RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 FRMD3A2A2Y4 597 aa9.89□□□□□ -0.83
CCDC47-207ENST00000612558 WDR64B1ANS9 1081 aa9.89□□□□□ -0.83
CCDC47-207ENST00000612558 LYPLA2O95372 231 aa9.89□□□□□ -0.83
CCDC47-207ENST00000612558 CYP2C8P10632 490 aa9.89□□□□□ -0.83
CCDC47-207ENST00000612558 KCNA2P16389 499 aa9.89□□□□□ -0.83
CCDC47-207ENST00000612558 EDNRBP24530 442 aa9.89□□□□□ -0.83
CCDC47-207ENST00000612558 ICAM3P32942 547 aa9.89□□□□□ -0.83
CCDC47-207ENST00000612558 MLLT3P42568 568 aaPredicted RBP9.89□□□□□ -0.83
CCDC47-207ENST00000612558 QARSP47897 775 aaKnown RBP9.89□□□□□ -0.83
CCDC47-207ENST00000612558 CCNA1P78396 465 aa9.89□□□□□ -0.83
CCDC47-207ENST00000612558 SPAG1Q07617 926 aa9.89□□□□□ -0.83
CCDC47-207ENST00000612558 GIT2Q14161 759 aa9.89□□□□□ -0.83
CCDC47-207ENST00000612558 HSP90AA4PQ58FG1 418 aa9.89□□□□□ -0.83
CCDC47-207ENST00000612558 HERC4Q5GLZ8 1057 aaPredicted RBP9.89□□□□□ -0.83
CCDC47-207ENST00000612558 FAM26FQ5R3K3 315 aa9.89□□□□□ -0.83
CCDC47-207ENST00000612558 RINT1Q6NUQ1 792 aa9.89□□□□□ -0.83
CCDC47-207ENST00000612558 TTI2Q6NXR4 508 aa9.89□□□□□ -0.83
CCDC47-207ENST00000612558 LIAT1Q6ZQX7 453 aa9.89□□□□□ -0.83
CCDC47-207ENST00000612558 ZSCAN30Q86W11 494 aa9.89□□□□□ -0.83
CCDC47-207ENST00000612558 GPRC5AQ8NFJ5 357 aa9.89□□□□□ -0.83
CCDC47-207ENST00000612558 PIGOQ8TEQ8 1089 aa9.89□□□□□ -0.83
CCDC47-207ENST00000612558 SMCR8Q8TEV9 937 aaPredicted RBP9.89□□□□□ -0.83
CCDC47-207ENST00000612558 ZNF526Q8TF50 670 aaPredicted RBP9.89□□□□□ -0.83
CCDC47-207ENST00000612558 NOC3LQ8WTT2 800 aaKnown RBP9.89□□□□□ -0.83
CCDC47-207ENST00000612558 BRI3BPQ8WY22 251 aa9.89□□□□□ -0.83
CCDC47-207ENST00000612558 HPS3Q969F9 1004 aa9.89□□□□□ -0.83
CCDC47-207ENST00000612558 SLC6A16Q9GZN6 736 aa9.89□□□□□ -0.83
CCDC47-207ENST00000612558 KCND2Q9NZV8 630 aa9.89□□□□□ -0.83
CCDC47-207ENST00000612558 IMPACTQ9P2X3 320 aa9.89□□□□□ -0.83
CCDC47-207ENST00000612558 TRIM49BA6NDI0 452 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 LRRC10BA6NIK2 292 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 ESPNB1AK53 854 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 COBLO75128 1261 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 KIF20AO95235 890 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 GCLCP48506 637 aaPredicted RBP9.88□□□□□ -0.83
CCDC47-207ENST00000612558 PMS1P54277 932 aaKnown RBP9.88□□□□□ -0.83
CCDC47-207ENST00000612558 HUNKP57058 714 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 CENPPQ6IPU0 288 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 FOXR2Q6PJQ5 311 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 C1orf186Q6ZWK4 172 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 CCDC186Q7Z3E2 898 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 SMAP1Q8IYB5 467 aaPredicted RBP9.88□□□□□ -0.83
CCDC47-207ENST00000612558 MYOCDQ8IZQ8 938 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 BANK1Q8NDB2 785 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 EMID1Q96A84 441 aaPredicted RBP9.88□□□□□ -0.83
CCDC47-207ENST00000612558 NAP1L5Q96NT1 182 aaPredicted RBP9.88□□□□□ -0.83
CCDC47-207ENST00000612558 MMP19Q99542 508 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 REEP2Q9BRK0 252 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 THAP9Q9H5L6 903 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 WRAP73Q9P2S5 460 aaPredicted RBP9.88□□□□□ -0.83
CCDC47-207ENST00000612558 DBR1Q9UK59 544 aaKnown RBP9.88□□□□□ -0.83
CCDC47-207ENST00000612558 ZKSCAN5Q9Y2L8 839 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 PCDHA2Q9Y5H9 948 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 COL4A3BPQ9Y5P4 624 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 LOXHD1Q8IVV2 1947 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 TRPM7Q96QT4 1865 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 ZNFX1Q9P2E3 1918 aaKnown RBP9.88□□□□□ -0.83
CCDC47-207ENST00000612558 DNAJC25-GNG10A0A024R161 153 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 LOC102724159A0A0B4J2E5 919 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 A0A1B0GTH6 734 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 ZBTB39O15060 712 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 TBCAO75347 108 aaKnown RBP9.88□□□□□ -0.83
CCDC47-207ENST00000612558 CCNE2O96020 404 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 PSMC5P62195 406 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 RAD51AP2Q09MP3 1159 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 NR1I3Q14994 352 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 PWP2Q15269 919 aaKnown RBP9.88□□□□□ -0.83
CCDC47-207ENST00000612558 FILIP1LQ4L180 1135 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 ANKRD40Q6AI12 368 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 C4orf19Q8IY42 314 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 CSGALNACT2Q8N6G5 542 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 ANKRD20A12PQ8NF67 263 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 TRIM47Q96LD4 638 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 DUSP9Q99956 384 aaKnown RBP9.88□□□□□ -0.83
CCDC47-207ENST00000612558 RUSC1Q9BVN2 902 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 SRRTQ9BXP5 876 aaKnown RBP9.88□□□□□ -0.83
CCDC47-207ENST00000612558 SEMA6BQ9H3T3 888 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 R3HDMLQ9H3Y0 253 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 ZHX3Q9H4I2 956 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 JPH1Q9HDC5 661 aaPredicted RBP9.88□□□□□ -0.83
CCDC47-207ENST00000612558 SLC9A2Q9UBY0 812 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 LIMA1Q9UHB6 759 aaKnown RBP9.88□□□□□ -0.83
CCDC47-207ENST00000612558 NRBP1Q9UHY1 535 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 PCDHA10Q9Y5I2 948 aa9.88□□□□□ -0.83
CCDC47-207ENST00000612558 ARHGEF35A5YM69 484 aa9.87□□□□□ -0.83
CCDC47-207ENST00000612558 KCNJ18B7U540 433 aa9.87□□□□□ -0.83
CCDC47-207ENST00000612558 DKC1O60832 514 aaKnown RBP eCLIP9.87□□□□□ -0.83
CCDC47-207ENST00000612558 OATP04181 439 aa9.87□□□□□ -0.83
CCDC47-207ENST00000612558 PGK2P07205 417 aa9.87□□□□□ -0.83
CCDC47-207ENST00000612558 PSAPP07602 524 aa9.87□□□□□ -0.83
CCDC47-207ENST00000612558 TGFB3P10600 412 aa9.87□□□□□ -0.83
CCDC47-207ENST00000612558 GAP43P17677 238 aa9.87□□□□□ -0.83
CCDC47-207ENST00000612558 PTGS1P23219 599 aa9.87□□□□□ -0.83
CCDC47-207ENST00000612558 MSNP26038 577 aaKnown RBP9.87□□□□□ -0.83
CCDC47-207ENST00000612558 EEF1GP26641 437 aaKnown RBP9.87□□□□□ -0.83
CCDC47-207ENST00000612558 GSDMDP57764 484 aa9.87□□□□□ -0.83
CCDC47-207ENST00000612558 LRRC63Q05C16 580 aa9.87□□□□□ -0.83
CCDC47-207ENST00000612558 FSTL1Q12841 308 aa9.87□□□□□ -0.83
CCDC47-207ENST00000612558 KCNJ12Q14500 433 aa9.87□□□□□ -0.83
CCDC47-207ENST00000612558 LRRC41Q15345 812 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms