RNA–Protein interactions for RNA: ENST00000612455.1

CCND3-222, Transcript of cyclin D3, human

Gene CCND3, Length 536 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCND3-222	ENST00000612455	LINC01465	Q8N7H1	131 aa		18.81	■□□□□ 0.6
CCND3-222	ENST00000612455	APBB2	Q92870	758 aa		18.81	■□□□□ 0.6
CCND3-222	ENST00000612455	CEP89	Q96ST8	783 aa		18.81	■□□□□ 0.6
CCND3-222	ENST00000612455	FAM49A	Q9H0Q0	323 aa	Predicted RBP	18.81	■□□□□ 0.6
CCND3-222	ENST00000612455	CEP131	Q9UPN4	1083 aa		18.81	■□□□□ 0.6
CCND3-222	ENST00000612455	MAGEB2	O15479	319 aa		18.8	■□□□□ 0.6
CCND3-222	ENST00000612455	BAG4	O95429	457 aa	Known RBP	18.8	■□□□□ 0.6
CCND3-222	ENST00000612455	KCNJ6	P48051	423 aa		18.8	■□□□□ 0.6
CCND3-222	ENST00000612455	DEFB103A	P81534	67 aa		18.8	■□□□□ 0.6
CCND3-222	ENST00000612455	PRKCE	Q02156	737 aa		18.8	■□□□□ 0.6
CCND3-222	ENST00000612455	EPHA7	Q15375	998 aa		18.8	■□□□□ 0.6
CCND3-222	ENST00000612455	XKR3	Q5GH77	459 aa		18.8	■□□□□ 0.6
CCND3-222	ENST00000612455	USP38	Q8NB14	1042 aa		18.8	■□□□□ 0.6
CCND3-222	ENST00000612455	FAM161B	Q96MY7	647 aa		18.8	■□□□□ 0.6
CCND3-222	ENST00000612455	MTMR9	Q96QG7	549 aa		18.8	■□□□□ 0.6
CCND3-222	ENST00000612455	CELF4	Q9BZC1	486 aa	Known RBP	18.8	■□□□□ 0.6
CCND3-222	ENST00000612455	NKX2-4	Q9H2Z4	354 aa		18.8	■□□□□ 0.6
CCND3-222	ENST00000612455	STXBP5L	Q9Y2K9	1186 aa		18.8	■□□□□ 0.6
CCND3-222	ENST00000612455	TRPV2	Q9Y5S1	764 aa		18.8	■□□□□ 0.6
CCND3-222	ENST00000612455	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	18.79	■□□□□ 0.6
CCND3-222	ENST00000612455	P4HB	P07237	508 aa	Known RBP	18.79	■□□□□ 0.6
CCND3-222	ENST00000612455	MYOG	P15173	224 aa		18.79	■□□□□ 0.6
CCND3-222	ENST00000612455	U2AF2	P26368	475 aa	Known RBP eCLIP	18.79	■□□□□ 0.6
CCND3-222	ENST00000612455	PSMC5	P62195	406 aa		18.79	■□□□□ 0.6
CCND3-222	ENST00000612455	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	18.79	■□□□□ 0.6
CCND3-222	ENST00000612455	TRMT1L	Q7Z2T5	733 aa	Known RBP	18.79	■□□□□ 0.6
CCND3-222	ENST00000612455	CDX2	Q99626	313 aa	Predicted RBP	18.79	■□□□□ 0.6
CCND3-222	ENST00000612455	IFIH1	Q9BYX4	1025 aa	Known RBP	18.79	■□□□□ 0.6
CCND3-222	ENST00000612455	AGO3	Q9H9G7	860 aa	Known RBP	18.79	■□□□□ 0.6
CCND3-222	ENST00000612455	KIF28P	B7ZC32	967 aa		18.78	■□□□□ 0.6
CCND3-222	ENST00000612455	GJB5	O95377	273 aa		18.78	■□□□□ 0.6
CCND3-222	ENST00000612455	GHR	P10912	638 aa		18.78	■□□□□ 0.6
CCND3-222	ENST00000612455	QARS	P47897	775 aa	Known RBP	18.78	■□□□□ 0.6
CCND3-222	ENST00000612455	ORC2	Q13416	577 aa	Predicted RBP	18.78	■□□□□ 0.6
CCND3-222	ENST00000612455	GRIN2C	Q14957	1233 aa		18.78	■□□□□ 0.6
CCND3-222	ENST00000612455	TSHZ1	Q6ZSZ6	1077 aa		18.78	■□□□□ 0.6
CCND3-222	ENST00000612455	FAM43B	Q6ZT52	329 aa	Predicted RBP	18.78	■□□□□ 0.6
CCND3-222	ENST00000612455	NOSTRIN	Q8IVI9	506 aa		18.78	■□□□□ 0.6
CCND3-222	ENST00000612455	SLC28A3	Q9HAS3	691 aa		18.78	■□□□□ 0.6
CCND3-222	ENST00000612455	PCDHA12	Q9UN75	941 aa		18.78	■□□□□ 0.6
CCND3-222	ENST00000612455	IGKV6-21	A0A0C4DH24	114 aa		18.77	■□□□□ 0.6
CCND3-222	ENST00000612455		M0QZ92	97 aa		18.77	■□□□□ 0.6
CCND3-222	ENST00000612455	MARCH6	O60337	910 aa		18.77	■□□□□ 0.6
CCND3-222	ENST00000612455	NEMF	O60524	1076 aa		18.77	■□□□□ 0.6
CCND3-222	ENST00000612455	TMEM62	Q0P6H9	643 aa		18.77	■□□□□ 0.6
CCND3-222	ENST00000612455	CALCRL	Q16602	461 aa		18.77	■□□□□ 0.6
CCND3-222	ENST00000612455	EFCAB12	Q6NXP0	572 aa		18.77	■□□□□ 0.6
CCND3-222	ENST00000612455	BANK1	Q8NDB2	785 aa		18.77	■□□□□ 0.6
CCND3-222	ENST00000612455	TOP1MT	Q969P6	601 aa		18.77	■□□□□ 0.6
CCND3-222	ENST00000612455	TMEM60	Q9H2L4	133 aa		18.77	■□□□□ 0.6
CCND3-222	ENST00000612455	CDHR5	Q9HBB8	845 aa		18.77	■□□□□ 0.6
CCND3-222	ENST00000612455	KIF3A	Q9Y496	699 aa		18.77	■□□□□ 0.6
CCND3-222	ENST00000612455	TTC3	P53804	2025 aa		18.76	■□□□□ 0.59
CCND3-222	ENST00000612455	COL6A3	P12111	3177 aa		18.76	■□□□□ 0.59
CCND3-222	ENST00000612455	ENPP3	O14638	875 aa		18.76	■□□□□ 0.59
CCND3-222	ENST00000612455	DKC1	O60832	514 aa	Known RBP eCLIP	18.76	■□□□□ 0.59
CCND3-222	ENST00000612455	GPR32	O75388	356 aa		18.76	■□□□□ 0.59
CCND3-222	ENST00000612455	AMH	P03971	560 aa		18.76	■□□□□ 0.59
CCND3-222	ENST00000612455	TRAPPC10	P48553	1259 aa		18.76	■□□□□ 0.59
CCND3-222	ENST00000612455	CUL4A	Q13619	759 aa		18.76	■□□□□ 0.59
CCND3-222	ENST00000612455	ANO5	Q75V66	913 aa		18.76	■□□□□ 0.59
CCND3-222	ENST00000612455	TMCO2	Q7Z6W1	182 aa	Predicted RBP	18.76	■□□□□ 0.59
CCND3-222	ENST00000612455	C4orf19	Q8IY42	314 aa		18.76	■□□□□ 0.59
CCND3-222	ENST00000612455	ZNF710	Q8N1W2	664 aa		18.76	■□□□□ 0.59
CCND3-222	ENST00000612455	RAD9A	Q99638	391 aa		18.76	■□□□□ 0.59
CCND3-222	ENST00000612455	HSD17B14	Q9BPX1	270 aa		18.76	■□□□□ 0.59
CCND3-222	ENST00000612455	TTC12	Q9H892	705 aa	Predicted RBP	18.76	■□□□□ 0.59
CCND3-222	ENST00000612455	WRAP73	Q9P2S5	460 aa	Predicted RBP	18.76	■□□□□ 0.59
CCND3-222	ENST00000612455	CHD7	Q9P2D1	2997 aa		18.76	■□□□□ 0.59
CCND3-222	ENST00000612455	CDH23	Q9H251	3354 aa		18.75	■□□□□ 0.59
CCND3-222	ENST00000612455	DDX11L8	A8MPP1	907 aa		18.75	■□□□□ 0.59
CCND3-222	ENST00000612455	TLL1	O43897	1013 aa		18.75	■□□□□ 0.59
CCND3-222	ENST00000612455	SLITRK3	O94933	977 aa		18.75	■□□□□ 0.59
CCND3-222	ENST00000612455	CA3	P07451	260 aa		18.75	■□□□□ 0.59
CCND3-222	ENST00000612455	ATP2B1	P20020	1258 aa		18.75	■□□□□ 0.59
CCND3-222	ENST00000612455	GJB2	P29033	226 aa		18.75	■□□□□ 0.59
CCND3-222	ENST00000612455	CD52	P31358	61 aa		18.75	■□□□□ 0.59
CCND3-222	ENST00000612455	HTRA4	P83105	476 aa	Predicted RBP	18.75	■□□□□ 0.59
CCND3-222	ENST00000612455	RTN4RL1	Q86UN2	441 aa	Predicted RBP	18.75	■□□□□ 0.59
CCND3-222	ENST00000612455	METTL13	Q8N6R0	699 aa		18.75	■□□□□ 0.59
CCND3-222	ENST00000612455	C4orf32	Q8N8J7	132 aa		18.75	■□□□□ 0.59
CCND3-222	ENST00000612455	RGL1	Q9NZL6	768 aa		18.75	■□□□□ 0.59
CCND3-222	ENST00000612455	PADI3	Q9ULW8	664 aa		18.75	■□□□□ 0.59
CCND3-222	ENST00000612455	TMEM150B	A6NC51	233 aa		18.74	■□□□□ 0.59
CCND3-222	ENST00000612455	MAF	O75444	373 aa	Predicted RBP	18.74	■□□□□ 0.59
CCND3-222	ENST00000612455	ARHGEF15	O94989	841 aa		18.74	■□□□□ 0.59
CCND3-222	ENST00000612455	LYPLA2	O95372	231 aa		18.74	■□□□□ 0.59
CCND3-222	ENST00000612455	TMOD1	P28289	359 aa		18.74	■□□□□ 0.59
CCND3-222	ENST00000612455	MCM7	P33993	719 aa		18.74	■□□□□ 0.59
CCND3-222	ENST00000612455	TXK	P42681	527 aa		18.74	■□□□□ 0.59
CCND3-222	ENST00000612455	TOB1	P50616	345 aa	Predicted RBP	18.74	■□□□□ 0.59
CCND3-222	ENST00000612455	CLCN3	P51790	818 aa		18.74	■□□□□ 0.59
CCND3-222	ENST00000612455	CRYBB1	P53674	252 aa	Predicted RBP	18.74	■□□□□ 0.59
CCND3-222	ENST00000612455	TAP1	Q03518	808 aa		18.74	■□□□□ 0.59
CCND3-222	ENST00000612455	TBC1D8B	Q0IIM8	1120 aa		18.74	■□□□□ 0.59
CCND3-222	ENST00000612455	ZNF174	Q15697	407 aa		18.74	■□□□□ 0.59
CCND3-222	ENST00000612455	NCAPH2	Q6IBW4	605 aa		18.74	■□□□□ 0.59
CCND3-222	ENST00000612455	MYLIP	Q8WY64	445 aa		18.74	■□□□□ 0.59
CCND3-222	ENST00000612455	DYDC2	Q96IM9	177 aa		18.74	■□□□□ 0.59
CCND3-222	ENST00000612455	ZBED2	Q9BTP6	218 aa		18.74	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms