RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 DNAJB3Q8WWF6 145 aa18.11■□□□□ 0.49
USHBP1-206ENST00000596436 PCYT2Q99447 389 aa18.11■□□□□ 0.49
USHBP1-206ENST00000596436 PLVAPQ9BX97 442 aa18.11■□□□□ 0.49
USHBP1-206ENST00000596436 GLT8D2Q9H1C3 349 aa18.11■□□□□ 0.49
USHBP1-206ENST00000596436 SMARCAD1Q9H4L7 1026 aa18.11■□□□□ 0.49
USHBP1-206ENST00000596436 AGO3Q9H9G7 860 aaKnown RBP18.11■□□□□ 0.49
USHBP1-206ENST00000596436 GJB4Q9NTQ9 266 aa18.11■□□□□ 0.49
USHBP1-206ENST00000596436 CLDND1Q9NY35 253 aa18.11■□□□□ 0.49
USHBP1-206ENST00000596436 CDY2AQ9Y6F7 541 aa18.11■□□□□ 0.49
USHBP1-206ENST00000596436 FOSP01100 380 aaPredicted RBP18.1■□□□□ 0.49
USHBP1-206ENST00000596436 MRPS6P82932 125 aaKnown RBP18.1■□□□□ 0.49
USHBP1-206ENST00000596436 DLX2Q07687 328 aaPredicted RBP18.1■□□□□ 0.49
USHBP1-206ENST00000596436 REXO1Q8N1G1 1221 aaKnown RBP18.1■□□□□ 0.49
USHBP1-206ENST00000596436 P2RX5Q93086 422 aa18.1■□□□□ 0.49
USHBP1-206ENST00000596436 JADE2Q9NQC1 790 aa18.1■□□□□ 0.49
USHBP1-206ENST00000596436 ORC3Q9UBD5 711 aaPredicted RBP18.1■□□□□ 0.49
USHBP1-206ENST00000596436 RRN3P2A6NIE6 340 aa18.09■□□□□ 0.49
USHBP1-206ENST00000596436 MARK3P27448 753 aa18.09■□□□□ 0.49
USHBP1-206ENST00000596436 GNA11P29992 359 aa18.09■□□□□ 0.49
USHBP1-206ENST00000596436 SREBF1P36956 1147 aa18.09■□□□□ 0.49
USHBP1-206ENST00000596436 NLRP5P59047 1200 aa18.09■□□□□ 0.49
USHBP1-206ENST00000596436 BTG3Q14201 252 aaPredicted RBP18.09■□□□□ 0.49
USHBP1-206ENST00000596436 RTN4RL1Q86UN2 441 aaPredicted RBP18.09■□□□□ 0.49
USHBP1-206ENST00000596436 ZSCAN31Q96LW9 406 aaPredicted RBP18.09■□□□□ 0.49
USHBP1-206ENST00000596436 KCNJ14Q9UNX9 436 aa18.09■□□□□ 0.49
USHBP1-206ENST00000596436 MBTPS2O43462 519 aa18.08■□□□□ 0.48
USHBP1-206ENST00000596436 TBX10O75333 385 aa18.08■□□□□ 0.48
USHBP1-206ENST00000596436 INSRRP14616 1297 aa18.08■□□□□ 0.48
USHBP1-206ENST00000596436 IRS1P35568 1242 aa18.08■□□□□ 0.48
USHBP1-206ENST00000596436 NAALADL2Q58DX5 795 aa18.08■□□□□ 0.48
USHBP1-206ENST00000596436 CMTR2Q8IYT2 770 aaKnown RBP18.08■□□□□ 0.48
USHBP1-206ENST00000596436 CRYGNQ8WXF5 182 aa18.08■□□□□ 0.48
USHBP1-206ENST00000596436 GLG1Q92896 1179 aa18.08■□□□□ 0.48
USHBP1-206ENST00000596436 PHF20Q9BVI0 1012 aa18.08■□□□□ 0.48
USHBP1-206ENST00000596436 FTHL17Q9BXU8 183 aa18.08■□□□□ 0.48
USHBP1-206ENST00000596436 PCDHA4Q9UN74 947 aa18.08■□□□□ 0.48
USHBP1-206ENST00000596436 PLAGL2Q9UPG8 496 aa18.08■□□□□ 0.48
USHBP1-206ENST00000596436 LOXHD1Q8IVV2 1947 aa18.08■□□□□ 0.48
USHBP1-206ENST00000596436 ZNF318Q5VUA4 2279 aa18.07■□□□□ 0.48
USHBP1-206ENST00000596436 NFASCO94856 1347 aa18.07■□□□□ 0.48
USHBP1-206ENST00000596436 IGSF9BQ9UPX0 1349 aa18.07■□□□□ 0.48
USHBP1-206ENST00000596436 KDM3AQ9Y4C1 1321 aa18.07■□□□□ 0.48
USHBP1-206ENST00000596436 M0R2N6 131 aa18.07■□□□□ 0.48
USHBP1-206ENST00000596436 ST18O60284 1047 aa18.07■□□□□ 0.48
USHBP1-206ENST00000596436 CD52P31358 61 aa18.07■□□□□ 0.48
USHBP1-206ENST00000596436 ADAM15Q13444 863 aa18.07■□□□□ 0.48
USHBP1-206ENST00000596436 IER5Q5VY09 327 aa18.07■□□□□ 0.48
USHBP1-206ENST00000596436 FAM43BQ6ZT52 329 aaPredicted RBP18.07■□□□□ 0.48
USHBP1-206ENST00000596436 NPAS4Q8IUM7 802 aa18.07■□□□□ 0.48
USHBP1-206ENST00000596436 DAGLBQ8NCG7 672 aa18.07■□□□□ 0.48
USHBP1-206ENST00000596436 CYP2W1Q8TAV3 490 aa18.07■□□□□ 0.48
USHBP1-206ENST00000596436 ZBTB10Q96DT7 871 aa18.07■□□□□ 0.48
USHBP1-206ENST00000596436 KCNH6Q9H252 994 aa18.07■□□□□ 0.48
USHBP1-206ENST00000596436 JPH1Q9HDC5 661 aaPredicted RBP18.07■□□□□ 0.48
USHBP1-206ENST00000596436 SH2B1Q9NRF2 756 aaPredicted RBP18.07■□□□□ 0.48
USHBP1-206ENST00000596436 KCNH7Q9NS40 1196 aa18.07■□□□□ 0.48
USHBP1-206ENST00000596436 PCDHA2Q9Y5H9 948 aa18.07■□□□□ 0.48
USHBP1-206ENST00000596436 MRPL42Q9Y6G3 142 aaKnown RBP18.07■□□□□ 0.48
USHBP1-206ENST00000596436 EDIL3O43854 480 aa18.06■□□□□ 0.48
USHBP1-206ENST00000596436 DNAJB1P25685 340 aa18.06■□□□□ 0.48
USHBP1-206ENST00000596436 GTF2F1P35269 517 aaKnown RBP eCLIP18.06■□□□□ 0.48
USHBP1-206ENST00000596436 SMAD4Q13485 552 aaKnown RBP18.06■□□□□ 0.48
USHBP1-206ENST00000596436 EP400NLQ6ZTU2 488 aa18.06■□□□□ 0.48
USHBP1-206ENST00000596436 PLPPR4Q7Z2D5 763 aa18.06■□□□□ 0.48
USHBP1-206ENST00000596436 BLIDQ8IZY5 108 aa18.06■□□□□ 0.48
USHBP1-206ENST00000596436 FAM177A1Q8N128 213 aaPredicted RBP18.06■□□□□ 0.48
USHBP1-206ENST00000596436 BICD2Q8TD16 824 aa18.06■□□□□ 0.48
USHBP1-206ENST00000596436 MSLNLQ96KJ4 702 aa18.06■□□□□ 0.48
USHBP1-206ENST00000596436 MXRA8Q9BRK3 442 aa18.06■□□□□ 0.48
USHBP1-206ENST00000596436 SLC9A2Q9UBY0 812 aa18.06■□□□□ 0.48
USHBP1-206ENST00000596436 TRPV2Q9Y5S1 764 aa18.06■□□□□ 0.48
USHBP1-206ENST00000596436 LINC01565O15544 149 aa18.05■□□□□ 0.48
USHBP1-206ENST00000596436 ATG7O95352 703 aa18.05■□□□□ 0.48
USHBP1-206ENST00000596436 EYA4O95677 639 aa18.05■□□□□ 0.48
USHBP1-206ENST00000596436 FOSBP53539 338 aa18.05■□□□□ 0.48
USHBP1-206ENST00000596436 PLCB4Q15147 1175 aa18.05■□□□□ 0.48
USHBP1-206ENST00000596436 HERC4Q5GLZ8 1057 aaPredicted RBP18.05■□□□□ 0.48
USHBP1-206ENST00000596436 MCTP2Q6DN12 878 aa18.05■□□□□ 0.48
USHBP1-206ENST00000596436 SPPL3Q8TCT6 385 aa18.05■□□□□ 0.48
USHBP1-206ENST00000596436 WASF1Q92558 559 aa18.05■□□□□ 0.48
USHBP1-206ENST00000596436 POP1Q99575 1024 aaKnown RBP18.05■□□□□ 0.48
USHBP1-206ENST00000596436 LLPHQ9BRT6 129 aaKnown RBP18.05■□□□□ 0.48
USHBP1-206ENST00000596436 ALG13Q9NP73 1137 aaKnown RBP18.05■□□□□ 0.48
USHBP1-206ENST00000596436 PKD2L1Q9P0L9 805 aa18.05■□□□□ 0.48
USHBP1-206ENST00000596436 PADI3Q9ULW8 664 aa18.05■□□□□ 0.48
USHBP1-206ENST00000596436 PLXNA4Q9HCM2 1894 aa18.05■□□□□ 0.48
USHBP1-206ENST00000596436 IGLV3-22A0A075B6J6 115 aa18.04■□□□□ 0.48
USHBP1-206ENST00000596436 IGKV6D-21A0A0A0MT36 114 aa18.04■□□□□ 0.48
USHBP1-206ENST00000596436 SMIM35A0A1B0GVV1 85 aa18.04■□□□□ 0.48
USHBP1-206ENST00000596436 FAM86B1E9PN63 330 aa18.04■□□□□ 0.48
USHBP1-206ENST00000596436 ITGB1P05556 798 aa18.04■□□□□ 0.48
USHBP1-206ENST00000596436 CYP3A4P08684 503 aa18.04■□□□□ 0.48
USHBP1-206ENST00000596436 FAM86B2P0C5J1 330 aa18.04■□□□□ 0.48
USHBP1-206ENST00000596436 ACTR2P61160 394 aa18.04■□□□□ 0.48
USHBP1-206ENST00000596436 IGBP1P78318 339 aa18.04■□□□□ 0.48
USHBP1-206ENST00000596436 ITGB3BPQ13352 177 aaPredicted RBP18.04■□□□□ 0.48
USHBP1-206ENST00000596436 CSPP1Q1MSJ5 1256 aa18.04■□□□□ 0.48
USHBP1-206ENST00000596436 OXER1Q8TDS5 423 aa18.04■□□□□ 0.48
USHBP1-206ENST00000596436 TNPO1Q92973 898 aaKnown RBP18.04■□□□□ 0.48
USHBP1-206ENST00000596436 TMX3Q96JJ7 454 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms