RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 HDAC7Q8WUI4 952 aa18.06■□□□□ 0.48
CNOT3-208ENST00000613073 N4BP2L2Q92802 583 aaPredicted RBP18.06■□□□□ 0.48
CNOT3-208ENST00000613073 HOMER2Q9NSB8 354 aa18.06■□□□□ 0.48
CNOT3-208ENST00000613073 PDE2AO00408 941 aaPredicted RBP18.06■□□□□ 0.48
CNOT3-208ENST00000613073 KIF1CO43896 1103 aaKnown RBP18.06■□□□□ 0.48
CNOT3-208ENST00000613073 GMPSP49915 693 aaPredicted RBP18.06■□□□□ 0.48
CNOT3-208ENST00000613073 FKBP3Q00688 224 aaKnown RBP18.06■□□□□ 0.48
CNOT3-208ENST00000613073 MAN2A1Q16706 1144 aa18.06■□□□□ 0.48
CNOT3-208ENST00000613073 ZCWPW2Q504Y3 356 aa18.06■□□□□ 0.48
CNOT3-208ENST00000613073 RPAINQ86UA6 219 aa18.06■□□□□ 0.48
CNOT3-208ENST00000613073 SYT2Q8N9I0 419 aaPredicted RBP18.06■□□□□ 0.48
CNOT3-208ENST00000613073 ERGIC2Q96RQ1 377 aa18.06■□□□□ 0.48
CNOT3-208ENST00000613073 FRMD3A2A2Y4 597 aa18.05■□□□□ 0.48
CNOT3-208ENST00000613073 MAP3K10Q02779 954 aa18.05■□□□□ 0.48
CNOT3-208ENST00000613073 CCDC40Q4G0X9 1142 aa18.05■□□□□ 0.48
CNOT3-208ENST00000613073 CCDC122Q5T0U0 273 aa18.05■□□□□ 0.48
CNOT3-208ENST00000613073 PRAMEF18Q5VWM3 479 aa18.05■□□□□ 0.48
CNOT3-208ENST00000613073 OTOP1Q7RTM1 612 aa18.05■□□□□ 0.48
CNOT3-208ENST00000613073 ZKSCAN4Q969J2 545 aaPredicted RBP18.05■□□□□ 0.48
CNOT3-208ENST00000613073 JAKMIP2Q96AA8 810 aa18.05■□□□□ 0.48
CNOT3-208ENST00000613073 NUP58Q9BVL2 599 aa18.05■□□□□ 0.48
CNOT3-208ENST00000613073 PKD2L1Q9P0L9 805 aa18.05■□□□□ 0.48
CNOT3-208ENST00000613073 FZD1Q9UP38 647 aa18.05■□□□□ 0.48
CNOT3-208ENST00000613073 KIF13BQ9NQT8 1826 aa18.05■□□□□ 0.48
CNOT3-208ENST00000613073 SFI1A8K8P3 1242 aa18.05■□□□□ 0.48
CNOT3-208ENST00000613073 ARP10275 920 aa18.05■□□□□ 0.48
CNOT3-208ENST00000613073 SLC7A5Q01650 507 aa18.05■□□□□ 0.48
CNOT3-208ENST00000613073 HOOK2Q96ED9 719 aa18.05■□□□□ 0.48
CNOT3-208ENST00000613073 RUSC1Q9BVN2 902 aa18.05■□□□□ 0.48
CNOT3-208ENST00000613073 ABCB11O95342 1321 aa18.05■□□□□ 0.48
CNOT3-208ENST00000613073 NFIBO00712 420 aa18.04■□□□□ 0.48
CNOT3-208ENST00000613073 MCM3P25205 808 aa18.04■□□□□ 0.48
CNOT3-208ENST00000613073 FNTAP49354 379 aa18.04■□□□□ 0.48
CNOT3-208ENST00000613073 SFR1Q86XK3 245 aa18.04■□□□□ 0.48
CNOT3-208ENST00000613073 SMCR8Q8TEV9 937 aaPredicted RBP18.04■□□□□ 0.48
CNOT3-208ENST00000613073 DYDC2Q96IM9 177 aa18.04■□□□□ 0.48
CNOT3-208ENST00000613073 ZNHIT6Q9NWK9 470 aaKnown RBP18.04■□□□□ 0.48
CNOT3-208ENST00000613073 COL4A3BPQ9Y5P4 624 aa18.04■□□□□ 0.48
CNOT3-208ENST00000613073 PTGER2P43116 358 aa18.04■□□□□ 0.48
CNOT3-208ENST00000613073 ZBED6P86452 979 aa18.04■□□□□ 0.48
CNOT3-208ENST00000613073 CEP55Q53EZ4 464 aa18.04■□□□□ 0.48
CNOT3-208ENST00000613073 KIRREL3Q8IZU9 778 aa18.04■□□□□ 0.48
CNOT3-208ENST00000613073 SLC24A3Q9HC58 644 aa18.04■□□□□ 0.48
CNOT3-208ENST00000613073 JADE2Q9NQC1 790 aa18.04■□□□□ 0.48
CNOT3-208ENST00000613073 CNOT7Q9UIV1 285 aaKnown RBP18.04■□□□□ 0.48
CNOT3-208ENST00000613073 HACL1Q9UJ83 578 aa18.04■□□□□ 0.48
CNOT3-208ENST00000613073 RABGAP1Q9Y3P9 1069 aa18.04■□□□□ 0.48
CNOT3-208ENST00000613073 ZNF536O15090 1300 aa18.03■□□□□ 0.48
CNOT3-208ENST00000613073 DDX39AO00148 427 aaKnown RBP18.03■□□□□ 0.48
CNOT3-208ENST00000613073 GAS7O60861 476 aa18.03■□□□□ 0.48
CNOT3-208ENST00000613073 CEP57Q86XR8 500 aa18.03■□□□□ 0.48
CNOT3-208ENST00000613073 RETREG2Q8NC44 543 aa18.03■□□□□ 0.48
CNOT3-208ENST00000613073 ZNF577Q9BSK1 485 aa18.03■□□□□ 0.48
CNOT3-208ENST00000613073 MTFR1LQ9H019 292 aa18.03■□□□□ 0.48
CNOT3-208ENST00000613073 DEFB129Q9H1M3 183 aa18.03■□□□□ 0.48
CNOT3-208ENST00000613073 MYO1AQ9UBC5 1043 aa18.03■□□□□ 0.48
CNOT3-208ENST00000613073 SIK3Q9Y2K2 1263 aa18.03■□□□□ 0.48
CNOT3-208ENST00000613073 PITPNM2Q9BZ72 1349 aa18.03■□□□□ 0.48
CNOT3-208ENST00000613073 PLA2G6O60733 806 aa18.03■□□□□ 0.48
CNOT3-208ENST00000613073 PSMD10O75832 226 aa18.03■□□□□ 0.48
CNOT3-208ENST00000613073 SLITRK3O94933 977 aa18.03■□□□□ 0.48
CNOT3-208ENST00000613073 ALAS1P13196 640 aa18.03■□□□□ 0.48
CNOT3-208ENST00000613073 PRELPP51888 382 aa18.03■□□□□ 0.48
CNOT3-208ENST00000613073 ZNF280AP59817 542 aaPredicted RBP18.03■□□□□ 0.48
CNOT3-208ENST00000613073 TNFAIP1Q13829 316 aa18.03■□□□□ 0.48
CNOT3-208ENST00000613073 R3HDM1Q15032 1099 aaKnown RBP18.03■□□□□ 0.48
CNOT3-208ENST00000613073 NBPF12Q5TAG4 269 aaPredicted RBP18.03■□□□□ 0.48
CNOT3-208ENST00000613073 PSMB7Q99436 277 aa18.03■□□□□ 0.48
CNOT3-208ENST00000613073 KCTD10Q9H3F6 313 aa18.03■□□□□ 0.48
CNOT3-208ENST00000613073 NHEJ1Q9H9Q4 299 aaPredicted RBP18.03■□□□□ 0.48
CNOT3-208ENST00000613073 RAVER2Q9HCJ3 691 aaKnown RBP18.03■□□□□ 0.48
CNOT3-208ENST00000613073 COL20A1Q9P218 1284 aa18.03■□□□□ 0.48
CNOT3-208ENST00000613073 PLEKP08567 350 aaPredicted RBP18.02■□□□□ 0.48
CNOT3-208ENST00000613073 MYBP10242 640 aa18.02■□□□□ 0.48
CNOT3-208ENST00000613073 ELF1P32519 619 aa18.02■□□□□ 0.48
CNOT3-208ENST00000613073 TTMPQ5BVD1 217 aa18.02■□□□□ 0.48
CNOT3-208ENST00000613073 RUFY1Q96T51 708 aa18.02■□□□□ 0.48
CNOT3-208ENST00000613073 HSD17B14Q9BPX1 270 aa18.02■□□□□ 0.48
CNOT3-208ENST00000613073 DMGDHQ9UI17 866 aaKnown RBP18.02■□□□□ 0.48
CNOT3-208ENST00000613073 FER1L6Q2WGJ9 1857 aa18.02■□□□□ 0.48
CNOT3-208ENST00000613073 SLC26A4O43511 780 aa18.02■□□□□ 0.48
CNOT3-208ENST00000613073 ICAM1P05362 532 aa18.02■□□□□ 0.48
CNOT3-208ENST00000613073 ADAM9Q13443 819 aa18.02■□□□□ 0.48
CNOT3-208ENST00000613073 MTMR2Q13614 643 aa18.02■□□□□ 0.48
CNOT3-208ENST00000613073 MEA1Q16626 185 aa18.02■□□□□ 0.48
CNOT3-208ENST00000613073 POLR3CQ9BUI4 534 aaPredicted RBP18.02■□□□□ 0.48
CNOT3-208ENST00000613073 SMARCAL1Q9NZC9 954 aa18.02■□□□□ 0.48
CNOT3-208ENST00000613073 CCDC189A1A4V9 331 aa18.02■□□□□ 0.47
CNOT3-208ENST00000613073 MACROD2A1Z1Q3 448 aa18.02■□□□□ 0.47
CNOT3-208ENST00000613073 MEFVO15553 781 aaPredicted RBP18.02■□□□□ 0.47
CNOT3-208ENST00000613073 FLOT1O75955 427 aa18.02■□□□□ 0.47
CNOT3-208ENST00000613073 NF2P35240 595 aa18.02■□□□□ 0.47
CNOT3-208ENST00000613073 HERVK_113P62684 666 aa18.02■□□□□ 0.47
CNOT3-208ENST00000613073 CYP27A1Q02318 531 aa18.02■□□□□ 0.47
CNOT3-208ENST00000613073 NEDD9Q14511 834 aa18.02■□□□□ 0.47
CNOT3-208ENST00000613073 TSEN2Q8NCE0 465 aaKnown RBP18.02■□□□□ 0.47
CNOT3-208ENST00000613073 SLC5A5Q92911 643 aa18.02■□□□□ 0.47
CNOT3-208ENST00000613073 DUSP10Q9Y6W6 482 aa18.02■□□□□ 0.47
CNOT3-208ENST00000613073 GUCY1A3Q02108 690 aa18.01■□□□□ 0.47
CNOT3-208ENST00000613073 APBA1Q02410 837 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms