RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 C16orf59Q7L2K0 433 aa15.4■□□□□ 0.06
VRK3-219ENST00000600137 CKAP2LQ8IYA6 745 aa15.4■□□□□ 0.06
VRK3-219ENST00000600137 NEK9Q8TD19 979 aa15.4■□□□□ 0.06
VRK3-219ENST00000600137 BADQ92934 168 aa15.4■□□□□ 0.06
VRK3-219ENST00000600137 OSBPL7Q9BZF2 842 aa15.4■□□□□ 0.06
VRK3-219ENST00000600137 PPP1R12CQ9BZL4 782 aa15.4■□□□□ 0.06
VRK3-219ENST00000600137 HIPK3Q9H422 1215 aa15.4■□□□□ 0.06
VRK3-219ENST00000600137 TUFT1Q9NNX1 390 aa15.4■□□□□ 0.06
VRK3-219ENST00000600137 TUBE1Q9UJT0 475 aa15.4■□□□□ 0.06
VRK3-219ENST00000600137 SRPRBQ9Y5M8 271 aaKnown RBP15.4■□□□□ 0.06
VRK3-219ENST00000600137 IQCF3P0C7M6 154 aa15.39■□□□□ 0.05
VRK3-219ENST00000600137 XRCC6P12956 609 aaKnown RBP eCLIP15.39■□□□□ 0.05
VRK3-219ENST00000600137 RAG1P15918 1043 aa15.39■□□□□ 0.05
VRK3-219ENST00000600137 MAGEA10P43363 369 aaPredicted RBP15.39■□□□□ 0.05
VRK3-219ENST00000600137 EPHB4P54760 987 aa15.39■□□□□ 0.05
VRK3-219ENST00000600137 DNM1Q05193 864 aaKnown RBP15.39■□□□□ 0.05
VRK3-219ENST00000600137 MBTPS1Q14703 1052 aa15.39■□□□□ 0.05
VRK3-219ENST00000600137 HYIQ5T013 277 aa15.39■□□□□ 0.05
VRK3-219ENST00000600137 ZNF618Q5T7W0 954 aa15.39■□□□□ 0.05
VRK3-219ENST00000600137 PLA2G4FQ68DD2 849 aa15.39■□□□□ 0.05
VRK3-219ENST00000600137 USP49Q70CQ1 688 aa15.39■□□□□ 0.05
VRK3-219ENST00000600137 KIAA0319LQ8IZA0 1049 aa15.39■□□□□ 0.05
VRK3-219ENST00000600137 CAGE1Q8TC20 777 aa15.39■□□□□ 0.05
VRK3-219ENST00000600137 LRRC15Q8TF66 581 aa15.39■□□□□ 0.05
VRK3-219ENST00000600137 TNPO1Q92973 898 aaKnown RBP15.39■□□□□ 0.05
VRK3-219ENST00000600137 ZNF396Q96N95 335 aaPredicted RBP15.39■□□□□ 0.05
VRK3-219ENST00000600137 PNMA5Q96PV4 448 aa15.39■□□□□ 0.05
VRK3-219ENST00000600137 DAXXQ9UER7 740 aaPredicted RBP15.39■□□□□ 0.05
VRK3-219ENST00000600137 RCOR1Q9UKL0 485 aa15.39■□□□□ 0.05
VRK3-219ENST00000600137 CEP131Q9UPN4 1083 aa15.39■□□□□ 0.05
VRK3-219ENST00000600137 SIP14410 1827 aa15.38■□□□□ 0.05
VRK3-219ENST00000600137 ARID2Q68CP9 1835 aa15.38■□□□□ 0.05
VRK3-219ENST00000600137 SMIM35A0A1B0GVV1 85 aa15.38■□□□□ 0.05
VRK3-219ENST00000600137 DKC1O60832 514 aaKnown RBP eCLIP15.38■□□□□ 0.05
VRK3-219ENST00000600137 MUTP22033 750 aa15.38■□□□□ 0.05
VRK3-219ENST00000600137 YWHABP31946 246 aaKnown RBP15.38■□□□□ 0.05
VRK3-219ENST00000600137 CCL23P55773 120 aa15.38■□□□□ 0.05
VRK3-219ENST00000600137 MTERF2Q49AM1 385 aa15.38■□□□□ 0.05
VRK3-219ENST00000600137 FAM26DQ5JW98 314 aa15.38■□□□□ 0.05
VRK3-219ENST00000600137 ATL3Q6DD88 541 aa15.38■□□□□ 0.05
VRK3-219ENST00000600137 POTEGQ6S5H5 508 aa15.38■□□□□ 0.05
VRK3-219ENST00000600137 KCNK18Q7Z418 384 aa15.38■□□□□ 0.05
VRK3-219ENST00000600137 PIGOQ8TEQ8 1089 aa15.38■□□□□ 0.05
VRK3-219ENST00000600137 DNAJB3Q8WWF6 145 aa15.38■□□□□ 0.05
VRK3-219ENST00000600137 SCLYQ96I15 445 aa15.38■□□□□ 0.05
VRK3-219ENST00000600137 CLIC6Q96NY7 704 aa15.38■□□□□ 0.05
VRK3-219ENST00000600137 DHX33Q9H6R0 707 aaKnown RBP15.38■□□□□ 0.05
VRK3-219ENST00000600137 CYP26B1Q9NR63 512 aa15.38■□□□□ 0.05
VRK3-219ENST00000600137 ANKEF1Q9NU02 776 aa15.38■□□□□ 0.05
VRK3-219ENST00000600137 SEPT9Q9UHD8 586 aaPredicted RBP15.38■□□□□ 0.05
VRK3-219ENST00000600137 NOD1Q9Y239 953 aa15.38■□□□□ 0.05
VRK3-219ENST00000600137 MAFO75444 373 aaPredicted RBP15.37■□□□□ 0.05
VRK3-219ENST00000600137 YEATS4O95619 227 aa15.37■□□□□ 0.05
VRK3-219ENST00000600137 CHRNA1P02708 482 aa15.37■□□□□ 0.05
VRK3-219ENST00000600137 LONP1P36776 959 aaKnown RBP15.37■□□□□ 0.05
VRK3-219ENST00000600137 ANP32AP39687 249 aaKnown RBP15.37■□□□□ 0.05
VRK3-219ENST00000600137 CCT6AP40227 531 aaKnown RBP15.37■□□□□ 0.05
VRK3-219ENST00000600137 RARRES1P49788 294 aa15.37■□□□□ 0.05
VRK3-219ENST00000600137 MDM2Q00987 491 aaPredicted RBP15.37■□□□□ 0.05
VRK3-219ENST00000600137 MGAT3Q09327 533 aa15.37■□□□□ 0.05
VRK3-219ENST00000600137 GRB10Q13322 594 aa15.37■□□□□ 0.05
VRK3-219ENST00000600137 DRP2Q13474 957 aa15.37■□□□□ 0.05
VRK3-219ENST00000600137 BFSP2Q13515 415 aa15.37■□□□□ 0.05
VRK3-219ENST00000600137 AXDND1Q5T1B0 1012 aaPredicted RBP15.37■□□□□ 0.05
VRK3-219ENST00000600137 TAF2Q6P1X5 1199 aa15.37■□□□□ 0.05
VRK3-219ENST00000600137 ERMNQ8TAM6 284 aa15.37■□□□□ 0.05
VRK3-219ENST00000600137 SNX29Q8TEQ0 813 aa15.37■□□□□ 0.05
VRK3-219ENST00000600137 AK8Q96MA6 479 aa15.37■□□□□ 0.05
VRK3-219ENST00000600137 CSRNP2Q9H175 543 aa15.37■□□□□ 0.05
VRK3-219ENST00000600137 XPNPEP1Q9NQW7 623 aa15.37■□□□□ 0.05
VRK3-219ENST00000600137 TANC1Q9C0D5 1861 aa15.37■□□□□ 0.05
VRK3-219ENST00000600137 SPTLC2O15270 562 aa15.36■□□□□ 0.05
VRK3-219ENST00000600137 MAGEB2O15479 319 aa15.36■□□□□ 0.05
VRK3-219ENST00000600137 NBNO60934 754 aa15.36■□□□□ 0.05
VRK3-219ENST00000600137 PPP6R2O75170 966 aa15.36■□□□□ 0.05
VRK3-219ENST00000600137 CSF2RAP15509 400 aa15.36■□□□□ 0.05
VRK3-219ENST00000600137 SELPP16109 830 aa15.36■□□□□ 0.05
VRK3-219ENST00000600137 THPOP40225 353 aa15.36■□□□□ 0.05
VRK3-219ENST00000600137 NUCB2P80303 420 aa15.36■□□□□ 0.05
VRK3-219ENST00000600137 TMEM119Q4V9L6 283 aa15.36■□□□□ 0.05
VRK3-219ENST00000600137 SPECC1Q5M775 1068 aa15.36■□□□□ 0.05
VRK3-219ENST00000600137 EFCAB12Q6NXP0 572 aa15.36■□□□□ 0.05
VRK3-219ENST00000600137 EPSTI1Q96J88 318 aa15.36■□□□□ 0.05
VRK3-219ENST00000600137 CEP170P1Q96L14 293 aa15.36■□□□□ 0.05
VRK3-219ENST00000600137 NACC1Q96RE7 527 aa15.36■□□□□ 0.05
VRK3-219ENST00000600137 RAB34Q9BZG1 259 aa15.36■□□□□ 0.05
VRK3-219ENST00000600137 CCSER1Q9C0I3 900 aa15.36■□□□□ 0.05
VRK3-219ENST00000600137 CDHR5Q9HBB8 845 aa15.36■□□□□ 0.05
VRK3-219ENST00000600137 PRKAG2Q9UGJ0 569 aa15.36■□□□□ 0.05
VRK3-219ENST00000600137 DBR1Q9UK59 544 aaKnown RBP15.36■□□□□ 0.05
VRK3-219ENST00000600137 KIAA1024Q9UPX6 916 aa15.36■□□□□ 0.05
VRK3-219ENST00000600137 STK24Q9Y6E0 443 aa15.36■□□□□ 0.05
VRK3-219ENST00000600137 LOXHD1Q8IVV2 1947 aa15.36■□□□□ 0.05
VRK3-219ENST00000600137 E9PMD0 336 aa15.35■□□□□ 0.05
VRK3-219ENST00000600137 CAND2O75155 1236 aa15.35■□□□□ 0.05
VRK3-219ENST00000600137 CXCL10P02778 98 aa15.35■□□□□ 0.05
VRK3-219ENST00000600137 BMP8BP34820 402 aa15.35■□□□□ 0.05
VRK3-219ENST00000600137 CLCN3P51790 818 aa15.35■□□□□ 0.05
VRK3-219ENST00000600137 TBC1D8BQ0IIM8 1120 aa15.35■□□□□ 0.05
VRK3-219ENST00000600137 STK38Q15208 465 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms