RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 NT5C3AQ9H0P0 336 aa8.58□□□□□ -1.04
MSH6-211ENST00000606499 BHMT2Q9H2M3 363 aa8.58□□□□□ -1.04
MSH6-211ENST00000606499 BMP2KQ9NSY1 1161 aaPredicted RBP8.58□□□□□ -1.04
MSH6-211ENST00000606499 BLOC1S4Q9NUP1 217 aa8.58□□□□□ -1.04
MSH6-211ENST00000606499 CCDC39Q9UFE4 941 aa8.58□□□□□ -1.04
MSH6-211ENST00000606499 ARHGEF35A5YM69 484 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 SLC26A4O43511 780 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 ACTN4O43707 911 aaKnown RBP8.57□□□□□ -1.04
MSH6-211ENST00000606499 NR1I2O75469 434 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 CABYRO75952 493 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 EYA4O95677 639 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 SSBP05455 408 aaKnown RBP eCLIP8.57□□□□□ -1.04
MSH6-211ENST00000606499 PLA2G4BP0C869 781 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 COL6A1P12109 1028 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 INSRRP14616 1297 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 SYKP43405 635 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 RARRES1P49788 294 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 SOX10P56693 466 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 FAM160A1Q05DH4 1040 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 PPFIA1Q13136 1202 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 SNW1Q13573 536 aaKnown RBP8.57□□□□□ -1.04
MSH6-211ENST00000606499 ITGA7Q13683 1181 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 MCM6Q14566 821 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 TARBP2Q15633 366 aaKnown RBP8.57□□□□□ -1.04
MSH6-211ENST00000606499 GRIK4Q16099 956 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 LONRF3Q496Y0 759 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 XKR9Q5GH70 373 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 FAM47CQ5HY64 1035 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 GRAMD1CQ8IYS0 662 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 TNS4Q8IZW8 715 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 C7orf31Q8N865 590 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 ANKLE1Q8NAG6 615 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 ENGASEQ8NFI3 743 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 GPT2Q8TD30 523 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 LMBR1Q8WVP7 490 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 LARP4BQ92615 738 aaKnown RBP8.57□□□□□ -1.04
MSH6-211ENST00000606499 RAD54LQ92698 747 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 STAMQ92783 540 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 VTI1AQ96AJ9 217 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 PAWRQ96IZ0 340 aaKnown RBP8.57□□□□□ -1.04
MSH6-211ENST00000606499 CEP170P1Q96L14 293 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 CCDC43Q96MW1 224 aaKnown RBP8.57□□□□□ -1.04
MSH6-211ENST00000606499 CEP89Q96ST8 783 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 SENP6Q9GZR1 1112 aaPredicted RBP8.57□□□□□ -1.04
MSH6-211ENST00000606499 STARD7Q9NQZ5 370 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 CYP26B1Q9NR63 512 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 NRBP2Q9NSY0 501 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 ANKEF1Q9NU02 776 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 SETD4Q9NVD3 440 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 HDAC6Q9UBN7 1215 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 STK17AQ9UEE5 414 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 SERTAD1Q9UHV2 236 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 DBR1Q9UK59 544 aaKnown RBP8.57□□□□□ -1.04
MSH6-211ENST00000606499 DNM3Q9UQ16 869 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 COL1A2P08123 1366 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 TANC1Q9C0D5 1861 aa8.57□□□□□ -1.04
MSH6-211ENST00000606499 TRIP12Q14669 1992 aaPredicted RBP8.57□□□□□ -1.04
MSH6-211ENST00000606499 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.56□□□□□ -1.04
MSH6-211ENST00000606499 A0A0U1RQG5 324 aaPredicted RBP8.56□□□□□ -1.04
MSH6-211ENST00000606499 HBP1O60381 514 aa8.56□□□□□ -1.04
MSH6-211ENST00000606499 USO1O60763 962 aaKnown RBP8.56□□□□□ -1.04
MSH6-211ENST00000606499 C22orf31O95567 290 aa8.56□□□□□ -1.04
MSH6-211ENST00000606499 HOXC8P31273 242 aa8.56□□□□□ -1.04
MSH6-211ENST00000606499 ATN1P54259 1190 aaPredicted RBP8.56□□□□□ -1.04
MSH6-211ENST00000606499 SLC12A3P55017 1021 aa8.56□□□□□ -1.04
MSH6-211ENST00000606499 ZNF200P98182 395 aaPredicted RBP8.56□□□□□ -1.04
MSH6-211ENST00000606499 RAD51AP2Q09MP3 1159 aa8.56□□□□□ -1.04
MSH6-211ENST00000606499 ZNF484Q5JVG2 852 aa8.56□□□□□ -1.04
MSH6-211ENST00000606499 MARCH8Q5T0T0 291 aa8.56□□□□□ -1.04
MSH6-211ENST00000606499 GDF6Q6KF10 455 aaPredicted RBP8.56□□□□□ -1.04
MSH6-211ENST00000606499 OTUD6AQ7L8S5 288 aa8.56□□□□□ -1.04
MSH6-211ENST00000606499 GPBP1Q86WP2 473 aa8.56□□□□□ -1.04
MSH6-211ENST00000606499 IQUBQ8NA54 791 aa8.56□□□□□ -1.04
MSH6-211ENST00000606499 RUSC1Q9BVN2 902 aa8.56□□□□□ -1.04
MSH6-211ENST00000606499 NIFKQ9BYG3 293 aaKnown RBP8.56□□□□□ -1.04
MSH6-211ENST00000606499 C11orf49Q9H6J7 331 aa8.56□□□□□ -1.04
MSH6-211ENST00000606499 DACT1Q9NYF0 836 aa8.56□□□□□ -1.04
MSH6-211ENST00000606499 GTF2IRD1Q9UHL9 959 aa8.56□□□□□ -1.04
MSH6-211ENST00000606499 TUBE1Q9UJT0 475 aa8.56□□□□□ -1.04
MSH6-211ENST00000606499 KAT6AQ92794 2004 aa8.56□□□□□ -1.04
MSH6-211ENST00000606499 LAMA2P24043 3122 aaKnown RBP8.56□□□□□ -1.04
MSH6-211ENST00000606499 NRCAMQ92823 1304 aa8.55□□□□□ -1.04
MSH6-211ENST00000606499 MYH11P35749 1972 aa8.55□□□□□ -1.04
MSH6-211ENST00000606499 EVPLQ92817 2033 aa8.55□□□□□ -1.04
MSH6-211ENST00000606499 NPHP3-ACAD11A0A0J9YXS1 232 aa8.55□□□□□ -1.04
MSH6-211ENST00000606499 C17orf102A2RUQ5 167 aa8.55□□□□□ -1.04
MSH6-211ENST00000606499 CCDC85CA6NKD9 419 aa8.55□□□□□ -1.04
MSH6-211ENST00000606499 RBAK-RBAKDNI3L0D1 243 aa8.55□□□□□ -1.04
MSH6-211ENST00000606499 TREHO43280 583 aa8.55□□□□□ -1.04
MSH6-211ENST00000606499 ZNF202O95125 648 aa8.55□□□□□ -1.04
MSH6-211ENST00000606499 SLFN14P0C7P3 912 aa8.55□□□□□ -1.04
MSH6-211ENST00000606499 PRR29P0C7W0 189 aa8.55□□□□□ -1.04
MSH6-211ENST00000606499 XRCC6P12956 609 aaKnown RBP eCLIP8.55□□□□□ -1.04
MSH6-211ENST00000606499 KLRC1P26715 233 aa8.55□□□□□ -1.04
MSH6-211ENST00000606499 CASP1P29466 404 aa8.55□□□□□ -1.04
MSH6-211ENST00000606499 AFMP43652 599 aa8.55□□□□□ -1.04
MSH6-211ENST00000606499 POLGP54098 1239 aaPredicted RBP8.55□□□□□ -1.04
MSH6-211ENST00000606499 ADAM17P78536 824 aa8.55□□□□□ -1.04
MSH6-211ENST00000606499 TBC1D8BQ0IIM8 1120 aa8.55□□□□□ -1.04
MSH6-211ENST00000606499 EMC2Q15006 297 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms