RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 GTPBP4Q9BZE4 634 aaKnown RBP13.7□□□□□ -0.22
TGFB1-204ENST00000600196 TNMDQ9H2S6 317 aa13.7□□□□□ -0.22
TGFB1-204ENST00000600196 RNPEPQ9H4A4 650 aa13.7□□□□□ -0.22
TGFB1-204ENST00000600196 GDPD2Q9HCC8 539 aa13.7□□□□□ -0.22
TGFB1-204ENST00000600196 LMBRD1Q9NUN5 540 aa13.7□□□□□ -0.22
TGFB1-204ENST00000600196 KBTBD4Q9NVX7 518 aa13.7□□□□□ -0.22
TGFB1-204ENST00000600196 GTF2IRD1Q9UHL9 959 aa13.7□□□□□ -0.22
TGFB1-204ENST00000600196 MYH9P35579 1960 aaKnown RBP13.7□□□□□ -0.22
TGFB1-204ENST00000600196 PP2D1A8MPX8 630 aa13.69□□□□□ -0.22
TGFB1-204ENST00000600196 MAFO75444 373 aaPredicted RBP13.69□□□□□ -0.22
TGFB1-204ENST00000600196 SMIM10L2AP0DMW4 78 aa13.69□□□□□ -0.22
TGFB1-204ENST00000600196 SMIM10L2BP0DMW5 78 aa13.69□□□□□ -0.22
TGFB1-204ENST00000600196 INSRRP14616 1297 aa13.69□□□□□ -0.22
TGFB1-204ENST00000600196 CYP11B2P19099 503 aa13.69□□□□□ -0.22
TGFB1-204ENST00000600196 GUCY2CP25092 1073 aa13.69□□□□□ -0.22
TGFB1-204ENST00000600196 TMOD1P28289 359 aa13.69□□□□□ -0.22
TGFB1-204ENST00000600196 CDC25AP30304 524 aa13.69□□□□□ -0.22
TGFB1-204ENST00000600196 ABCD1P33897 745 aa13.69□□□□□ -0.22
TGFB1-204ENST00000600196 STAT6P42226 847 aa13.69□□□□□ -0.22
TGFB1-204ENST00000600196 DNM2P50570 870 aa13.69□□□□□ -0.22
TGFB1-204ENST00000600196 RTP1P59025 263 aa13.69□□□□□ -0.22
TGFB1-204ENST00000600196 PPFIA1Q13136 1202 aa13.69□□□□□ -0.22
TGFB1-204ENST00000600196 KARSQ15046 597 aaKnown RBP13.69□□□□□ -0.22
TGFB1-204ENST00000600196 UGCGQ16739 394 aa13.69□□□□□ -0.22
TGFB1-204ENST00000600196 SKOR2Q2VWA4 1001 aaPredicted RBP13.69□□□□□ -0.22
TGFB1-204ENST00000600196 NBPF20Q3BBV1 942 aa13.69□□□□□ -0.22
TGFB1-204ENST00000600196 COL13A1Q5TAT6 717 aaPredicted RBP13.69□□□□□ -0.22
TGFB1-204ENST00000600196 USP49Q70CQ1 688 aa13.69□□□□□ -0.22
TGFB1-204ENST00000600196 ANKRD33Q7Z3H0 272 aa13.69□□□□□ -0.22
TGFB1-204ENST00000600196 CEP57L1Q8IYX8 460 aa13.69□□□□□ -0.22
TGFB1-204ENST00000600196 FMR1NBQ8N0W7 255 aaPredicted RBP13.69□□□□□ -0.22
TGFB1-204ENST00000600196 FSIP1Q8NA03 581 aa13.69□□□□□ -0.22
TGFB1-204ENST00000600196 TCP11Q8WWU5 503 aa13.69□□□□□ -0.22
TGFB1-204ENST00000600196 SLC7A3Q8WY07 619 aa13.69□□□□□ -0.22
TGFB1-204ENST00000600196 LARP4BQ92615 738 aaKnown RBP13.69□□□□□ -0.22
TGFB1-204ENST00000600196 KCNN1Q92952 543 aa13.69□□□□□ -0.22
TGFB1-204ENST00000600196 CEP170P1Q96L14 293 aa13.69□□□□□ -0.22
TGFB1-204ENST00000600196 CCDC43Q96MW1 224 aaKnown RBP13.69□□□□□ -0.22
TGFB1-204ENST00000600196 UIMC1Q96RL1 719 aa13.69□□□□□ -0.22
TGFB1-204ENST00000600196 C11orf49Q9H6J7 331 aa13.69□□□□□ -0.22
TGFB1-204ENST00000600196 DHX33Q9H6R0 707 aaKnown RBP13.69□□□□□ -0.22
TGFB1-204ENST00000600196 PDLIM7Q9NR12 457 aa13.69□□□□□ -0.22
TGFB1-204ENST00000600196 BLOC1S4Q9NUP1 217 aa13.69□□□□□ -0.22
TGFB1-204ENST00000600196 TRPC6Q9Y210 931 aa13.69□□□□□ -0.22
TGFB1-204ENST00000600196 TELO2Q9Y4R8 837 aa13.69□□□□□ -0.22
TGFB1-204ENST00000600196 PCDHA2Q9Y5H9 948 aa13.69□□□□□ -0.22
TGFB1-204ENST00000600196 KIAA0100Q14667 2235 aaKnown RBP13.69□□□□□ -0.22
TGFB1-204ENST00000600196 LOXHD1Q8IVV2 1947 aa13.68□□□□□ -0.22
TGFB1-204ENST00000600196 SMIM35A0A1B0GVV1 85 aa13.68□□□□□ -0.22
TGFB1-204ENST00000600196 C17orf102A2RUQ5 167 aa13.68□□□□□ -0.22
TGFB1-204ENST00000600196 ARHGEF35A5YM69 484 aa13.68□□□□□ -0.22
TGFB1-204ENST00000600196 POLR2DO15514 142 aaKnown RBP13.68□□□□□ -0.22
TGFB1-204ENST00000600196 SORBS3O60504 671 aa13.68□□□□□ -0.22
TGFB1-204ENST00000600196 ZNF202O95125 648 aa13.68□□□□□ -0.22
TGFB1-204ENST00000600196 PLA2G4BP0C869 781 aa13.68□□□□□ -0.22
TGFB1-204ENST00000600196 ZNF286BP0CG31 522 aa13.68□□□□□ -0.22
TGFB1-204ENST00000600196 PLCG1P19174 1290 aa13.68□□□□□ -0.22
TGFB1-204ENST00000600196 POU5F1BQ06416 359 aa13.68□□□□□ -0.22
TGFB1-204ENST00000600196 GRIK4Q16099 956 aa13.68□□□□□ -0.22
TGFB1-204ENST00000600196 ECM1Q16610 540 aa13.68□□□□□ -0.22
TGFB1-204ENST00000600196 NAALADL2Q58DX5 795 aa13.68□□□□□ -0.22
TGFB1-204ENST00000600196 XKR9Q5GH70 373 aa13.68□□□□□ -0.22
TGFB1-204ENST00000600196 SPECC1Q5M775 1068 aa13.68□□□□□ -0.22
TGFB1-204ENST00000600196 IER5Q5VY09 327 aa13.68□□□□□ -0.22
TGFB1-204ENST00000600196 SLC39A5Q6ZMH5 540 aa13.68□□□□□ -0.22
TGFB1-204ENST00000600196 SLC17A8Q8NDX2 589 aa13.68□□□□□ -0.22
TGFB1-204ENST00000600196 VTI1AQ96AJ9 217 aa13.68□□□□□ -0.22
TGFB1-204ENST00000600196 WRAP73Q9P2S5 460 aaPredicted RBP13.68□□□□□ -0.22
TGFB1-204ENST00000600196 ODF2LQ9ULJ1 636 aa13.68□□□□□ -0.22
TGFB1-204ENST00000600196 PHLPP2Q6ZVD8 1323 aa13.67□□□□□ -0.22
TGFB1-204ENST00000600196 FRMPD3Q5JV73 1810 aa13.67□□□□□ -0.22
TGFB1-204ENST00000600196 A0A1B0GVL5 298 aa13.67□□□□□ -0.22
TGFB1-204ENST00000600196 TLR3O15455 904 aaKnown RBP13.67□□□□□ -0.22
TGFB1-204ENST00000600196 PARNO95453 639 aaKnown RBP13.67□□□□□ -0.22
TGFB1-204ENST00000600196 NDUFA8P51970 172 aa13.67□□□□□ -0.22
TGFB1-204ENST00000600196 SLC12A3P55017 1021 aa13.67□□□□□ -0.22
TGFB1-204ENST00000600196 RBL2Q08999 1139 aa13.67□□□□□ -0.22
TGFB1-204ENST00000600196 TBC1D8BQ0IIM8 1120 aa13.67□□□□□ -0.22
TGFB1-204ENST00000600196 PTK7Q13308 1070 aa13.67□□□□□ -0.22
TGFB1-204ENST00000600196 SNW1Q13573 536 aaKnown RBP13.67□□□□□ -0.22
TGFB1-204ENST00000600196 MXD4Q14582 209 aaPredicted RBP13.67□□□□□ -0.22
TGFB1-204ENST00000600196 POTEGQ6S5H5 508 aa13.67□□□□□ -0.22
TGFB1-204ENST00000600196 PADI6Q6TGC4 694 aa13.67□□□□□ -0.22
TGFB1-204ENST00000600196 MTHFD1LQ6UB35 978 aa13.67□□□□□ -0.22
TGFB1-204ENST00000600196 C1orf186Q6ZWK4 172 aa13.67□□□□□ -0.22
TGFB1-204ENST00000600196 RSPH3Q86UC2 560 aa13.67□□□□□ -0.22
TGFB1-204ENST00000600196 TRIM50Q86XT4 487 aa13.67□□□□□ -0.22
TGFB1-204ENST00000600196 KIFAP3Q92845 792 aa13.67□□□□□ -0.22
TGFB1-204ENST00000600196 CHAMP1Q96JM3 812 aa13.67□□□□□ -0.22
TGFB1-204ENST00000600196 BHMT2Q9H2M3 363 aa13.67□□□□□ -0.22
TGFB1-204ENST00000600196 HDAC6Q9UBN7 1215 aa13.67□□□□□ -0.22
TGFB1-204ENST00000600196 SEPT9Q9UHD8 586 aaPredicted RBP13.67□□□□□ -0.22
TGFB1-204ENST00000600196 GRIN2DO15399 1336 aa13.66□□□□□ -0.22
TGFB1-204ENST00000600196 PVALEFA0A1B0GWK0 134 aa13.66□□□□□ -0.22
TGFB1-204ENST00000600196 ZBTB42B2RXF5 422 aa13.66□□□□□ -0.22
TGFB1-204ENST00000600196 C22orf31O95567 290 aa13.66□□□□□ -0.22
TGFB1-204ENST00000600196 PTGS1P23219 599 aa13.66□□□□□ -0.22
TGFB1-204ENST00000600196 KLRC1P26715 233 aa13.66□□□□□ -0.22
TGFB1-204ENST00000600196 PSMC6P62333 389 aa13.66□□□□□ -0.22
TGFB1-204ENST00000600196 PCBP1Q15365 356 aaKnown RBP eCLIP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms