RNA–Protein interactions for RNA: ENST00000603907.1

GRAMD1A-214, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-214ENST00000603907 PPP6R2O75170 966 aa23.34■■□□□ 1.33
GRAMD1A-214ENST00000603907 GNAT1P11488 350 aa23.34■■□□□ 1.33
GRAMD1A-214ENST00000603907 LONP1P36776 959 aaKnown RBP23.34■■□□□ 1.33
GRAMD1A-214ENST00000603907 CEBPZQ03701 1054 aaKnown RBP23.34■■□□□ 1.33
GRAMD1A-214ENST00000603907 PLCB4Q15147 1175 aa23.34■■□□□ 1.33
GRAMD1A-214ENST00000603907 CCDC85BQ15834 202 aaPredicted RBP23.34■■□□□ 1.33
GRAMD1A-214ENST00000603907 IL17AQ16552 155 aa23.34■■□□□ 1.33
GRAMD1A-214ENST00000603907 BBXQ8WY36 941 aaPredicted RBP23.34■■□□□ 1.33
GRAMD1A-214ENST00000603907 POLR3CQ9BUI4 534 aaPredicted RBP23.34■■□□□ 1.33
GRAMD1A-214ENST00000603907 TSPYL2Q9H2G4 693 aaPredicted RBP23.34■■□□□ 1.33
GRAMD1A-214ENST00000603907 NKX2-4Q9H2Z4 354 aa23.34■■□□□ 1.33
GRAMD1A-214ENST00000603907 ZSWIM4Q9H7M6 989 aa23.34■■□□□ 1.33
GRAMD1A-214ENST00000603907 TUFT1Q9NNX1 390 aa23.34■■□□□ 1.33
GRAMD1A-214ENST00000603907 CHMP5Q9NZZ3 219 aa23.34■■□□□ 1.33
GRAMD1A-214ENST00000603907 GTF2IRD1Q9UHL9 959 aa23.34■■□□□ 1.33
GRAMD1A-214ENST00000603907 SRPRBQ9Y5M8 271 aaKnown RBP23.34■■□□□ 1.33
GRAMD1A-214ENST00000603907 POTEB3A0JP26 581 aa23.33■■□□□ 1.33
GRAMD1A-214ENST00000603907 VWA3AA6NCI4 1184 aa23.33■■□□□ 1.33
GRAMD1A-214ENST00000603907 SLC26A4O43511 780 aa23.33■■□□□ 1.33
GRAMD1A-214ENST00000603907 SMIM10L2AP0DMW4 78 aa23.33■■□□□ 1.33
GRAMD1A-214ENST00000603907 SMIM10L2BP0DMW5 78 aa23.33■■□□□ 1.33
GRAMD1A-214ENST00000603907 MARK3P27448 753 aa23.33■■□□□ 1.33
GRAMD1A-214ENST00000603907 HOXC8P31273 242 aa23.33■■□□□ 1.33
GRAMD1A-214ENST00000603907 KRT85P78386 507 aa23.33■■□□□ 1.33
GRAMD1A-214ENST00000603907 DNM1Q05193 864 aaKnown RBP23.33■■□□□ 1.33
GRAMD1A-214ENST00000603907 ADGRE1Q14246 886 aa23.33■■□□□ 1.33
GRAMD1A-214ENST00000603907 FAM47CQ5HY64 1035 aa23.33■■□□□ 1.33
GRAMD1A-214ENST00000603907 POTEBQ6S5H4 581 aa23.33■■□□□ 1.33
GRAMD1A-214ENST00000603907 C4orf19Q8IY42 314 aa23.33■■□□□ 1.33
GRAMD1A-214ENST00000603907 CKAP2LQ8IYA6 745 aa23.33■■□□□ 1.33
GRAMD1A-214ENST00000603907 KCNG4Q8TDN1 519 aa23.33■■□□□ 1.33
GRAMD1A-214ENST00000603907 UHRF1Q96T88 793 aaPredicted RBP23.33■■□□□ 1.33
GRAMD1A-214ENST00000603907 RNPEPQ9H4A4 650 aa23.33■■□□□ 1.33
GRAMD1A-214ENST00000603907 NRBP2Q9NSY0 501 aa23.33■■□□□ 1.33
GRAMD1A-214ENST00000603907 HDAC6Q9UBN7 1215 aa23.33■■□□□ 1.33
GRAMD1A-214ENST00000603907 TRPC6Q9Y210 931 aa23.33■■□□□ 1.33
GRAMD1A-214ENST00000603907 MYH9P35579 1960 aaKnown RBP23.32■■□□□ 1.32
GRAMD1A-214ENST00000603907 COL1A2P08123 1366 aa23.32■■□□□ 1.32
GRAMD1A-214ENST00000603907 RRN3P2A6NIE6 340 aa23.32■■□□□ 1.32
GRAMD1A-214ENST00000603907 SPTLC2O15270 562 aa23.32■■□□□ 1.32
GRAMD1A-214ENST00000603907 ZNF862O60290 1169 aa23.32■■□□□ 1.32
GRAMD1A-214ENST00000603907 SLITRK3O94933 977 aa23.32■■□□□ 1.32
GRAMD1A-214ENST00000603907 LYPLA2O95372 231 aa23.32■■□□□ 1.32
GRAMD1A-214ENST00000603907 OATP04181 439 aa23.32■■□□□ 1.32
GRAMD1A-214ENST00000603907 ATP4AP20648 1035 aa23.32■■□□□ 1.32
GRAMD1A-214ENST00000603907 RPA1P27694 616 aa23.32■■□□□ 1.32
GRAMD1A-214ENST00000603907 CHMP4BP1P59074 171 aa23.32■■□□□ 1.32
GRAMD1A-214ENST00000603907 XKR3Q5GH77 459 aa23.32■■□□□ 1.32
GRAMD1A-214ENST00000603907 BANK1Q8NDB2 785 aa23.32■■□□□ 1.32
GRAMD1A-214ENST00000603907 DYDC2Q96IM9 177 aa23.32■■□□□ 1.32
GRAMD1A-214ENST00000603907 LXNQ9BS40 222 aa23.32■■□□□ 1.32
GRAMD1A-214ENST00000603907 CXXC1Q9P0U4 656 aaPredicted RBP23.32■■□□□ 1.32
GRAMD1A-214ENST00000603907 TFIP11Q9UBB9 837 aaKnown RBP23.32■■□□□ 1.32
GRAMD1A-214ENST00000603907 C17orf102A2RUQ5 167 aa23.31■■□□□ 1.32
GRAMD1A-214ENST00000603907 PRKCEQ02156 737 aa23.31■■□□□ 1.32
GRAMD1A-214ENST00000603907 PPFIA1Q13136 1202 aa23.31■■□□□ 1.32
GRAMD1A-214ENST00000603907 UGCGQ16739 394 aa23.31■■□□□ 1.32
GRAMD1A-214ENST00000603907 FOXD4L6Q3SYB3 417 aaPredicted RBP23.31■■□□□ 1.32
GRAMD1A-214ENST00000603907 ZNF484Q5JVG2 852 aa23.31■■□□□ 1.32
GRAMD1A-214ENST00000603907 KRT79Q5XKE5 535 aa23.31■■□□□ 1.32
GRAMD1A-214ENST00000603907 FOXD4L3Q6VB84 417 aaPredicted RBP23.31■■□□□ 1.32
GRAMD1A-214ENST00000603907 OTOP2Q7RTS6 562 aa23.31■■□□□ 1.32
GRAMD1A-214ENST00000603907 KCTD17Q8N5Z5 321 aa23.31■■□□□ 1.32
GRAMD1A-214ENST00000603907 KRI1Q8N9T8 703 aaKnown RBP23.31■■□□□ 1.32
GRAMD1A-214ENST00000603907 RGL1Q9NZL6 768 aa23.31■■□□□ 1.32
GRAMD1A-214ENST00000603907 FBXO2Q9UK22 296 aaPredicted RBP23.31■■□□□ 1.32
GRAMD1A-214ENST00000603907 WDR81Q562E7 1941 aa23.3■■□□□ 1.32
GRAMD1A-214ENST00000603907 INSRRP14616 1297 aa23.3■■□□□ 1.32
GRAMD1A-214ENST00000603907 MARCKSP29966 332 aaPredicted RBP23.3■■□□□ 1.32
GRAMD1A-214ENST00000603907 TPH2Q8IWU9 490 aa23.3■■□□□ 1.32
GRAMD1A-214ENST00000603907 RPUSD2Q8IZ73 545 aaKnown RBP23.3■■□□□ 1.32
GRAMD1A-214ENST00000603907 SCAND2PQ9GZW5 306 aaPredicted RBP23.3■■□□□ 1.32
GRAMD1A-214ENST00000603907 RCOR1Q9UKL0 485 aa23.3■■□□□ 1.32
GRAMD1A-214ENST00000603907 YBX2Q9Y2T7 364 aaKnown RBP23.3■■□□□ 1.32
GRAMD1A-214ENST00000603907 PPME1Q9Y570 386 aa23.3■■□□□ 1.32
GRAMD1A-214ENST00000603907 CHD9Q3L8U1 2897 aa23.3■■□□□ 1.32
GRAMD1A-214ENST00000603907 XRCC6P12956 609 aaKnown RBP eCLIP23.29■■□□□ 1.32
GRAMD1A-214ENST00000603907 CCL23P55773 120 aa23.29■■□□□ 1.32
GRAMD1A-214ENST00000603907 CYP4A11Q02928 519 aa23.29■■□□□ 1.32
GRAMD1A-214ENST00000603907 CTTNQ14247 550 aaKnown RBP23.29■■□□□ 1.32
GRAMD1A-214ENST00000603907 GRIK4Q16099 956 aa23.29■■□□□ 1.32
GRAMD1A-214ENST00000603907 GDF6Q6KF10 455 aaPredicted RBP23.29■■□□□ 1.32
GRAMD1A-214ENST00000603907 OTUD6AQ7L8S5 288 aa23.29■■□□□ 1.32
GRAMD1A-214ENST00000603907 CATSPER3Q86XQ3 398 aa23.29■■□□□ 1.32
GRAMD1A-214ENST00000603907 SNX29Q8TEQ0 813 aa23.29■■□□□ 1.32
GRAMD1A-214ENST00000603907 NIFKQ9BYG3 293 aaKnown RBP23.29■■□□□ 1.32
GRAMD1A-214ENST00000603907 SLC4A7Q9Y6M7 1214 aa23.29■■□□□ 1.32
GRAMD1A-214ENST00000603907 UMODL1Q5DID0 1318 aa23.29■■□□□ 1.32
GRAMD1A-214ENST00000603907 KDM3AQ9Y4C1 1321 aa23.29■■□□□ 1.32
GRAMD1A-214ENST00000603907 STBD1O95210 358 aa23.28■■□□□ 1.32
GRAMD1A-214ENST00000603907 SPATA31C1P0DKV0 1188 aa23.28■■□□□ 1.32
GRAMD1A-214ENST00000603907 CCT6AP40227 531 aaKnown RBP23.28■■□□□ 1.32
GRAMD1A-214ENST00000603907 ADAM17P78536 824 aa23.28■■□□□ 1.32
GRAMD1A-214ENST00000603907 PTGISQ16647 500 aa23.28■■□□□ 1.32
GRAMD1A-214ENST00000603907 PPP2R2DQ66LE6 453 aa23.28■■□□□ 1.32
GRAMD1A-214ENST00000603907 LMBR1Q8WVP7 490 aa23.28■■□□□ 1.32
GRAMD1A-214ENST00000603907 NOC4LQ9BVI4 516 aaKnown RBP23.28■■□□□ 1.32
GRAMD1A-214ENST00000603907 SETD4Q9NVD3 440 aa23.28■■□□□ 1.32
GRAMD1A-214ENST00000603907 NOD1Q9Y239 953 aa23.28■■□□□ 1.32
GRAMD1A-214ENST00000603907 NCOR1O75376 2440 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms