RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 DNM3Q9UQ16 869 aa4.77□□□□□ -1.65
IGHV3-29-201ENST00000604817 PCDHB12Q9Y5F1 795 aa4.77□□□□□ -1.65
IGHV3-29-201ENST00000604817 PCDHGA9Q9Y5G4 932 aaKnown RBP4.77□□□□□ -1.65
IGHV3-29-201ENST00000604817 PCDHGA8Q9Y5G5 932 aa4.77□□□□□ -1.65
IGHV3-29-201ENST00000604817 PCDHGA7Q9Y5G6 932 aa4.77□□□□□ -1.65
IGHV3-29-201ENST00000604817 PCDHGA6Q9Y5G7 932 aa4.77□□□□□ -1.65
IGHV3-29-201ENST00000604817 PCDHGA3Q9Y5H0 932 aa4.77□□□□□ -1.65
IGHV3-29-201ENST00000604817 PCDHGA2Q9Y5H1 932 aa4.77□□□□□ -1.65
IGHV3-29-201ENST00000604817 NCANO14594 1321 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 PITPNM2Q9BZ72 1349 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 LRP6O75581 1613 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 A6NNZ2 444 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 B4E1Z4 1266 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 CBX4O00257 560 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 NOP56O00567 594 aaKnown RBP4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 ZNF865P0CJ78 1059 aaPredicted RBP4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 SETSIPP0DME0 302 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 ZSCAN22P10073 491 aaPredicted RBP4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 ITGA4P13612 1032 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 SLC5A1P13866 664 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 CD247P20963 164 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 CASP2P42575 452 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 AK2P54819 239 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 IL2P60568 153 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 KRT85P78386 507 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 RBM10P98175 930 aaKnown RBP4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 ADCY1Q08828 1119 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 FAPQ12884 760 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 SF1Q15637 639 aaKnown RBP4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 SFRP5Q5T4F7 317 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 L1TD1Q5T7N2 865 aaKnown RBP4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 MMS22LQ6ZRQ5 1243 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 LCNL1Q6ZST4 164 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 SRLQ86TD4 932 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 FAM186BQ8IYM0 893 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 CLASRPQ8N2M8 674 aaKnown RBP4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 FBXO15Q8NCQ5 510 aaPredicted RBP4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 SLC35G2Q8TBE7 412 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 PIWIL2Q8TC59 973 aaKnown RBP4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 HSPBAP1Q96EW2 488 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 TNIP3Q96KP6 325 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 SCLT1Q96NL6 688 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 MYD88Q99836 296 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 KRTAP4-5Q9BYR2 181 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 C19orf44Q9H6X5 657 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 EMC7Q9NPA0 242 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 C1orf112Q9NSG2 853 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 PGAP2Q9UHJ9 254 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 TPX2Q9ULW0 747 aaKnown RBP4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 DMTF1Q9Y222 760 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 EMC9Q9Y3B6 208 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 FHOD1Q9Y613 1164 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 NCOA3Q9Y6Q9 1424 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 DGKBQ9Y6T7 804 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 ABCC3O15438 1527 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 PRDM15P57071 1507 aaPredicted RBP4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 TMEM2Q9UHN6 1383 aa4.76□□□□□ -1.65
IGHV3-29-201ENST00000604817 COL16A1Q07092 1604 aaPredicted RBP4.75□□□□□ -1.65
IGHV3-29-201ENST00000604817 ERVK-7P63135 1459 aa4.75□□□□□ -1.65
IGHV3-29-201ENST00000604817 PRRG2O14669 202 aa4.75□□□□□ -1.65
IGHV3-29-201ENST00000604817 GLRX3O76003 335 aaKnown RBP4.75□□□□□ -1.65
IGHV3-29-201ENST00000604817 ZRANB2O95218 330 aaKnown RBP eCLIP4.75□□□□□ -1.65
IGHV3-29-201ENST00000604817 CRTAMO95727 393 aa4.75□□□□□ -1.65
IGHV3-29-201ENST00000604817 LSSP48449 732 aa4.75□□□□□ -1.65
IGHV3-29-201ENST00000604817 RENBPP51606 427 aa4.75□□□□□ -1.65
IGHV3-29-201ENST00000604817 HTRA3P83110 453 aa4.75□□□□□ -1.65
IGHV3-29-201ENST00000604817 IDI1Q13907 227 aa4.75□□□□□ -1.65
IGHV3-29-201ENST00000604817 NKPD1Q17RQ9 610 aa4.75□□□□□ -1.65
IGHV3-29-201ENST00000604817 NBPF9Q3BBW0 867 aa4.75□□□□□ -1.65
IGHV3-29-201ENST00000604817 TUBB8Q3ZCM7 444 aa4.75□□□□□ -1.65
IGHV3-29-201ENST00000604817 ATP13A4Q4VNC1 1196 aa4.75□□□□□ -1.65
IGHV3-29-201ENST00000604817 PRR23BQ6ZRT6 265 aa4.75□□□□□ -1.65
IGHV3-29-201ENST00000604817 MAMDC2Q7Z304 686 aaPredicted RBP4.75□□□□□ -1.65
IGHV3-29-201ENST00000604817 TRIM59Q8IWR1 403 aa4.75□□□□□ -1.65
IGHV3-29-201ENST00000604817 PPHLN1Q8NEY8 458 aaKnown RBP4.75□□□□□ -1.65
IGHV3-29-201ENST00000604817 ENOX1Q8TC92 643 aaKnown RBP4.75□□□□□ -1.65
IGHV3-29-201ENST00000604817 SYTL5Q8TDW5 730 aaPredicted RBP4.75□□□□□ -1.65
IGHV3-29-201ENST00000604817 BTN2A2Q8WVV5 523 aa4.75□□□□□ -1.65
IGHV3-29-201ENST00000604817 LRRC59Q96AG4 307 aaKnown RBP4.75□□□□□ -1.65
IGHV3-29-201ENST00000604817 AHCYL2Q96HN2 611 aaKnown RBP4.75□□□□□ -1.65
IGHV3-29-201ENST00000604817 MPP4Q96JB8 637 aa4.75□□□□□ -1.65
IGHV3-29-201ENST00000604817 GPR101Q96P66 508 aaPredicted RBP4.75□□□□□ -1.65
IGHV3-29-201ENST00000604817 ASCC2Q9H1I8 757 aaPredicted RBP4.75□□□□□ -1.65
IGHV3-29-201ENST00000604817 SPTLC3Q9NUV7 552 aa4.75□□□□□ -1.65
IGHV3-29-201ENST00000604817 SAGE1Q9NXZ1 904 aa4.75□□□□□ -1.65
IGHV3-29-201ENST00000604817 SAMD15Q9P1V8 674 aa4.75□□□□□ -1.65
IGHV3-29-201ENST00000604817 ZNF451Q9Y4E5 1061 aa4.75□□□□□ -1.65
IGHV3-29-201ENST00000604817 TRAF6Q9Y4K3 522 aa4.75□□□□□ -1.65
IGHV3-29-201ENST00000604817 PCDHA9Q9Y5H5 950 aa4.75□□□□□ -1.65
IGHV3-29-201ENST00000604817 TET3O43151 1660 aa4.75□□□□□ -1.65
IGHV3-29-201ENST00000604817 MAP3K1Q13233 1512 aa4.75□□□□□ -1.65
IGHV3-29-201ENST00000604817 MTUS2Q5JR59 1369 aa4.75□□□□□ -1.65
IGHV3-29-201ENST00000604817 SHPRHQ149N8 1683 aa4.74□□□□□ -1.65
IGHV3-29-201ENST00000604817 F5H423 210 aaPredicted RBP4.74□□□□□ -1.65
IGHV3-29-201ENST00000604817 TRAF5O00463 557 aa4.74□□□□□ -1.65
IGHV3-29-201ENST00000604817 SHOXO15266 292 aa4.74□□□□□ -1.65
IGHV3-29-201ENST00000604817 ULK1O75385 1050 aa4.74□□□□□ -1.65
IGHV3-29-201ENST00000604817 RNASEH2AO75792 299 aaKnown RBP4.74□□□□□ -1.65
IGHV3-29-201ENST00000604817 EOMESO95936 686 aa4.74□□□□□ -1.65
IGHV3-29-201ENST00000604817 HSPA6P17066 643 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms