RNA–Protein interactions for RNA: ENST00000600729.1

MIA-RAB4B-201, Transcript of MIA-RAB4B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene MIA-RAB4B, Length 1,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIA-RAB4B-201ENST00000600729 RRP36Q96EU6 259 aaKnown RBP11.59□□□□□ -0.55
MIA-RAB4B-201ENST00000600729 SAMD11Q96NU1 681 aa11.59□□□□□ -0.55
MIA-RAB4B-201ENST00000600729 SEMA4AQ9H3S1 761 aa11.59□□□□□ -0.55
MIA-RAB4B-201ENST00000600729 NSUN3Q9H649 340 aaKnown RBP11.59□□□□□ -0.55
MIA-RAB4B-201ENST00000600729 ZNF215Q9UL58 517 aaPredicted RBP11.59□□□□□ -0.55
MIA-RAB4B-201ENST00000600729 MYH9P35579 1960 aaKnown RBP11.59□□□□□ -0.55
MIA-RAB4B-201ENST00000600729 CNTNAP5Q8WYK1 1306 aa11.59□□□□□ -0.55
MIA-RAB4B-201ENST00000600729 SLC27A2O14975 620 aa11.58□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 SDHBP21912 280 aa11.58□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 CD52P31358 61 aa11.58□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 IGBP1P78318 339 aa11.58□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 TMEM62Q0P6H9 643 aa11.58□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 TMTC3Q6ZXV5 915 aa11.58□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 ADGRD2Q7Z7M1 963 aa11.58□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 CCDC82Q8N4S0 544 aa11.58□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 DCLK2Q8N568 766 aa11.58□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 APBB2Q92870 758 aa11.58□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 CLP1Q92989 425 aaKnown RBP11.58□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 TUBE1Q9UJT0 475 aa11.58□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 MRPL42Q9Y6G3 142 aaKnown RBP11.58□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 DCDC2BA2VCK2 349 aa11.57□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 DGKIO75912 1065 aa11.57□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 GNAT1P11488 350 aa11.57□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 INSRRP14616 1297 aa11.57□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 SMARCA1P28370 1054 aa11.57□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 BMPR1AP36894 532 aa11.57□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 FUT2Q10981 343 aa11.57□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 TRAF1Q13077 416 aa11.57□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 ITGB3BPQ13352 177 aaPredicted RBP11.57□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 SART3Q15020 963 aaKnown RBP11.57□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 NECTIN1Q15223 517 aa11.57□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 PTPROQ16827 1216 aa11.57□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 WWC2Q6AWC2 1192 aa11.57□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 XRRA1Q6P2D8 792 aa11.57□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 TSHZ1Q6ZSZ6 1077 aa11.57□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 NLRX1Q86UT6 975 aa11.57□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 FIBCD1Q8N539 461 aa11.57□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 CTCFLQ8NI51 663 aaPredicted RBP11.57□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 RUFY2Q8WXA3 655 aa11.57□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 SEPT1Q8WYJ6 367 aa11.57□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 RUBCNQ92622 972 aa11.57□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 IL17RAQ96F46 866 aa11.57□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 TCEANC2Q96MN5 208 aa11.57□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 TMX1Q9H3N1 280 aa11.57□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 PSTPIP2Q9H939 334 aa11.57□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 JADE2Q9NQC1 790 aa11.57□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 HCSTQ9UBK5 93 aa11.57□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 PCDHA6Q9UN73 950 aa11.57□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 PCDHA8Q9Y5H6 950 aa11.57□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 MGEA5O60502 916 aa11.56□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 MMP1P03956 469 aa11.56□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 ITGB1P05556 798 aa11.56□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 ARP10275 920 aa11.56□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 MRPS6P82932 125 aaKnown RBP11.56□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 PTPN13Q12923 2485 aa11.56□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 MTMR1Q13613 665 aa11.56□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 PLCB4Q15147 1175 aa11.56□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 PTPN21Q16825 1174 aa11.56□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 CREB3L3Q68CJ9 461 aa11.56□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 TAF2Q6P1X5 1199 aa11.56□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 CUL5Q93034 780 aa11.56□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 ESYT1Q9BSJ8 1104 aa11.56□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 FAM49AQ9H0Q0 323 aaPredicted RBP11.56□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 TMEM260Q9NX78 707 aa11.56□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 ERAP1Q9NZ08 941 aa11.56□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 GLP2RO95838 553 aa11.55□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 CCNE2O96020 404 aa11.55□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 KIF5BP33176 963 aa11.55□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 LIFRP42702 1097 aa11.55□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 RBM10P98175 930 aaKnown RBP11.55□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 TMEM266Q2M3C6 531 aa11.55□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 PAN2Q504Q3 1202 aaKnown RBP11.55□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 ASTLQ6HA08 431 aaPredicted RBP11.55□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 SGMS1Q86VZ5 419 aa11.55□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 MICU3Q86XE3 530 aa11.55□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 TMEM40Q8WWA1 233 aa11.55□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 TMEM87BQ96K49 555 aa11.55□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 MSLNLQ96KJ4 702 aa11.55□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 MXRA8Q9BRK3 442 aa11.55□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 CDHR5Q9HBB8 845 aa11.55□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 KCNH7Q9NS40 1196 aa11.55□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 SEC63Q9UGP8 760 aaKnown RBP11.55□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 BRPF3Q9ULD4 1205 aa11.55□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 PLAGL2Q9UPG8 496 aa11.55□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 ZBTB42B2RXF5 422 aa11.54□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 NCK2O43639 380 aa11.54□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 RB1P06400 928 aa11.54□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 MCM5P33992 734 aa11.54□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 ACTR2P61160 394 aa11.54□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 BTG3Q14201 252 aaPredicted RBP11.54□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 ANGPT1Q15389 498 aa11.54□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 CASC1Q6TDU7 716 aa11.54□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 LRSAM1Q6UWE0 723 aa11.54□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 NFXL1Q6ZNB6 911 aa11.54□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 HEATR3Q7Z4Q2 680 aa11.54□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 FANCBQ8NB91 859 aa11.54□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 GIMAP8Q8ND71 665 aaPredicted RBP11.54□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 SPPL3Q8TCT6 385 aa11.54□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 GLG1Q92896 1179 aa11.54□□□□□ -0.56
MIA-RAB4B-201ENST00000600729 LZTS2Q9BRK4 669 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms