RNA–Protein interactions for RNA: ENST00000597304.5

ZNF558-205, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 2,612 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-205ENST00000597304 NAA25Q14CX7 972 aa13.69□□□□□ -0.22
ZNF558-205ENST00000597304 DENND2CQ68D51 928 aa13.69□□□□□ -0.22
ZNF558-205ENST00000597304 CRELD2Q6UXH1 353 aaPredicted RBP13.69□□□□□ -0.22
ZNF558-205ENST00000597304 EP400NLQ6ZTU2 488 aa13.69□□□□□ -0.22
ZNF558-205ENST00000597304 FMNL3Q8IVF7 1028 aa13.69□□□□□ -0.22
ZNF558-205ENST00000597304 TCP11Q8WWU5 503 aa13.69□□□□□ -0.22
ZNF558-205ENST00000597304 COA7Q96BR5 231 aa13.69□□□□□ -0.22
ZNF558-205ENST00000597304 PGM2Q96G03 612 aa13.69□□□□□ -0.22
ZNF558-205ENST00000597304 SAP30BPQ9UHR5 308 aaKnown RBP13.69□□□□□ -0.22
ZNF558-205ENST00000597304 TTC7AQ9ULT0 858 aaPredicted RBP13.69□□□□□ -0.22
ZNF558-205ENST00000597304 NENFQ9UMX5 172 aa13.69□□□□□ -0.22
ZNF558-205ENST00000597304 CFAP73A6NFT4 308 aa13.68□□□□□ -0.22
ZNF558-205ENST00000597304 CCDC169A6NNP5 214 aa13.68□□□□□ -0.22
ZNF558-205ENST00000597304 E9PMD0 336 aa13.68□□□□□ -0.22
ZNF558-205ENST00000597304 BAG3O95817 575 aa13.68□□□□□ -0.22
ZNF558-205ENST00000597304 PAX7P23759 505 aa13.68□□□□□ -0.22
ZNF558-205ENST00000597304 PON1P27169 355 aa13.68□□□□□ -0.22
ZNF558-205ENST00000597304 PMS2P54278 862 aa13.68□□□□□ -0.22
ZNF558-205ENST00000597304 SLC8A3P57103 927 aa13.68□□□□□ -0.22
ZNF558-205ENST00000597304 PTENP60484 403 aa13.68□□□□□ -0.22
ZNF558-205ENST00000597304 DR1Q01658 176 aa13.68□□□□□ -0.22
ZNF558-205ENST00000597304 DPY19L2P1Q6NXN4 242 aa13.68□□□□□ -0.22
ZNF558-205ENST00000597304 PIGWQ7Z7B1 504 aa13.68□□□□□ -0.22
ZNF558-205ENST00000597304 GPBP1Q86WP2 473 aa13.68□□□□□ -0.22
ZNF558-205ENST00000597304 FAXDC2Q96IV6 333 aa13.68□□□□□ -0.22
ZNF558-205ENST00000597304 PABPC3Q9H361 631 aaKnown RBP13.68□□□□□ -0.22
ZNF558-205ENST00000597304 ARMCX3Q9UH62 379 aaPredicted RBP13.68□□□□□ -0.22
ZNF558-205ENST00000597304 DDX25Q9UHL0 483 aaKnown RBP13.68□□□□□ -0.22
ZNF558-205ENST00000597304 NPHP3-ACAD11A0A0J9YXS1 232 aa13.68□□□□□ -0.22
ZNF558-205ENST00000597304 GOLGA6L10A0A0M3HER8 536 aa13.68□□□□□ -0.22
ZNF558-205ENST00000597304 SPDYE3A6NKU9 549 aa13.68□□□□□ -0.22
ZNF558-205ENST00000597304 LDHBP07195 334 aaKnown RBP13.68□□□□□ -0.22
ZNF558-205ENST00000597304 CLTAP09496 248 aa13.68□□□□□ -0.22
ZNF558-205ENST00000597304 RIPK1Q13546 671 aa13.68□□□□□ -0.22
ZNF558-205ENST00000597304 PPP2R5EQ16537 467 aa13.68□□□□□ -0.22
ZNF558-205ENST00000597304 ACCSLQ4AC99 568 aa13.68□□□□□ -0.22
ZNF558-205ENST00000597304 HYIQ5T013 277 aa13.68□□□□□ -0.22
ZNF558-205ENST00000597304 FRMD5Q7Z6J6 570 aa13.68□□□□□ -0.22
ZNF558-205ENST00000597304 PNMA8AQ86V59 439 aaPredicted RBP13.68□□□□□ -0.22
ZNF558-205ENST00000597304 LRRC34Q8IZ02 419 aa13.68□□□□□ -0.22
ZNF558-205ENST00000597304 CCHCR1Q8TD31 782 aa13.68□□□□□ -0.22
ZNF558-205ENST00000597304 NSRP1Q9H0G5 558 aaKnown RBP13.68□□□□□ -0.22
ZNF558-205ENST00000597304 RIOX1Q9H6W3 641 aa13.68□□□□□ -0.22
ZNF558-205ENST00000597304 INTS9Q9NV88 658 aaKnown RBP13.68□□□□□ -0.22
ZNF558-205ENST00000597304 BTG4Q9NY30 223 aa13.68□□□□□ -0.22
ZNF558-205ENST00000597304 DAAM1Q9Y4D1 1078 aa13.68□□□□□ -0.22
ZNF558-205ENST00000597304 MYH14Q7Z406 1995 aaKnown RBP13.68□□□□□ -0.22
ZNF558-205ENST00000597304 TLDC2A0PJX2 215 aa13.67□□□□□ -0.22
ZNF558-205ENST00000597304 RGS16O15492 202 aaPredicted RBP13.67□□□□□ -0.22
ZNF558-205ENST00000597304 NEBLO76041 1014 aa13.67□□□□□ -0.22
ZNF558-205ENST00000597304 ECM2O94769 699 aaPredicted RBP13.67□□□□□ -0.22
ZNF558-205ENST00000597304 KRT18P05783 430 aaKnown RBP13.67□□□□□ -0.22
ZNF558-205ENST00000597304 PLA2G4BP0C869 781 aa13.67□□□□□ -0.22
ZNF558-205ENST00000597304 XRCC5P13010 732 aaKnown RBP13.67□□□□□ -0.22
ZNF558-205ENST00000597304 PRPF4BQ13523 1007 aaKnown RBP13.67□□□□□ -0.22
ZNF558-205ENST00000597304 TRPM8Q7Z2W7 1104 aa13.67□□□□□ -0.22
ZNF558-205ENST00000597304 MAPKAPK5Q8IW41 473 aa13.67□□□□□ -0.22
ZNF558-205ENST00000597304 NEDD1Q8NHV4 660 aa13.67□□□□□ -0.22
ZNF558-205ENST00000597304 U2AF1L4Q8WU68 220 aaKnown RBP13.67□□□□□ -0.22
ZNF558-205ENST00000597304 ZNF622Q969S3 477 aaKnown RBP eCLIP13.67□□□□□ -0.223e-6■□□□□ 10
ZNF558-205ENST00000597304 STAMBPL1Q96FJ0 436 aa13.67□□□□□ -0.22
ZNF558-205ENST00000597304 ERP44Q9BS26 406 aa13.67□□□□□ -0.22
ZNF558-205ENST00000597304 TRIM6Q9C030 488 aaPredicted RBP13.67□□□□□ -0.22
ZNF558-205ENST00000597304 ANKRD2Q9GZV1 360 aa13.67□□□□□ -0.22
ZNF558-205ENST00000597304 EPB41L4BQ9H329 900 aa13.67□□□□□ -0.22
ZNF558-205ENST00000597304 ZHX3Q9H4I2 956 aa13.67□□□□□ -0.22
ZNF558-205ENST00000597304 EBF2Q9HAK2 575 aa13.67□□□□□ -0.22
ZNF558-205ENST00000597304 PCDHA12Q9UN75 941 aa13.67□□□□□ -0.22
ZNF558-205ENST00000597304 KIAA1024Q9UPX6 916 aa13.67□□□□□ -0.22
ZNF558-205ENST00000597304 DIS3Q9Y2L1 958 aaKnown RBP13.67□□□□□ -0.22
ZNF558-205ENST00000597304 AFF2P51816 1311 aa13.67□□□□□ -0.22
ZNF558-205ENST00000597304 CCDC189A1A4V9 331 aa13.67□□□□□ -0.22
ZNF558-205ENST00000597304 USP17L5A8MUK1 530 aa13.67□□□□□ -0.22
ZNF558-205ENST00000597304 CDK8P49336 464 aa13.67□□□□□ -0.22
ZNF558-205ENST00000597304 SF3A3Q12874 501 aaKnown RBP eCLIP13.67□□□□□ -0.22
ZNF558-205ENST00000597304 DCAF17Q5H9S7 520 aaPredicted RBP13.67□□□□□ -0.22
ZNF558-205ENST00000597304 DUPD1Q68J44 220 aa13.67□□□□□ -0.22
ZNF558-205ENST00000597304 TBC1D1Q86TI0 1168 aaPredicted RBP13.67□□□□□ -0.22
ZNF558-205ENST00000597304 HAS1Q92839 578 aa13.67□□□□□ -0.22
ZNF558-205ENST00000597304 GJA10Q969M2 543 aa13.67□□□□□ -0.22
ZNF558-205ENST00000597304 NAP1L3Q99457 506 aaPredicted RBP13.67□□□□□ -0.22
ZNF558-205ENST00000597304 ELAC2Q9BQ52 826 aaKnown RBP13.67□□□□□ -0.22
ZNF558-205ENST00000597304 ADAM7Q9H2U9 754 aa13.67□□□□□ -0.22
ZNF558-205ENST00000597304 AZI2Q9H6S1 392 aa13.67□□□□□ -0.22
ZNF558-205ENST00000597304 ZDHHC18Q9NUE0 388 aa13.67□□□□□ -0.22
ZNF558-205ENST00000597304 DDX60LQ5H9U9 1706 aaKnown RBP13.66□□□□□ -0.22
ZNF558-205ENST00000597304 SMIM23A6NLE4 172 aa13.66□□□□□ -0.22
ZNF558-205ENST00000597304 DDX3XO00571 662 aaKnown RBP eCLIP13.66□□□□□ -0.22
ZNF558-205ENST00000597304 RPS8P62241 208 aaKnown RBP13.66□□□□□ -0.22
ZNF558-205ENST00000597304 MYO1EQ12965 1108 aa13.66□□□□□ -0.22
ZNF558-205ENST00000597304 FAM133BQ5BKY9 247 aaKnown RBP13.66□□□□□ -0.22
ZNF558-205ENST00000597304 NSMCE1Q8WV22 266 aa13.66□□□□□ -0.22
ZNF558-205ENST00000597304 CEP95Q96GE4 821 aa13.66□□□□□ -0.22
ZNF558-205ENST00000597304 PRMT1Q99873 361 aaKnown RBP13.66□□□□□ -0.22
ZNF558-205ENST00000597304 NR2E1Q9Y466 385 aa13.66□□□□□ -0.22
ZNF558-205ENST00000597304 FRMPD2Q68DX3 1309 aaPredicted RBP13.66□□□□□ -0.22
ZNF558-205ENST00000597304 FAM187AA6NFU0 413 aa13.66□□□□□ -0.22
ZNF558-205ENST00000597304 MYCNP04198 464 aaPredicted RBP13.66□□□□□ -0.22
ZNF558-205ENST00000597304 VIMP08670 466 aaKnown RBP13.66□□□□□ -0.22
ZNF558-205ENST00000597304 CYP11B2P19099 503 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms