RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 MAD2L2Q9UI95 211 aa17.83■□□□□ 0.44
LIG1-214ENST00000597146 R4GN57 208 aa17.83■□□□□ 0.44
LIG1-214ENST00000597146 CFAP47Q6ZTR5 3102 aa17.83■□□□□ 0.44
LIG1-214ENST00000597146 ATP9AO75110 1047 aa17.82■□□□□ 0.44
LIG1-214ENST00000597146 FGFR1P11362 822 aa17.82■□□□□ 0.44
LIG1-214ENST00000597146 INSRRP14616 1297 aa17.82■□□□□ 0.44
LIG1-214ENST00000597146 LAG3P18627 525 aa17.82■□□□□ 0.44
LIG1-214ENST00000597146 PDE1AP54750 535 aa17.82■□□□□ 0.44
LIG1-214ENST00000597146 ITIH3Q06033 890 aa17.82■□□□□ 0.44
LIG1-214ENST00000597146 NFX1Q12986 1120 aaKnown RBP17.82■□□□□ 0.44
LIG1-214ENST00000597146 RARS2Q5T160 578 aaKnown RBP17.82■□□□□ 0.44
LIG1-214ENST00000597146 KANK3Q6NY19 840 aa17.82■□□□□ 0.44
LIG1-214ENST00000597146 ZDHHC14Q8IZN3 488 aa17.82■□□□□ 0.44
LIG1-214ENST00000597146 CELF4Q9BZC1 486 aaKnown RBP17.82■□□□□ 0.44
LIG1-214ENST00000597146 PKD2L1Q9P0L9 805 aa17.82■□□□□ 0.44
LIG1-214ENST00000597146 ZSWIM5Q9P217 1185 aa17.82■□□□□ 0.44
LIG1-214ENST00000597146 LZTS1Q9Y250 596 aa17.82■□□□□ 0.44
LIG1-214ENST00000597146 ZNF213O14771 459 aa17.81■□□□□ 0.44
LIG1-214ENST00000597146 IGHDP01880 384 aa17.81■□□□□ 0.44
LIG1-214ENST00000597146 KCNA2P16389 499 aa17.81■□□□□ 0.44
LIG1-214ENST00000597146 PDE4AP27815 886 aa17.81■□□□□ 0.44
LIG1-214ENST00000597146 CHD1LQ86WJ1 897 aa17.81■□□□□ 0.44
LIG1-214ENST00000597146 C12orf76Q8N812 135 aaPredicted RBP17.81■□□□□ 0.44
LIG1-214ENST00000597146 RILPL2Q969X0 211 aa17.81■□□□□ 0.44
LIG1-214ENST00000597146 USP24Q9UPU5 2620 aa17.81■□□□□ 0.44
LIG1-214ENST00000597146 MTHFRP42898 656 aa17.8■□□□□ 0.44
LIG1-214ENST00000597146 PLCB3Q01970 1234 aa17.8■□□□□ 0.44
LIG1-214ENST00000597146 IFIT1BQ5T764 474 aaKnown RBP17.8■□□□□ 0.44
LIG1-214ENST00000597146 PCNX4Q63HM2 1172 aa17.8■□□□□ 0.44
LIG1-214ENST00000597146 TMC7Q7Z402 723 aa17.8■□□□□ 0.44
LIG1-214ENST00000597146 CYP2W1Q8TAV3 490 aa17.8■□□□□ 0.44
LIG1-214ENST00000597146 SEPT1Q8WYJ6 367 aa17.8■□□□□ 0.44
LIG1-214ENST00000597146 ADAM2Q99965 735 aa17.8■□□□□ 0.44
LIG1-214ENST00000597146 HINFPQ9BQA5 517 aa17.8■□□□□ 0.44
LIG1-214ENST00000597146 ERVK-5Q9HDB9 667 aa17.8■□□□□ 0.44
LIG1-214ENST00000597146 NGRNQ9NPE2 291 aaKnown RBP17.8■□□□□ 0.44
LIG1-214ENST00000597146 DBR1Q9UK59 544 aaKnown RBP17.8■□□□□ 0.44
LIG1-214ENST00000597146 GINS2Q9Y248 185 aa17.8■□□□□ 0.44
LIG1-214ENST00000597146 GPR179Q6PRD1 2367 aa17.8■□□□□ 0.44
LIG1-214ENST00000597146 DENND3A2RUS2 1198 aa17.79■□□□□ 0.44
LIG1-214ENST00000597146 PALM3A6NDB9 673 aaPredicted RBP17.79■□□□□ 0.44
LIG1-214ENST00000597146 C9IYK1 514 aa17.79■□□□□ 0.44
LIG1-214ENST00000597146 RPLP2P05387 115 aaKnown RBP17.79■□□□□ 0.44
LIG1-214ENST00000597146 KRT76Q01546 638 aa17.79■□□□□ 0.44
LIG1-214ENST00000597146 LRRC55Q6ZSA7 311 aa17.79■□□□□ 0.44
LIG1-214ENST00000597146 SMC5Q8IY18 1101 aa17.79■□□□□ 0.44
LIG1-214ENST00000597146 SIX5Q8N196 739 aa17.79■□□□□ 0.44
LIG1-214ENST00000597146 TMEM40Q8WWA1 233 aa17.79■□□□□ 0.44
LIG1-214ENST00000597146 RIN2Q8WYP3 895 aaPredicted RBP17.79■□□□□ 0.44
LIG1-214ENST00000597146 PCYT2Q99447 389 aa17.79■□□□□ 0.44
LIG1-214ENST00000597146 SMARCAD1Q9H4L7 1026 aa17.79■□□□□ 0.44
LIG1-214ENST00000597146 DLL3Q9NYJ7 618 aa17.79■□□□□ 0.44
LIG1-214ENST00000597146 PUF60Q9UHX1 559 aaKnown RBP17.79■□□□□ 0.44
LIG1-214ENST00000597146 NOC2LQ9Y3T9 749 aaKnown RBP17.79■□□□□ 0.44
LIG1-214ENST00000597146 KDM3AQ9Y4C1 1321 aa17.78■□□□□ 0.44
LIG1-214ENST00000597146 C2orf71A6NGG8 1288 aa17.78■□□□□ 0.44
LIG1-214ENST00000597146 RRN3P2A6NIE6 340 aa17.78■□□□□ 0.44
LIG1-214ENST00000597146 CYTH3O43739 400 aa17.78■□□□□ 0.44
LIG1-214ENST00000597146 CLASP2O75122 1294 aaKnown RBP17.78■□□□□ 0.44
LIG1-214ENST00000597146 KIAA1841Q6NSI8 718 aa17.78■□□□□ 0.44
LIG1-214ENST00000597146 USP17L6PQ6QN14 398 aa17.78■□□□□ 0.44
LIG1-214ENST00000597146 KCNT2Q6UVM3 1135 aa17.78■□□□□ 0.44
LIG1-214ENST00000597146 NLRX1Q86UT6 975 aa17.78■□□□□ 0.44
LIG1-214ENST00000597146 DCLK2Q8N568 766 aa17.78■□□□□ 0.44
LIG1-214ENST00000597146 GIMAP8Q8ND71 665 aaPredicted RBP17.78■□□□□ 0.44
LIG1-214ENST00000597146 PIBF1Q8WXW3 757 aa17.78■□□□□ 0.44
LIG1-214ENST00000597146 RTP3Q9BQQ7 232 aa17.78■□□□□ 0.44
LIG1-214ENST00000597146 UBAC1Q9BSL1 405 aa17.78■□□□□ 0.44
LIG1-214ENST00000597146 RIOX1Q9H6W3 641 aa17.78■□□□□ 0.44
LIG1-214ENST00000597146 RGS18Q9NS28 235 aa17.78■□□□□ 0.44
LIG1-214ENST00000597146 PCDHA2Q9Y5H9 948 aa17.78■□□□□ 0.44
LIG1-214ENST00000597146 BAHCC1Q9P281 2608 aa17.78■□□□□ 0.44
LIG1-214ENST00000597146 EOMESO95936 686 aa17.77■□□□□ 0.44
LIG1-214ENST00000597146 CA8P35219 290 aa17.77■□□□□ 0.44
LIG1-214ENST00000597146 NUCB1Q02818 461 aa17.77■□□□□ 0.44
LIG1-214ENST00000597146 SMC1AQ14683 1233 aaKnown RBP17.77■□□□□ 0.44
LIG1-214ENST00000597146 PLCB4Q15147 1175 aa17.77■□□□□ 0.44
LIG1-214ENST00000597146 SLC24A5Q71RS6 500 aa17.77■□□□□ 0.44
LIG1-214ENST00000597146 PLCD3Q8N3E9 789 aa17.77■□□□□ 0.44
LIG1-214ENST00000597146 SMARCC2Q8TAQ2 1214 aa17.77■□□□□ 0.44
LIG1-214ENST00000597146 CDHR5Q9HBB8 845 aa17.77■□□□□ 0.44
LIG1-214ENST00000597146 C1orf112Q9NSG2 853 aa17.77■□□□□ 0.44
LIG1-214ENST00000597146 FBXL21Q9UKT6 434 aa17.77■□□□□ 0.44
LIG1-214ENST00000597146 RPS6KA5O75582 802 aa17.76■□□□□ 0.43
LIG1-214ENST00000597146 ITGB5P18084 799 aa17.76■□□□□ 0.43
LIG1-214ENST00000597146 NT5C2P49902 561 aa17.76■□□□□ 0.43
LIG1-214ENST00000597146 TRAF1Q13077 416 aa17.76■□□□□ 0.43
LIG1-214ENST00000597146 SEC23AQ15436 765 aa17.76■□□□□ 0.43
LIG1-214ENST00000597146 RSPO4Q2I0M5 234 aaPredicted RBP17.76■□□□□ 0.43
LIG1-214ENST00000597146 MRPL43Q8N983 215 aaKnown RBP17.76■□□□□ 0.43
LIG1-214ENST00000597146 GPRASP2Q96D09 838 aa17.76■□□□□ 0.43
LIG1-214ENST00000597146 ZNF558Q96NG5 402 aa17.76■□□□□ 0.43
LIG1-214ENST00000597146 PPP1R16BQ96T49 567 aa17.76■□□□□ 0.43
LIG1-214ENST00000597146 SEMA4AQ9H3S1 761 aa17.76■□□□□ 0.43
LIG1-214ENST00000597146 ATP6V0A4Q9HBG4 840 aa17.76■□□□□ 0.43
LIG1-214ENST00000597146 CYP26B1Q9NR63 512 aa17.76■□□□□ 0.43
LIG1-214ENST00000597146 RNF19AQ9NV58 838 aa17.76■□□□□ 0.43
LIG1-214ENST00000597146 DUSP12Q9UNI6 340 aa17.76■□□□□ 0.43
LIG1-214ENST00000597146 USTQ9Y2C2 406 aa17.76■□□□□ 0.43
LIG1-214ENST00000597146 PNMA6FA0A0J9YX94 578 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms