RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 ZSCAN26Q16670 478 aa16.14■□□□□ 0.17
CDH1-213ENST00000612417 AENQ8WTP8 325 aaKnown RBP16.14■□□□□ 0.17
CDH1-213ENST00000612417 NOX5Q96PH1 765 aa16.14■□□□□ 0.17
CDH1-213ENST00000612417 LUC7LQ9NQ29 371 aaKnown RBP16.14■□□□□ 0.17
CDH1-213ENST00000612417 SALL4Q9UJQ4 1053 aa16.14■□□□□ 0.17
CDH1-213ENST00000612417 SSC5DA1L4H1 1573 aa16.13■□□□□ 0.17
CDH1-213ENST00000612417 MED24O75448 989 aa16.13■□□□□ 0.17
CDH1-213ENST00000612417 RPS6KA5O75582 802 aa16.13■□□□□ 0.17
CDH1-213ENST00000612417 PRPF6O94906 941 aaKnown RBP16.13■□□□□ 0.17
CDH1-213ENST00000612417 ICAM1P05362 532 aa16.13■□□□□ 0.17
CDH1-213ENST00000612417 ACTN2P35609 894 aa16.13■□□□□ 0.17
CDH1-213ENST00000612417 HMGCS2P54868 508 aa16.13■□□□□ 0.17
CDH1-213ENST00000612417 Q4G0T1 1027 aa16.13■□□□□ 0.17
CDH1-213ENST00000612417 PRR16Q569H4 304 aa16.13■□□□□ 0.17
CDH1-213ENST00000612417 ARSHQ5FYA8 562 aa16.13■□□□□ 0.17
CDH1-213ENST00000612417 HERC4Q5GLZ8 1057 aaPredicted RBP16.13■□□□□ 0.17
CDH1-213ENST00000612417 SELENOOQ9BVL4 669 aa16.13■□□□□ 0.17
CDH1-213ENST00000612417 LSM14BQ9BX40 385 aaKnown RBP16.13■□□□□ 0.17
CDH1-213ENST00000612417 TLR10Q9BXR5 811 aa16.13■□□□□ 0.17
CDH1-213ENST00000612417 STK24Q9Y6E0 443 aa16.13■□□□□ 0.17
CDH1-213ENST00000612417 MYBL2P10244 700 aa16.12■□□□□ 0.17
CDH1-213ENST00000612417 ERCC3P19447 782 aa16.12■□□□□ 0.17
CDH1-213ENST00000612417 SREBF1P36956 1147 aa16.12■□□□□ 0.17
CDH1-213ENST00000612417 TNNT3P45378 269 aaPredicted RBP16.12■□□□□ 0.17
CDH1-213ENST00000612417 TDRD12Q587J7 1177 aaKnown RBP16.12■□□□□ 0.17
CDH1-213ENST00000612417 KLHDC7AQ5VTJ3 777 aa16.12■□□□□ 0.17
CDH1-213ENST00000612417 NFRKBQ6P4R8 1299 aa16.12■□□□□ 0.17
CDH1-213ENST00000612417 AIPL1Q9NZN9 384 aa16.12■□□□□ 0.17
CDH1-213ENST00000612417 TBC1D7Q9P0N9 293 aa16.12■□□□□ 0.17
CDH1-213ENST00000612417 RNF14Q9UBS8 474 aa16.12■□□□□ 0.17
CDH1-213ENST00000612417 PPP1R9AQ9ULJ8 1098 aa16.12■□□□□ 0.17
CDH1-213ENST00000612417 PPP1R12BO60237 982 aaPredicted RBP16.12■□□□□ 0.17
CDH1-213ENST00000612417 ZBED4O75132 1171 aa16.12■□□□□ 0.17
CDH1-213ENST00000612417 ALAS1P13196 640 aa16.12■□□□□ 0.17
CDH1-213ENST00000612417 RAVER2Q9HCJ3 691 aaKnown RBP16.12■□□□□ 0.17
CDH1-213ENST00000612417 NLRC4Q9NPP4 1024 aa16.12■□□□□ 0.17
CDH1-213ENST00000612417 NPHP3-ACAD11A0A0J9YXS1 232 aa16.11■□□□□ 0.17
CDH1-213ENST00000612417 C19orf81C9J6K1 198 aa16.11■□□□□ 0.17
CDH1-213ENST00000612417 RNF40O75150 1001 aa16.11■□□□□ 0.17
CDH1-213ENST00000612417 RPA1P27694 616 aa16.11■□□□□ 0.17
CDH1-213ENST00000612417 TNFRSF8P28908 595 aa16.11■□□□□ 0.17
CDH1-213ENST00000612417 EPHX2P34913 555 aa16.11■□□□□ 0.17
CDH1-213ENST00000612417 POLR2FP61218 127 aaKnown RBP16.11■□□□□ 0.17
CDH1-213ENST00000612417 SLC18A3Q16572 532 aa16.11■□□□□ 0.17
CDH1-213ENST00000612417 NELFCDQ8IXH7 590 aa16.11■□□□□ 0.17
CDH1-213ENST00000612417 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.11■□□□□ 0.17
CDH1-213ENST00000612417 ERMNQ8TAM6 284 aa16.11■□□□□ 0.17
CDH1-213ENST00000612417 LENG9Q96B70 501 aa16.11■□□□□ 0.17
CDH1-213ENST00000612417 DRC1Q96MC2 740 aa16.11■□□□□ 0.17
CDH1-213ENST00000612417 GANQ9H2C0 597 aa16.11■□□□□ 0.17
CDH1-213ENST00000612417 EHMT1Q9H9B1 1298 aa16.11■□□□□ 0.17
CDH1-213ENST00000612417 HOMER2Q9NSB8 354 aa16.11■□□□□ 0.17
CDH1-213ENST00000612417 TMOD4Q9NZQ9 345 aa16.11■□□□□ 0.17
CDH1-213ENST00000612417 TRAF3IP3Q9Y228 551 aa16.11■□□□□ 0.17
CDH1-213ENST00000612417 PHIPQ8WWQ0 1821 aa16.11■□□□□ 0.17
CDH1-213ENST00000612417 ZNF536O15090 1300 aa16.11■□□□□ 0.17
CDH1-213ENST00000612417 POTEFA5A3E0 1075 aa16.1■□□□□ 0.17
CDH1-213ENST00000612417 CETN3O15182 167 aa16.1■□□□□ 0.17
CDH1-213ENST00000612417 ZMYND10O75800 440 aa16.1■□□□□ 0.17
CDH1-213ENST00000612417 POTEIP0CG38 1075 aa16.1■□□□□ 0.17
CDH1-213ENST00000612417 STAT3P40763 770 aa16.1■□□□□ 0.17
CDH1-213ENST00000612417 ADAM9Q13443 819 aa16.1■□□□□ 0.17
CDH1-213ENST00000612417 NAB2Q15742 525 aa16.1■□□□□ 0.17
CDH1-213ENST00000612417 NOL9Q5SY16 702 aaKnown RBP16.1■□□□□ 0.17
CDH1-213ENST00000612417 POTEGQ6S5H5 508 aa16.1■□□□□ 0.17
CDH1-213ENST00000612417 POTEEQ6S8J3 1075 aa16.1■□□□□ 0.17
CDH1-213ENST00000612417 USP50Q70EL3 339 aaPredicted RBP16.1■□□□□ 0.17
CDH1-213ENST00000612417 EPM2AIP1Q7L775 607 aaPredicted RBP16.1■□□□□ 0.17
CDH1-213ENST00000612417 CATSPER3Q86XQ3 398 aa16.1■□□□□ 0.17
CDH1-213ENST00000612417 SYT2Q8N9I0 419 aaPredicted RBP16.1■□□□□ 0.17
CDH1-213ENST00000612417 FAM20AQ96MK3 541 aa16.1■□□□□ 0.17
CDH1-213ENST00000612417 CRACR2AQ9BSW2 395 aa16.1■□□□□ 0.17
CDH1-213ENST00000612417 LRRC1Q9BTT6 524 aa16.1■□□□□ 0.17
CDH1-213ENST00000612417 FAM204AQ9H8W3 233 aa16.1■□□□□ 0.17
CDH1-213ENST00000612417 SLC38A10Q9HBR0 1119 aa16.1■□□□□ 0.17
CDH1-213ENST00000612417 CSADQ9Y600 493 aa16.1■□□□□ 0.17
CDH1-213ENST00000612417 CAPN2P17655 700 aa16.1■□□□□ 0.17
CDH1-213ENST00000612417 CIITAP33076 1130 aa16.1■□□□□ 0.17
CDH1-213ENST00000612417 PAFAH1B1P43034 410 aa16.1■□□□□ 0.17
CDH1-213ENST00000612417 UBXN2AP68543 259 aa16.1■□□□□ 0.17
CDH1-213ENST00000612417 VGLL4Q14135 290 aa16.1■□□□□ 0.17
CDH1-213ENST00000612417 GIT2Q14161 759 aa16.1■□□□□ 0.17
CDH1-213ENST00000612417 GLE1Q53GS7 698 aaKnown RBP16.1■□□□□ 0.17
CDH1-213ENST00000612417 EAPPQ56P03 285 aaPredicted RBP16.1■□□□□ 0.17
CDH1-213ENST00000612417 FRMD5Q7Z6J6 570 aa16.1■□□□□ 0.17
CDH1-213ENST00000612417 KCTD17Q8N5Z5 321 aa16.1■□□□□ 0.17
CDH1-213ENST00000612417 L3MBTL3Q96JM7 780 aaPredicted RBP16.1■□□□□ 0.17
CDH1-213ENST00000612417 PLCB1Q9NQ66 1216 aa16.1■□□□□ 0.17
CDH1-213ENST00000612417 CWC15Q9P013 229 aaKnown RBP16.1■□□□□ 0.17
CDH1-213ENST00000612417 PCDHGC5Q9Y5F6 944 aa16.1■□□□□ 0.17
CDH1-213ENST00000612417 FAM86B1E9PN63 330 aa16.09■□□□□ 0.17
CDH1-213ENST00000612417 TULP2O00295 520 aa16.09■□□□□ 0.17
CDH1-213ENST00000612417 KRT18P05783 430 aaKnown RBP16.09■□□□□ 0.17
CDH1-213ENST00000612417 FAM86B2P0C5J1 330 aa16.09■□□□□ 0.17
CDH1-213ENST00000612417 SPATA31C1P0DKV0 1188 aa16.09■□□□□ 0.17
CDH1-213ENST00000612417 CACNB1Q02641 598 aaPredicted RBP16.09■□□□□ 0.17
CDH1-213ENST00000612417 KCNH2Q12809 1159 aa16.09■□□□□ 0.17
CDH1-213ENST00000612417 TTLL12Q14166 644 aaPredicted RBP16.09■□□□□ 0.17
CDH1-213ENST00000612417 CCDC181Q5TID7 509 aa16.09■□□□□ 0.17
CDH1-213ENST00000612417 LEKR1Q6ZMV7 388 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms