RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 CTTNQ14247 550 aaKnown RBP15.97■□□□□ 0.15
CTSA-211ENST00000606066 MARCH8Q5T0T0 291 aa15.97■□□□□ 0.15
CTSA-211ENST00000606066 KRT79Q5XKE5 535 aa15.97■□□□□ 0.15
CTSA-211ENST00000606066 ATL3Q6DD88 541 aa15.97■□□□□ 0.15
CTSA-211ENST00000606066 MFSD5Q6N075 450 aa15.97■□□□□ 0.15
CTSA-211ENST00000606066 MTHFD1LQ6UB35 978 aa15.97■□□□□ 0.15
CTSA-211ENST00000606066 IGSF22Q8N9C0 903 aa15.97■□□□□ 0.15
CTSA-211ENST00000606066 MAFAQ8NHW3 353 aaPredicted RBP15.97■□□□□ 0.15
CTSA-211ENST00000606066 AK8Q96MA6 479 aa15.97■□□□□ 0.15
CTSA-211ENST00000606066 CTAGE1Q96RT6 745 aa15.97■□□□□ 0.15
CTSA-211ENST00000606066 POLR3CQ9BUI4 534 aaPredicted RBP15.97■□□□□ 0.15
CTSA-211ENST00000606066 PPME1Q9Y570 386 aa15.97■□□□□ 0.15
CTSA-211ENST00000606066 PCDHA2Q9Y5H9 948 aa15.97■□□□□ 0.15
CTSA-211ENST00000606066 ATP6V1DQ9Y5K8 247 aa15.97■□□□□ 0.15
CTSA-211ENST00000606066 CLIC4Q9Y696 253 aa15.97■□□□□ 0.15
CTSA-211ENST00000606066 VWA3AA6NCI4 1184 aa15.96■□□□□ 0.15
CTSA-211ENST00000606066 PARNO95453 639 aaKnown RBP15.96■□□□□ 0.15
CTSA-211ENST00000606066 XRCC6P12956 609 aaKnown RBP eCLIP15.96■□□□□ 0.15
CTSA-211ENST00000606066 MUTP22033 750 aa15.96■□□□□ 0.15
CTSA-211ENST00000606066 ITGB8P26012 769 aa15.96■□□□□ 0.15
CTSA-211ENST00000606066 KLRC1P26715 233 aa15.96■□□□□ 0.15
CTSA-211ENST00000606066 RPA1P27694 616 aa15.96■□□□□ 0.15
CTSA-211ENST00000606066 YWHABP31946 246 aaKnown RBP15.96■□□□□ 0.15
CTSA-211ENST00000606066 THPOP40225 353 aa15.96■□□□□ 0.15
CTSA-211ENST00000606066 NUCB2P80303 420 aa15.96■□□□□ 0.15
CTSA-211ENST00000606066 CEBPZQ03701 1054 aaKnown RBP15.96■□□□□ 0.15
CTSA-211ENST00000606066 RBL2Q08999 1139 aa15.96■□□□□ 0.15
CTSA-211ENST00000606066 RPAINQ86UA6 219 aa15.96■□□□□ 0.15
CTSA-211ENST00000606066 EXOC8Q8IYI6 725 aa15.96■□□□□ 0.15
CTSA-211ENST00000606066 USP28Q96RU2 1077 aa15.96■□□□□ 0.15
CTSA-211ENST00000606066 CFAP45Q9UL16 551 aa15.96■□□□□ 0.15
CTSA-211ENST00000606066 SMIM35A0A1B0GVV1 85 aa15.95■□□□□ 0.14
CTSA-211ENST00000606066 STBD1O95210 358 aa15.95■□□□□ 0.14
CTSA-211ENST00000606066 CKBP12277 381 aa15.95■□□□□ 0.14
CTSA-211ENST00000606066 SELPP16109 830 aa15.95■□□□□ 0.14
CTSA-211ENST00000606066 TMOD1P28289 359 aa15.95■□□□□ 0.14
CTSA-211ENST00000606066 CYP2C18P33260 490 aa15.95■□□□□ 0.14
CTSA-211ENST00000606066 LONP1P36776 959 aaKnown RBP15.95■□□□□ 0.14
CTSA-211ENST00000606066 CCT6AP40227 531 aaKnown RBP15.95■□□□□ 0.14
CTSA-211ENST00000606066 TBC1D8BQ0IIM8 1120 aa15.95■□□□□ 0.14
CTSA-211ENST00000606066 PTPAQ15257 358 aa15.95■□□□□ 0.14
CTSA-211ENST00000606066 IL17AQ16552 155 aa15.95■□□□□ 0.14
CTSA-211ENST00000606066 MTERF2Q49AM1 385 aa15.95■□□□□ 0.14
CTSA-211ENST00000606066 ANO5Q75V66 913 aa15.95■□□□□ 0.14
CTSA-211ENST00000606066 CATSPER3Q86XQ3 398 aa15.95■□□□□ 0.14
CTSA-211ENST00000606066 NME8Q8N427 588 aa15.95■□□□□ 0.14
CTSA-211ENST00000606066 SNX29Q8TEQ0 813 aa15.95■□□□□ 0.14
CTSA-211ENST00000606066 TRAPPC12Q8WVT3 735 aa15.95■□□□□ 0.14
CTSA-211ENST00000606066 DHX38Q92620 1227 aaKnown RBP15.95■□□□□ 0.14
CTSA-211ENST00000606066 CEP170P1Q96L14 293 aa15.95■□□□□ 0.14
CTSA-211ENST00000606066 CCDC43Q96MW1 224 aaKnown RBP15.95■□□□□ 0.14
CTSA-211ENST00000606066 NACC1Q96RE7 527 aa15.95■□□□□ 0.14
CTSA-211ENST00000606066 JPH2Q9BR39 696 aaPredicted RBP15.95■□□□□ 0.14
CTSA-211ENST00000606066 ANKEF1Q9NU02 776 aa15.95■□□□□ 0.14
CTSA-211ENST00000606066 MORC2Q9Y6X9 1032 aaPredicted RBP15.95■□□□□ 0.14
CTSA-211ENST00000606066 MUC3AQ02505 3323 aa15.95■□□□□ 0.14
CTSA-211ENST00000606066 ZBTB42B2RXF5 422 aa15.94■□□□□ 0.14
CTSA-211ENST00000606066 IQCF3P0C7M6 154 aa15.94■□□□□ 0.14
CTSA-211ENST00000606066 SPATA31C1P0DKV0 1188 aa15.94■□□□□ 0.14
CTSA-211ENST00000606066 RFC2P35250 354 aa15.94■□□□□ 0.14
CTSA-211ENST00000606066 NASPP49321 788 aaPredicted RBP15.94■□□□□ 0.14
CTSA-211ENST00000606066 EPHB4P54760 987 aa15.94■□□□□ 0.14
CTSA-211ENST00000606066 CCL23P55773 120 aa15.94■□□□□ 0.14
CTSA-211ENST00000606066 FPGSQ05932 587 aa15.94■□□□□ 0.14
CTSA-211ENST00000606066 PPIGQ13427 754 aaKnown RBP eCLIP15.94■□□□□ 0.144e-6■■■■□ 20
CTSA-211ENST00000606066 SLC39A14Q15043 492 aa15.94■□□□□ 0.14
CTSA-211ENST00000606066 STK38Q15208 465 aa15.94■□□□□ 0.14
CTSA-211ENST00000606066 TARBP2Q15633 366 aaKnown RBP15.94■□□□□ 0.14
CTSA-211ENST00000606066 TRIM71Q2Q1W2 868 aaKnown RBP15.94■□□□□ 0.14
CTSA-211ENST00000606066 LRRC8DQ7L1W4 858 aa15.94■□□□□ 0.14
CTSA-211ENST00000606066 KCTD17Q8N5Z5 321 aa15.94■□□□□ 0.14
CTSA-211ENST00000606066 METTL13Q8N6R0 699 aa15.94■□□□□ 0.14
CTSA-211ENST00000606066 FTOQ9C0B1 505 aaKnown RBP eCLIP15.94■□□□□ 0.14
CTSA-211ENST00000606066 CYP26B1Q9NR63 512 aa15.94■□□□□ 0.14
CTSA-211ENST00000606066 WRAP73Q9P2S5 460 aaPredicted RBP15.94■□□□□ 0.14
CTSA-211ENST00000606066 UMODL1Q5DID0 1318 aa15.94■□□□□ 0.14
CTSA-211ENST00000606066 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.93■□□□□ 0.14
CTSA-211ENST00000606066 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.93■□□□□ 0.14
CTSA-211ENST00000606066 RSPH10B2B2RC85 870 aa15.93■□□□□ 0.14
CTSA-211ENST00000606066 M0QZ92 97 aa15.93■□□□□ 0.14
CTSA-211ENST00000606066 SLC26A4O43511 780 aa15.93■□□□□ 0.14
CTSA-211ENST00000606066 MED24O75448 989 aa15.93■□□□□ 0.14
CTSA-211ENST00000606066 C22orf31O95567 290 aa15.93■□□□□ 0.14
CTSA-211ENST00000606066 YEATS4O95619 227 aa15.93■□□□□ 0.14
CTSA-211ENST00000606066 RSPH10BP0C881 870 aa15.93■□□□□ 0.14
CTSA-211ENST00000606066 RFC5P40937 340 aa15.93■□□□□ 0.14
CTSA-211ENST00000606066 UBA7P41226 1012 aa15.93■□□□□ 0.14
CTSA-211ENST00000606066 DNM2P50570 870 aa15.93■□□□□ 0.14
CTSA-211ENST00000606066 FOXD4L6Q3SYB3 417 aaPredicted RBP15.93■□□□□ 0.14
CTSA-211ENST00000606066 XKR9Q5GH70 373 aa15.93■□□□□ 0.14
CTSA-211ENST00000606066 IER5Q5VY09 327 aa15.93■□□□□ 0.14
CTSA-211ENST00000606066 FOXD4L3Q6VB84 417 aaPredicted RBP15.93■□□□□ 0.14
CTSA-211ENST00000606066 RUFY4Q6ZNE9 571 aa15.93■□□□□ 0.14
CTSA-211ENST00000606066 RPUSD2Q8IZ73 545 aaKnown RBP15.93■□□□□ 0.14
CTSA-211ENST00000606066 ZNF710Q8N1W2 664 aa15.93■□□□□ 0.14
CTSA-211ENST00000606066 LINC00301Q8NCQ3 95 aa15.93■□□□□ 0.14
CTSA-211ENST00000606066 DNAJB3Q8WWF6 145 aa15.93■□□□□ 0.14
CTSA-211ENST00000606066 SLC7A3Q8WY07 619 aa15.93■□□□□ 0.14
CTSA-211ENST00000606066 MYLIPQ8WY64 445 aa15.93■□□□□ 0.14
CTSA-211ENST00000606066 WNT8BQ93098 351 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms