RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 LOXHD1Q8IVV2 1947 aa17.42■□□□□ 0.38
CDCA3-211ENST00000603043 H0YGN5 161 aa17.41■□□□□ 0.38
CDCA3-211ENST00000603043 TIMP1P01033 207 aa17.41■□□□□ 0.38
CDCA3-211ENST00000603043 KLRC1P26715 233 aa17.41■□□□□ 0.38
CDCA3-211ENST00000603043 GRIN1Q05586 938 aa17.41■□□□□ 0.38
CDCA3-211ENST00000603043 BFSP2Q13515 415 aa17.41■□□□□ 0.38
CDCA3-211ENST00000603043 MTERF2Q49AM1 385 aa17.41■□□□□ 0.38
CDCA3-211ENST00000603043 PLA2G4FQ68DD2 849 aa17.41■□□□□ 0.38
CDCA3-211ENST00000603043 MTHFD1LQ6UB35 978 aa17.41■□□□□ 0.38
CDCA3-211ENST00000603043 CAGE1Q8TC20 777 aa17.41■□□□□ 0.38
CDCA3-211ENST00000603043 WNT8BQ93098 351 aa17.41■□□□□ 0.38
CDCA3-211ENST00000603043 SH2D3AQ9BRG2 576 aa17.41■□□□□ 0.38
CDCA3-211ENST00000603043 FBXO2Q9UK22 296 aaPredicted RBP17.41■□□□□ 0.38
CDCA3-211ENST00000603043 SRPRBQ9Y5M8 271 aaKnown RBP17.41■□□□□ 0.38
CDCA3-211ENST00000603043 UMODL1Q5DID0 1318 aa17.41■□□□□ 0.38
CDCA3-211ENST00000603043 PITPNM1O00562 1244 aa17.4■□□□□ 0.38
CDCA3-211ENST00000603043 SPTLC2O15270 562 aa17.4■□□□□ 0.38
CDCA3-211ENST00000603043 C22orf31O95567 290 aa17.4■□□□□ 0.38
CDCA3-211ENST00000603043 ITGB8P26012 769 aa17.4■□□□□ 0.38
CDCA3-211ENST00000603043 LONP1P36776 959 aaKnown RBP17.4■□□□□ 0.38
CDCA3-211ENST00000603043 TARBP2Q15633 366 aaKnown RBP17.4■□□□□ 0.38
CDCA3-211ENST00000603043 POTEGQ6S5H5 508 aa17.4■□□□□ 0.38
CDCA3-211ENST00000603043 RUFY4Q6ZNE9 571 aa17.4■□□□□ 0.38
CDCA3-211ENST00000603043 OTUD6AQ7L8S5 288 aa17.4■□□□□ 0.38
CDCA3-211ENST00000603043 CYP26B1Q9NR63 512 aa17.4■□□□□ 0.38
CDCA3-211ENST00000603043 CIZ1Q9ULV3 898 aaPredicted RBP17.4■□□□□ 0.38
CDCA3-211ENST00000603043 PCDHA2Q9Y5H9 948 aa17.4■□□□□ 0.38
CDCA3-211ENST00000603043 ZBTB39O15060 712 aa17.4■□□□□ 0.38
CDCA3-211ENST00000603043 NCLP19338 710 aaKnown RBP17.4■□□□□ 0.38
CDCA3-211ENST00000603043 MUTP22033 750 aa17.4■□□□□ 0.38
CDCA3-211ENST00000603043 CYP2C18P33260 490 aa17.4■□□□□ 0.38
CDCA3-211ENST00000603043 TBC1D8BQ0IIM8 1120 aa17.4■□□□□ 0.38
CDCA3-211ENST00000603043 KRI1Q8N9T8 703 aaKnown RBP17.4■□□□□ 0.38
CDCA3-211ENST00000603043 CEP170P1Q96L14 293 aa17.4■□□□□ 0.38
CDCA3-211ENST00000603043 MMTAG2Q9BU76 263 aaKnown RBP17.4■□□□□ 0.38
CDCA3-211ENST00000603043 MAGEB2O15479 319 aa17.39■□□□□ 0.37
CDCA3-211ENST00000603043 THPOP40225 353 aa17.39■□□□□ 0.37
CDCA3-211ENST00000603043 NPEPPSP55786 919 aa17.39■□□□□ 0.37
CDCA3-211ENST00000603043 KRT85P78386 507 aa17.39■□□□□ 0.37
CDCA3-211ENST00000603043 RBL2Q08999 1139 aa17.39■□□□□ 0.37
CDCA3-211ENST00000603043 GSE1Q14687 1217 aa17.39■□□□□ 0.37
CDCA3-211ENST00000603043 ECM1Q16610 540 aa17.39■□□□□ 0.37
CDCA3-211ENST00000603043 TRIM71Q2Q1W2 868 aaKnown RBP17.39■□□□□ 0.37
CDCA3-211ENST00000603043 RETREG2Q8NC44 543 aa17.39■□□□□ 0.37
CDCA3-211ENST00000603043 CLIC6Q96NY7 704 aa17.39■□□□□ 0.37
CDCA3-211ENST00000603043 CSRNP2Q9H175 543 aa17.39■□□□□ 0.37
CDCA3-211ENST00000603043 SCN5AQ14524 2016 aa17.39■□□□□ 0.37
CDCA3-211ENST00000603043 KDM3AQ9Y4C1 1321 aa17.39■□□□□ 0.37
CDCA3-211ENST00000603043 PPP6R2O75170 966 aa17.39■□□□□ 0.37
CDCA3-211ENST00000603043 CKBP12277 381 aa17.39■□□□□ 0.37
CDCA3-211ENST00000603043 UBA7P41226 1012 aa17.39■□□□□ 0.37
CDCA3-211ENST00000603043 ZRSR1Q15695 479 aaKnown RBP17.39■□□□□ 0.37
CDCA3-211ENST00000603043 XKR9Q5GH70 373 aa17.39■□□□□ 0.37
CDCA3-211ENST00000603043 RSPH3Q86UC2 560 aa17.39■□□□□ 0.37
CDCA3-211ENST00000603043 KCNG4Q8TDN1 519 aa17.39■□□□□ 0.37
CDCA3-211ENST00000603043 PIGOQ8TEQ8 1089 aa17.39■□□□□ 0.37
CDCA3-211ENST00000603043 DNAJB3Q8WWF6 145 aa17.39■□□□□ 0.37
CDCA3-211ENST00000603043 BADQ92934 168 aa17.39■□□□□ 0.37
CDCA3-211ENST00000603043 CHAMP1Q96JM3 812 aa17.39■□□□□ 0.37
CDCA3-211ENST00000603043 CCDC43Q96MW1 224 aaKnown RBP17.39■□□□□ 0.37
CDCA3-211ENST00000603043 NACC1Q96RE7 527 aa17.39■□□□□ 0.37
CDCA3-211ENST00000603043 CEP89Q96ST8 783 aa17.39■□□□□ 0.37
CDCA3-211ENST00000603043 LBHD1Q9BQE6 289 aaPredicted RBP17.39■□□□□ 0.37
CDCA3-211ENST00000603043 FAM49AQ9H0Q0 323 aaPredicted RBP17.39■□□□□ 0.37
CDCA3-211ENST00000603043 WNT8AQ9H1J5 351 aa17.39■□□□□ 0.37
CDCA3-211ENST00000603043 ANKEF1Q9NU02 776 aa17.39■□□□□ 0.37
CDCA3-211ENST00000603043 DDX19AQ9NUU7 478 aaKnown RBP17.39■□□□□ 0.37
CDCA3-211ENST00000603043 KIAA1024Q9UPX6 916 aa17.39■□□□□ 0.37
CDCA3-211ENST00000603043 A0A087WWV3 80 aa17.38■□□□□ 0.37
CDCA3-211ENST00000603043 CAND2O75155 1236 aa17.38■□□□□ 0.37
CDCA3-211ENST00000603043 XRCC6P12956 609 aaKnown RBP eCLIP17.38■□□□□ 0.37
CDCA3-211ENST00000603043 CCL23P55773 120 aa17.38■□□□□ 0.37
CDCA3-211ENST00000603043 METTL13Q8N6R0 699 aa17.38■□□□□ 0.37
CDCA3-211ENST00000603043 ZNF579Q8NAF0 562 aaKnown RBP17.38■□□□□ 0.37
CDCA3-211ENST00000603043 PPME1Q9Y570 386 aa17.38■□□□□ 0.37
CDCA3-211ENST00000603043 SIP14410 1827 aa17.37■□□□□ 0.37
CDCA3-211ENST00000603043 SMIM35A0A1B0GVV1 85 aa17.37■□□□□ 0.37
CDCA3-211ENST00000603043 RPLP2P05387 115 aaKnown RBP17.37■□□□□ 0.37
CDCA3-211ENST00000603043 RARRES1P49788 294 aa17.37■□□□□ 0.37
CDCA3-211ENST00000603043 MDM2Q00987 491 aaPredicted RBP17.37■□□□□ 0.37
CDCA3-211ENST00000603043 SPECC1Q5M775 1068 aa17.37■□□□□ 0.37
CDCA3-211ENST00000603043 ZNF618Q5T7W0 954 aa17.37■□□□□ 0.37
CDCA3-211ENST00000603043 MFSD5Q6N075 450 aa17.37■□□□□ 0.37
CDCA3-211ENST00000603043 EFCAB12Q6NXP0 572 aa17.37■□□□□ 0.37
CDCA3-211ENST00000603043 RPAINQ86UA6 219 aa17.37■□□□□ 0.37
CDCA3-211ENST00000603043 CABP7Q86V35 215 aa17.37■□□□□ 0.37
CDCA3-211ENST00000603043 SLC7A3Q8WY07 619 aa17.37■□□□□ 0.37
CDCA3-211ENST00000603043 SUGCTQ9HAC7 445 aa17.37■□□□□ 0.37
CDCA3-211ENST00000603043 SELPP16109 830 aa17.37■□□□□ 0.37
CDCA3-211ENST00000603043 TMOD1P28289 359 aa17.37■□□□□ 0.37
CDCA3-211ENST00000603043 POLGP54098 1239 aaPredicted RBP17.37■□□□□ 0.37
CDCA3-211ENST00000603043 LRRC8DQ7L1W4 858 aa17.37■□□□□ 0.37
CDCA3-211ENST00000603043 LRRC71Q8N4P6 559 aa17.37■□□□□ 0.37
CDCA3-211ENST00000603043 TMEM199Q8N511 208 aa17.37■□□□□ 0.37
CDCA3-211ENST00000603043 SCLYQ96I15 445 aa17.37■□□□□ 0.37
CDCA3-211ENST00000603043 EPSTI1Q96J88 318 aa17.37■□□□□ 0.37
CDCA3-211ENST00000603043 CDK5RAP3Q96JB5 506 aa17.37■□□□□ 0.37
CDCA3-211ENST00000603043 NT5C3AQ9H0P0 336 aa17.37■□□□□ 0.37
CDCA3-211ENST00000603043 DBR1Q9UK59 544 aaKnown RBP17.37■□□□□ 0.37
CDCA3-211ENST00000603043 MAFO75444 373 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms