□□□ -0.23
MSH6-213ENST00000614496 MEI1Q5TIA1 1274 aa13.59□□□□□ -0.23
MSH6-213ENST00000614496 CATSPER3Q86XQ3 398 aa13.59□□□□□ -0.23
MSH6-213ENST00000614496 SLC35G2Q8TBE7 412 aa13.59□□□□□ -0.23
MSH6-213ENST00000614496 LRRC15Q8TF66 581 aa13.59□□□□□ -0.23
MSH6-213ENST00000614496 PPEF1O14829 653 aaPredicted RBP13.58□□□□□ -0.23
MSH6-213ENST00000614496 BBOX1O75936 387 aa13.58□□□□□ -0.23
MSH6-213ENST00000614496 FOSP01100 380 aaPredicted RBP13.58□□□□□ -0.23
MSH6-213ENST00000614496 LRRC14Q15048 493 aa13.58□□□□□ -0.23
MSH6-213ENST00000614496 MIER3Q7Z3K6 550 aa13.58□□□□□ -0.23
MSH6-213ENST00000614496 MSL3Q8N5Y2 521 aaKnown RBP13.58□□□□□ -0.23
MSH6-213ENST00000614496 ZNF653Q96CK0 615 aa13.58□□□□□ -0.23
MSH6-213ENST00000614496 CYFIP2Q96F07 1278 aa13.58□□□□□ -0.23
MSH6-213ENST00000614496 ISCUQ9H1K1 167 aa13.58□□□□□ -0.23
MSH6-213ENST00000614496 KIF13AQ9H1H9 1805 aa13.58□□□□□ -0.24
MSH6-213ENST00000614496 ESYT2A0FGR8 921 aa13.58□□□□□ -0.24
MSH6-213ENST00000614496 ZNF233A6NK53 670 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms