RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 PDILTQ8N807 584 aa17.34■□□□□ 0.37
SMCO4-206ENST00000596676 BBXQ8WY36 941 aaPredicted RBP17.34■□□□□ 0.37
SMCO4-206ENST00000596676 CCSER1Q9C0I3 900 aa17.34■□□□□ 0.37
SMCO4-206ENST00000596676 POLD4Q9HCU8 107 aa17.34■□□□□ 0.37
SMCO4-206ENST00000596676 A0A1B0GVL5 298 aa17.33■□□□□ 0.36
SMCO4-206ENST00000596676 CD4P01730 458 aa17.33■□□□□ 0.36
SMCO4-206ENST00000596676 KLRC1P26715 233 aa17.33■□□□□ 0.36
SMCO4-206ENST00000596676 PTGISQ16647 500 aa17.33■□□□□ 0.36
SMCO4-206ENST00000596676 XKR9Q5GH70 373 aa17.33■□□□□ 0.36
SMCO4-206ENST00000596676 RESP18Q5W5W9 173 aa17.33■□□□□ 0.36
SMCO4-206ENST00000596676 SH3RF1Q7Z6J0 888 aa17.33■□□□□ 0.36
SMCO4-206ENST00000596676 SESTD1Q86VW0 696 aa17.33■□□□□ 0.36
SMCO4-206ENST00000596676 DHX38Q92620 1227 aaKnown RBP17.33■□□□□ 0.36
SMCO4-206ENST00000596676 NIFKQ9BYG3 293 aaKnown RBP17.33■□□□□ 0.36
SMCO4-206ENST00000596676 GOLPH3LQ9H4A5 285 aa17.33■□□□□ 0.36
SMCO4-206ENST00000596676 EVPLQ92817 2033 aa17.32■□□□□ 0.36
SMCO4-206ENST00000596676 NRCAMQ92823 1304 aa17.32■□□□□ 0.36
SMCO4-206ENST00000596676 FAAP100Q0VG06 881 aa17.32■□□□□ 0.36
SMCO4-206ENST00000596676 ZNF484Q5JVG2 852 aa17.32■□□□□ 0.36
SMCO4-206ENST00000596676 FAM167AQ96KS9 214 aa17.32■□□□□ 0.36
SMCO4-206ENST00000596676 CEP170P1Q96L14 293 aa17.32■□□□□ 0.36
SMCO4-206ENST00000596676 NACC1Q96RE7 527 aa17.32■□□□□ 0.36
SMCO4-206ENST00000596676 CYP26B1Q9NR63 512 aa17.32■□□□□ 0.36
SMCO4-206ENST00000596676 BLOC1S4Q9NUP1 217 aa17.32■□□□□ 0.36
SMCO4-206ENST00000596676 RRN3P2A6NIE6 340 aa17.31■□□□□ 0.36
SMCO4-206ENST00000596676 DKC1O60832 514 aaKnown RBP eCLIP17.31■□□□□ 0.36
SMCO4-206ENST00000596676 C22orf31O95567 290 aa17.31■□□□□ 0.36
SMCO4-206ENST00000596676 RARRES1P49788 294 aa17.31■□□□□ 0.36
SMCO4-206ENST00000596676 PTPN11Q06124 597 aaPredicted RBP17.31■□□□□ 0.36
SMCO4-206ENST00000596676 DRP2Q13474 957 aa17.31■□□□□ 0.36
SMCO4-206ENST00000596676 DHX8Q14562 1220 aaKnown RBP17.31■□□□□ 0.36
SMCO4-206ENST00000596676 MCM6Q14566 821 aa17.31■□□□□ 0.36
SMCO4-206ENST00000596676 C1orf53Q5VUE5 145 aa17.31■□□□□ 0.36
SMCO4-206ENST00000596676 ADALQ6DHV7 355 aa17.31■□□□□ 0.36
SMCO4-206ENST00000596676 MTHFD1LQ6UB35 978 aa17.31■□□□□ 0.36
SMCO4-206ENST00000596676 ANKRD33Q7Z3H0 272 aa17.31■□□□□ 0.36
SMCO4-206ENST00000596676 LRRC71Q8N4P6 559 aa17.31■□□□□ 0.36
SMCO4-206ENST00000596676 RASSF8Q8NHQ8 419 aa17.31■□□□□ 0.36
SMCO4-206ENST00000596676 CALML4Q96GE6 196 aa17.31■□□□□ 0.36
SMCO4-206ENST00000596676 CDK5RAP3Q96JB5 506 aa17.31■□□□□ 0.36
SMCO4-206ENST00000596676 BHMT2Q9H2M3 363 aa17.31■□□□□ 0.36
SMCO4-206ENST00000596676 ANKEF1Q9NU02 776 aa17.31■□□□□ 0.36
SMCO4-206ENST00000596676 STK24Q9Y6E0 443 aa17.31■□□□□ 0.36
SMCO4-206ENST00000596676 ARID2Q68CP9 1835 aa17.31■□□□□ 0.36
SMCO4-206ENST00000596676 UMODL1Q5DID0 1318 aa17.3■□□□□ 0.36
SMCO4-206ENST00000596676 KDM3AQ9Y4C1 1321 aa17.3■□□□□ 0.36
SMCO4-206ENST00000596676 MBLAC1A4D2B0 266 aaPredicted RBP17.3■□□□□ 0.36
SMCO4-206ENST00000596676 PRPF40AO75400 957 aaKnown RBP17.3■□□□□ 0.36
SMCO4-206ENST00000596676 EYA4O95677 639 aa17.3■□□□□ 0.36
SMCO4-206ENST00000596676 SSBP05455 408 aaKnown RBP eCLIP17.3■□□□□ 0.36
SMCO4-206ENST00000596676 PFKFB1P16118 471 aa17.3■□□□□ 0.36
SMCO4-206ENST00000596676 CMA1P23946 247 aa17.3■□□□□ 0.36
SMCO4-206ENST00000596676 CLCN3P51790 818 aa17.3■□□□□ 0.36
SMCO4-206ENST00000596676 MKRN4PQ13434 485 aaPredicted RBP17.3■□□□□ 0.36
SMCO4-206ENST00000596676 NAALADL2Q58DX5 795 aa17.3■□□□□ 0.36
SMCO4-206ENST00000596676 MAEAQ7L5Y9 396 aa17.3■□□□□ 0.36
SMCO4-206ENST00000596676 OTUD6AQ7L8S5 288 aa17.3■□□□□ 0.36
SMCO4-206ENST00000596676 C7orf61Q8IZ16 206 aa17.3■□□□□ 0.36
SMCO4-206ENST00000596676 FSIP1Q8NA03 581 aa17.3■□□□□ 0.36
SMCO4-206ENST00000596676 ZNF668Q96K58 619 aaPredicted RBP17.3■□□□□ 0.36
SMCO4-206ENST00000596676 FAM49AQ9H0Q0 323 aaPredicted RBP17.3■□□□□ 0.36
SMCO4-206ENST00000596676 TUBE1Q9UJT0 475 aa17.3■□□□□ 0.36
SMCO4-206ENST00000596676 DBR1Q9UK59 544 aaKnown RBP17.3■□□□□ 0.36
SMCO4-206ENST00000596676 DNM3Q9UQ16 869 aa17.3■□□□□ 0.36
SMCO4-206ENST00000596676 COL1A2P08123 1366 aa17.29■□□□□ 0.36
SMCO4-206ENST00000596676 NPHP3-ACAD11A0A0J9YXS1 232 aa17.29■□□□□ 0.36
SMCO4-206ENST00000596676 TRIM43BA6NCK2 446 aa17.29■□□□□ 0.36
SMCO4-206ENST00000596676 USO1O60763 962 aaKnown RBP17.29■□□□□ 0.36
SMCO4-206ENST00000596676 PLA2G4BP0C869 781 aa17.29■□□□□ 0.36
SMCO4-206ENST00000596676 MUTP22033 750 aa17.29■□□□□ 0.36
SMCO4-206ENST00000596676 NDUFA8P51970 172 aa17.29■□□□□ 0.36
SMCO4-206ENST00000596676 TRIM71Q2Q1W2 868 aaKnown RBP17.29■□□□□ 0.36
SMCO4-206ENST00000596676 RRAGBQ5VZM2 374 aa17.29■□□□□ 0.36
SMCO4-206ENST00000596676 EFCAB12Q6NXP0 572 aa17.29■□□□□ 0.36
SMCO4-206ENST00000596676 CLEC17AQ6ZS10 378 aa17.29■□□□□ 0.36
SMCO4-206ENST00000596676 SERINC5Q86VE9 423 aa17.29■□□□□ 0.36
SMCO4-206ENST00000596676 METTL13Q8N6R0 699 aa17.29■□□□□ 0.36
SMCO4-206ENST00000596676 DNAJB3Q8WWF6 145 aa17.29■□□□□ 0.36
SMCO4-206ENST00000596676 STAMQ92783 540 aa17.29■□□□□ 0.36
SMCO4-206ENST00000596676 TMEM143Q96AN5 459 aa17.29■□□□□ 0.36
SMCO4-206ENST00000596676 TRIM43Q96BQ3 446 aaPredicted RBP17.29■□□□□ 0.36
SMCO4-206ENST00000596676 DHX58Q96C10 678 aa17.29■□□□□ 0.36
SMCO4-206ENST00000596676 PPP1R16BQ96T49 567 aa17.29■□□□□ 0.36
SMCO4-206ENST00000596676 SUGCTQ9HAC7 445 aa17.29■□□□□ 0.36
SMCO4-206ENST00000596676 XPNPEP1Q9NQW7 623 aa17.29■□□□□ 0.36
SMCO4-206ENST00000596676 NOD1Q9Y239 953 aa17.29■□□□□ 0.36
SMCO4-206ENST00000596676 ARHGEF35A5YM69 484 aa17.28■□□□□ 0.36
SMCO4-206ENST00000596676 DCDC2CA8MYV0 355 aa17.28■□□□□ 0.36
SMCO4-206ENST00000596676 POLR2DO15514 142 aaKnown RBP17.28■□□□□ 0.36
SMCO4-206ENST00000596676 XRCC6P12956 609 aaKnown RBP eCLIP17.28■□□□□ 0.36
SMCO4-206ENST00000596676 ITGB8P26012 769 aa17.28■□□□□ 0.36
SMCO4-206ENST00000596676 TXLNAP40222 546 aa17.28■□□□□ 0.36
SMCO4-206ENST00000596676 SLC12A3P55017 1021 aa17.28■□□□□ 0.36
SMCO4-206ENST00000596676 CACNB1Q02641 598 aaPredicted RBP17.28■□□□□ 0.36
SMCO4-206ENST00000596676 RAD51AP2Q09MP3 1159 aa17.28■□□□□ 0.36
SMCO4-206ENST00000596676 TBC1D8BQ0IIM8 1120 aa17.28■□□□□ 0.36
SMCO4-206ENST00000596676 TMEM62Q0P6H9 643 aa17.28■□□□□ 0.36
SMCO4-206ENST00000596676 E2F4Q16254 413 aa17.28■□□□□ 0.36
SMCO4-206ENST00000596676 ARSHQ5FYA8 562 aa17.28■□□□□ 0.36
SMCO4-206ENST00000596676 PADI6Q6TGC4 694 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms