RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 TBC1D10CQ8IV04 446 aa11.88□□□□□ -0.51
SSX3-204ENST00000612497 CELF4Q9BZC1 486 aaKnown RBP11.88□□□□□ -0.51
SSX3-204ENST00000612497 RNF41Q9H4P4 317 aaPredicted RBP11.88□□□□□ -0.51
SSX3-204ENST00000612497 CWH43Q9H720 699 aa11.88□□□□□ -0.51
SSX3-204ENST00000612497 CHD8Q9HCK8 2581 aa11.88□□□□□ -0.51
SSX3-204ENST00000612497 CACNA1IQ9P0X4 2223 aa11.87□□□□□ -0.51
SSX3-204ENST00000612497 ZBTB5O15062 677 aa11.87□□□□□ -0.51
SSX3-204ENST00000612497 CLASP2O75122 1294 aaKnown RBP11.87□□□□□ -0.51
SSX3-204ENST00000612497 FGFR1P11362 822 aa11.87□□□□□ -0.51
SSX3-204ENST00000612497 SDHBP21912 280 aa11.87□□□□□ -0.51
SSX3-204ENST00000612497 KCNA4P22459 653 aa11.87□□□□□ -0.51
SSX3-204ENST00000612497 PDE4AP27815 886 aa11.87□□□□□ -0.51
SSX3-204ENST00000612497 SMC1AQ14683 1233 aaKnown RBP11.87□□□□□ -0.51
SSX3-204ENST00000612497 CCDC178Q5BJE1 867 aa11.87□□□□□ -0.51
SSX3-204ENST00000612497 KIAA0319Q5VV43 1072 aa11.87□□□□□ -0.51
SSX3-204ENST00000612497 PIP4P2Q8N4L2 257 aa11.87□□□□□ -0.51
SSX3-204ENST00000612497 MRPL43Q8N983 215 aaKnown RBP11.87□□□□□ -0.51
SSX3-204ENST00000612497 GIMAP8Q8ND71 665 aaPredicted RBP11.87□□□□□ -0.51
SSX3-204ENST00000612497 ACSF2Q96CM8 615 aaPredicted RBP11.87□□□□□ -0.51
SSX3-204ENST00000612497 CHAMP1Q96JM3 812 aa11.87□□□□□ -0.51
SSX3-204ENST00000612497 ADAM2Q99965 735 aa11.87□□□□□ -0.51
SSX3-204ENST00000612497 SENP7Q9BQF6 1050 aa11.87□□□□□ -0.51
SSX3-204ENST00000612497 ATP6V0A4Q9HBG4 840 aa11.87□□□□□ -0.51
SSX3-204ENST00000612497 HELLSQ9NRZ9 838 aa11.87□□□□□ -0.51
SSX3-204ENST00000612497 C1orf112Q9NSG2 853 aa11.87□□□□□ -0.51
SSX3-204ENST00000612497 DUSP12Q9UNI6 340 aa11.87□□□□□ -0.51
SSX3-204ENST00000612497 NEDD4P46934 1319 aa11.86□□□□□ -0.51
SSX3-204ENST00000612497 ATRXP46100 2492 aa11.86□□□□□ -0.51
SSX3-204ENST00000612497 C2orf71A6NGG8 1288 aa11.86□□□□□ -0.51
SSX3-204ENST00000612497 RRN3P2A6NIE6 340 aa11.86□□□□□ -0.51
SSX3-204ENST00000612497 KLRF2D3W0D1 207 aa11.86□□□□□ -0.51
SSX3-204ENST00000612497 MGEA5O60502 916 aa11.86□□□□□ -0.51
SSX3-204ENST00000612497 SP9P0CG40 484 aa11.86□□□□□ -0.51
SSX3-204ENST00000612497 INSRRP14616 1297 aa11.86□□□□□ -0.51
SSX3-204ENST00000612497 PPM1AP35813 382 aa11.86□□□□□ -0.51
SSX3-204ENST00000612497 PBX3P40426 434 aa11.86□□□□□ -0.51
SSX3-204ENST00000612497 ATXN1P54253 815 aaKnown RBP11.86□□□□□ -0.51
SSX3-204ENST00000612497 KRT76Q01546 638 aa11.86□□□□□ -0.51
SSX3-204ENST00000612497 SPECC1Q5M775 1068 aa11.86□□□□□ -0.51
SSX3-204ENST00000612497 XRRA1Q6P2D8 792 aa11.86□□□□□ -0.51
SSX3-204ENST00000612497 KCNT2Q6UVM3 1135 aa11.86□□□□□ -0.51
SSX3-204ENST00000612497 SLC24A5Q71RS6 500 aa11.86□□□□□ -0.51
SSX3-204ENST00000612497 OTOP3Q7RTS5 596 aa11.86□□□□□ -0.51
SSX3-204ENST00000612497 HOMER1Q86YM7 354 aa11.86□□□□□ -0.51
SSX3-204ENST00000612497 STAG2Q8N3U4 1231 aa11.86□□□□□ -0.51
SSX3-204ENST00000612497 TMEM87AQ8NBN3 555 aa11.86□□□□□ -0.51
SSX3-204ENST00000612497 SEPT1Q8WYJ6 367 aa11.86□□□□□ -0.51
SSX3-204ENST00000612497 ZNF558Q96NG5 402 aa11.86□□□□□ -0.51
SSX3-204ENST00000612497 SMARCAD1Q9H4L7 1026 aa11.86□□□□□ -0.51
SSX3-204ENST00000612497 DCTPP1Q9H773 170 aa11.86□□□□□ -0.51
SSX3-204ENST00000612497 RGS18Q9NS28 235 aa11.86□□□□□ -0.51
SSX3-204ENST00000612497 GINS2Q9Y248 185 aa11.86□□□□□ -0.51
SSX3-204ENST00000612497 DENND4AQ7Z401 1863 aa11.86□□□□□ -0.51
SSX3-204ENST00000612497 GPR179Q6PRD1 2367 aa11.86□□□□□ -0.51
SSX3-204ENST00000612497 GSTTP1A0A1W2PQM5 241 aa11.85□□□□□ -0.51
SSX3-204ENST00000612497 C9IYK1 514 aa11.85□□□□□ -0.51
SSX3-204ENST00000612497 CFHP08603 1231 aa11.85□□□□□ -0.51
SSX3-204ENST00000612497 TRAF1Q13077 416 aa11.85□□□□□ -0.51
SSX3-204ENST00000612497 BMS1Q14692 1282 aaKnown RBP11.85□□□□□ -0.51
SSX3-204ENST00000612497 MCMDC2Q4G0Z9 681 aa11.85□□□□□ -0.51
SSX3-204ENST00000612497 TMC5Q6UXY8 1006 aa11.85□□□□□ -0.51
SSX3-204ENST00000612497 NLRX1Q86UT6 975 aa11.85□□□□□ -0.51
SSX3-204ENST00000612497 ENAHQ8N8S7 591 aaPredicted RBP11.85□□□□□ -0.51
SSX3-204ENST00000612497 OTUD7AQ8TE49 926 aaPredicted RBP11.85□□□□□ -0.51
SSX3-204ENST00000612497 MTMR8Q96EF0 704 aa11.85□□□□□ -0.51
SSX3-204ENST00000612497 ZSCAN10Q96SZ4 725 aaPredicted RBP11.85□□□□□ -0.51
SSX3-204ENST00000612497 KCNK12Q9HB15 430 aa11.85□□□□□ -0.51
SSX3-204ENST00000612497 DZANK1Q9NVP4 752 aa11.85□□□□□ -0.51
SSX3-204ENST00000612497 SPG21Q9NZD8 308 aa11.85□□□□□ -0.51
SSX3-204ENST00000612497 NCDNQ9UBB6 729 aa11.85□□□□□ -0.51
SSX3-204ENST00000612497 PCDHA2Q9Y5H9 948 aa11.85□□□□□ -0.51
SSX3-204ENST00000612497 USP24Q9UPU5 2620 aa11.85□□□□□ -0.51
SSX3-204ENST00000612497 ZMYM6O95789 1325 aa11.85□□□□□ -0.51
SSX3-204ENST00000612497 KDM3AQ9Y4C1 1321 aa11.85□□□□□ -0.51
SSX3-204ENST00000612497 EVPLQ92817 2033 aa11.84□□□□□ -0.51
SSX3-204ENST00000612497 NARSO43776 548 aaKnown RBP11.84□□□□□ -0.51
SSX3-204ENST00000612497 RPS6KA5O75582 802 aa11.84□□□□□ -0.51
SSX3-204ENST00000612497 CXCL14O95715 111 aa11.84□□□□□ -0.51
SSX3-204ENST00000612497 TBC1D8BQ0IIM8 1120 aa11.84□□□□□ -0.51
SSX3-204ENST00000612497 LRRC55Q6ZSA7 311 aa11.84□□□□□ -0.51
SSX3-204ENST00000612497 CCDC149Q6ZUS6 474 aa11.84□□□□□ -0.51
SSX3-204ENST00000612497 NME8Q8N427 588 aa11.84□□□□□ -0.51
SSX3-204ENST00000612497 SUMF1Q8NBK3 374 aa11.84□□□□□ -0.51
SSX3-204ENST00000612497 TRAPPC12Q8WVT3 735 aa11.84□□□□□ -0.51
SSX3-204ENST00000612497 FAM227BQ96M60 508 aa11.84□□□□□ -0.51
SSX3-204ENST00000612497 TMEM117Q9H0C3 514 aa11.84□□□□□ -0.51
SSX3-204ENST00000612497 TBC1D17Q9HA65 648 aa11.84□□□□□ -0.51
SSX3-204ENST00000612497 TMEM161AQ9NX61 479 aa11.84□□□□□ -0.51
SSX3-204ENST00000612497 WNT16Q9UBV4 365 aa11.84□□□□□ -0.51
SSX3-204ENST00000612497 CDV3Q9UKY7 258 aaKnown RBP11.84□□□□□ -0.51
SSX3-204ENST00000612497 NOC2LQ9Y3T9 749 aaKnown RBP11.84□□□□□ -0.51
SSX3-204ENST00000612497 FRMPD4Q14CM0 1322 aa11.84□□□□□ -0.51
SSX3-204ENST00000612497 A0A0D9SFI3 127 aa11.83□□□□□ -0.52
SSX3-204ENST00000612497 DCDC2BA2VCK2 349 aa11.83□□□□□ -0.52
SSX3-204ENST00000612497 KRBA1A5PL33 1030 aa11.83□□□□□ -0.52
SSX3-204ENST00000612497 SPDYE4A6NLX3 237 aa11.83□□□□□ -0.52
SSX3-204ENST00000612497 B4E1Z4 1266 aa11.83□□□□□ -0.52
SSX3-204ENST00000612497 ZNF213O14771 459 aa11.83□□□□□ -0.52
SSX3-204ENST00000612497 KINO60870 393 aaKnown RBP11.83□□□□□ -0.52
SSX3-204ENST00000612497 ATP9AO75110 1047 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms