RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 ATP10DQ9P241 1426 aa9.32□□□□□ -0.92
CSMD1-216ENST00000602557 CLASP1Q7Z460 1538 aa9.32□□□□□ -0.92
CSMD1-216ENST00000602557 CFAP69A5D8W1 941 aa9.32□□□□□ -0.92
CSMD1-216ENST00000602557 TRIM25Q14258 630 aaKnown RBP9.32□□□□□ -0.92
CSMD1-216ENST00000602557 SPARCL1Q14515 664 aa9.32□□□□□ -0.92
CSMD1-216ENST00000602557 TTLL7Q6ZT98 887 aa9.32□□□□□ -0.92
CSMD1-216ENST00000602557 SRRM1Q8IYB3 904 aaKnown RBP9.32□□□□□ -0.92
CSMD1-216ENST00000602557 LARP4BQ92615 738 aaKnown RBP9.32□□□□□ -0.92
CSMD1-216ENST00000602557 TNFAIP1Q13829 316 aa9.32□□□□□ -0.92
CSMD1-216ENST00000602557 ZNF589Q86UQ0 364 aaPredicted RBP9.32□□□□□ -0.92
CSMD1-216ENST00000602557 GSDMAQ96QA5 445 aa9.32□□□□□ -0.92
CSMD1-216ENST00000602557 GOLGA8SH3BPF8 625 aa9.32□□□□□ -0.92
CSMD1-216ENST00000602557 PCDHA5Q9Y5H7 936 aa9.32□□□□□ -0.92
CSMD1-216ENST00000602557 VCAM1P19320 739 aa9.32□□□□□ -0.92
CSMD1-216ENST00000602557 PRPSAP1Q14558 356 aa9.32□□□□□ -0.92
CSMD1-216ENST00000602557 TEKT3Q9BXF9 490 aa9.32□□□□□ -0.92
CSMD1-216ENST00000602557 MRGBPQ9NV56 204 aa9.32□□□□□ -0.92
CSMD1-216ENST00000602557 CSADQ9Y600 493 aa9.32□□□□□ -0.92
CSMD1-216ENST00000602557 APOA1P02647 267 aa9.32□□□□□ -0.92
CSMD1-216ENST00000602557 KRT26Q7Z3Y9 468 aa9.32□□□□□ -0.92
CSMD1-216ENST00000602557 INPP5FQ9Y2H2 1132 aa9.32□□□□□ -0.92
CSMD1-216ENST00000602557 NFRKBQ6P4R8 1299 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 NOP9Q86U38 636 aaKnown RBP9.31□□□□□ -0.92
CSMD1-216ENST00000602557 MCF2L2Q86YR7 1114 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 TTC17Q96AE7 1141 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 SRGAP2BP0DMP2 458 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 GRK2P25098 689 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 PHKA1P46020 1223 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 RPS6P62753 249 aaKnown RBP9.31□□□□□ -0.92
CSMD1-216ENST00000602557 UBXN2AP68543 259 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 TCIRG1Q13488 830 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 C10orf76Q5T2E6 689 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 SAMSN1Q9NSI8 373 aaKnown RBP9.31□□□□□ -0.92
CSMD1-216ENST00000602557 NDUFA10O95299 355 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 EIF2B2P49770 351 aaKnown RBP9.31□□□□□ -0.92
CSMD1-216ENST00000602557 MFAP3P55082 362 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 HIC2Q96JB3 615 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 NOD2Q9HC29 1040 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 POLR3EQ9NVU0 708 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 FNDC3AQ9Y2H6 1198 aaKnown RBP9.31□□□□□ -0.92
CSMD1-216ENST00000602557 MFAP3LO75121 409 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 CACNB1Q02641 598 aaPredicted RBP9.31□□□□□ -0.92
CSMD1-216ENST00000602557 ABCB5Q2M3G0 1257 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 TRIM16LQ309B1 348 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 ATP6V0A1Q93050 837 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 PRMT1Q99873 361 aaKnown RBP9.31□□□□□ -0.92
CSMD1-216ENST00000602557 HPCAL4Q9UM19 191 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 MDM2Q00987 491 aaPredicted RBP9.31□□□□□ -0.92
CSMD1-216ENST00000602557 EPM2AIP1Q7L775 607 aaPredicted RBP9.31□□□□□ -0.92
CSMD1-216ENST00000602557 NT5C1BQ96P26 610 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 BRD8Q9H0E9 1235 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 KRT1P04264 644 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 GNL1P36915 607 aaPredicted RBP9.31□□□□□ -0.92
CSMD1-216ENST00000602557 STX1BP61266 288 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 ATG16L1Q676U5 607 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 RSRC2Q7L4I2 434 aaKnown RBP9.31□□□□□ -0.92
CSMD1-216ENST00000602557 RAB44Q7Z6P3 723 aaPredicted RBP9.31□□□□□ -0.92
CSMD1-216ENST00000602557 KCTD6Q8NC69 237 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 SUPT20HQ8NEM7 779 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 DHTKD1Q96HY7 919 aaPredicted RBP9.31□□□□□ -0.92
CSMD1-216ENST00000602557 ATP11BQ9Y2G3 1177 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 DLGAP3O95886 979 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 CAPN1P07384 714 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 TMPRSS15P98073 1019 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 Q3C1V9 767 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 SLC26A7Q8TE54 656 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 ZBED2Q9BTP6 218 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 UPF3AQ9H1J1 476 aaKnown RBP9.31□□□□□ -0.92
CSMD1-216ENST00000602557 HDAC4P56524 1084 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 YEATS2Q9ULM3 1422 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 LRRC41Q15345 812 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 SLFN13Q68D06 897 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 KCTD1Q719H9 257 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 PACS2Q86VP3 889 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 CRLF3Q8IUI8 442 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 PI4K2BQ8TCG2 481 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 ARL8AQ96BM9 186 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 SOS2Q07890 1332 aaPredicted RBP9.31□□□□□ -0.92
CSMD1-216ENST00000602557 COPB2P35606 906 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 PGM1P36871 562 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 PTK2Q05397 1052 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 SPOPLQ6IQ16 392 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 FAM186BQ8IYM0 893 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 CSRNP1Q96S65 589 aa9.31□□□□□ -0.92
CSMD1-216ENST00000602557 NBPF26B4DH59 902 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 BPIFB4P59827 614 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 NBPF15Q8N660 670 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 CUEDC2Q9H467 287 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 SMAPO00193 183 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 BBS9Q3SYG4 887 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 ZBTB38Q8NAP3 1195 aaPredicted RBP9.3□□□□□ -0.92
CSMD1-216ENST00000602557 GFM2Q969S9 779 aaKnown RBP9.3□□□□□ -0.92
CSMD1-216ENST00000602557 PAWRQ96IZ0 340 aaKnown RBP9.3□□□□□ -0.92
CSMD1-216ENST00000602557 SLC38A10Q9HBR0 1119 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 SLC5A4Q9NY91 659 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 TFAMQ00059 246 aaKnown RBP9.3□□□□□ -0.92
CSMD1-216ENST00000602557 CYGBQ8WWM9 190 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 ZFATQ9P243 1243 aa9.3□□□□□ -0.92
CSMD1-216ENST00000602557 ZBTB24O43167 697 aaPredicted RBP9.3□□□□□ -0.92
CSMD1-216ENST00000602557 EIF3BP55884 814 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms