RNA–Protein interactions for RNA: ENST00000595519.5

TRPM4-205, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 1 (best)

Gene TRPM4, Length 3,702 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-205ENST00000595519 U2AF1L4Q8WU68 220 aaKnown RBP16.05■□□□□ 0.16
TRPM4-205ENST00000595519 CNOT10Q9H9A5 744 aaKnown RBP16.05■□□□□ 0.16
TRPM4-205ENST00000595519 KLHL33A6NCF5 533 aa16.05■□□□□ 0.16
TRPM4-205ENST00000595519 SPDYE5A6NIY4 337 aa16.05■□□□□ 0.16
TRPM4-205ENST00000595519 CCDC169A6NNP5 214 aa16.05■□□□□ 0.16
TRPM4-205ENST00000595519 PPIP5K2O43314 1243 aa16.05■□□□□ 0.16
TRPM4-205ENST00000595519 NSUN4Q96CB9 384 aaKnown RBP16.05■□□□□ 0.16
TRPM4-205ENST00000595519 NUDCD1Q96RS6 583 aa16.05■□□□□ 0.16
TRPM4-205ENST00000595519 RNF14Q9UBS8 474 aa16.05■□□□□ 0.16
TRPM4-205ENST00000595519 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.05■□□□□ 0.16
TRPM4-205ENST00000595519 UBR3Q6ZT12 1888 aa16.05■□□□□ 0.16
TRPM4-205ENST00000595519 A0A1W2PRG0 241 aa16.05■□□□□ 0.16
TRPM4-205ENST00000595519 CLSTN1O94985 981 aa16.05■□□□□ 0.16
TRPM4-205ENST00000595519 RPS6KA3P51812 740 aa16.05■□□□□ 0.16
TRPM4-205ENST00000595519 EAPPQ56P03 285 aaPredicted RBP16.05■□□□□ 0.16
TRPM4-205ENST00000595519 CNNM4Q6P4Q7 775 aa16.05■□□□□ 0.16
TRPM4-205ENST00000595519 NEK9Q8TD19 979 aa16.05■□□□□ 0.16
TRPM4-205ENST00000595519 EPS8L3Q8TE67 593 aaKnown RBP16.05■□□□□ 0.16
TRPM4-205ENST00000595519 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.05■□□□□ 0.162e-7■■■■■ 108.5
TRPM4-205ENST00000595519 SRP68Q9UHB9 627 aaKnown RBP16.05■□□□□ 0.16
TRPM4-205ENST00000595519 TOM1O60784 492 aa16.04■□□□□ 0.16
TRPM4-205ENST00000595519 SCG2P13521 617 aa16.04■□□□□ 0.16
TRPM4-205ENST00000595519 PRLRP16471 622 aa16.04■□□□□ 0.16
TRPM4-205ENST00000595519 RFC5P40937 340 aa16.04■□□□□ 0.16
TRPM4-205ENST00000595519 MAN2A1Q16706 1144 aa16.04■□□□□ 0.16
TRPM4-205ENST00000595519 ZC3H18Q86VM9 953 aaKnown RBP16.04■□□□□ 0.16
TRPM4-205ENST00000595519 CTNNBL1Q8WYA6 563 aaPredicted RBP16.04■□□□□ 0.16
TRPM4-205ENST00000595519 FAM129AQ9BZQ8 928 aa16.04■□□□□ 0.16
TRPM4-205ENST00000595519 NYXQ9GZU5 481 aa16.04■□□□□ 0.16
TRPM4-205ENST00000595519 C2CD2Q9Y426 696 aa16.04■□□□□ 0.16
TRPM4-205ENST00000595519 CFAP73A6NFT4 308 aa16.04■□□□□ 0.16
TRPM4-205ENST00000595519 ADAMTS3O15072 1205 aa16.04■□□□□ 0.16
TRPM4-205ENST00000595519 SETDB1Q15047 1291 aa16.04■□□□□ 0.16
TRPM4-205ENST00000595519 BLIDQ8IZY5 108 aa16.04■□□□□ 0.16
TRPM4-205ENST00000595519 ENAHQ8N8S7 591 aaPredicted RBP16.04■□□□□ 0.16
TRPM4-205ENST00000595519 TMEM237Q96Q45 408 aa16.04■□□□□ 0.16
TRPM4-205ENST00000595519 ZSCAN10Q96SZ4 725 aaPredicted RBP16.04■□□□□ 0.16
TRPM4-205ENST00000595519 PHF20Q9BVI0 1012 aa16.04■□□□□ 0.16
TRPM4-205ENST00000595519 METTL5Q9NRN9 209 aaKnown RBP16.04■□□□□ 0.16
TRPM4-205ENST00000595519 DAAM1Q9Y4D1 1078 aa16.04■□□□□ 0.16
TRPM4-205ENST00000595519 A0A1B0GVG6 124 aa16.04■□□□□ 0.16
TRPM4-205ENST00000595519 LONP1P36776 959 aaKnown RBP16.04■□□□□ 0.16
TRPM4-205ENST00000595519 RPS8P62241 208 aaKnown RBP16.04■□□□□ 0.16
TRPM4-205ENST00000595519 DYNLL1P63167 89 aaKnown RBP16.04■□□□□ 0.16
TRPM4-205ENST00000595519 CAVIN4Q5BKX8 364 aa16.04■□□□□ 0.16
TRPM4-205ENST00000595519 RNF220Q5VTB9 566 aa16.04■□□□□ 0.16
TRPM4-205ENST00000595519 SV2BQ7L1I2 683 aa16.04■□□□□ 0.16
TRPM4-205ENST00000595519 DTX3LQ8TDB6 740 aa16.04■□□□□ 0.16
TRPM4-205ENST00000595519 SMNDC1O75940 238 aaKnown RBP eCLIP16.03■□□□□ 0.162e-8■□□□□ 9.9
TRPM4-205ENST00000595519 GOLGA8HP0CJ92 632 aa16.03■□□□□ 0.16
TRPM4-205ENST00000595519 PDE6CP51160 858 aa16.03■□□□□ 0.16
TRPM4-205ENST00000595519 TXNRD1Q16881 649 aa16.03■□□□□ 0.16
TRPM4-205ENST00000595519 ZNF513Q8N8E2 541 aaPredicted RBP16.03■□□□□ 0.16
TRPM4-205ENST00000595519 GBP5Q96PP8 586 aa16.03■□□□□ 0.16
TRPM4-205ENST00000595519 RPS6KC1Q96S38 1066 aa16.03■□□□□ 0.16
TRPM4-205ENST00000595519 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.03■□□□□ 0.16
TRPM4-205ENST00000595519 RASGRF2O14827 1237 aa16.03■□□□□ 0.16
TRPM4-205ENST00000595519 TNIP1Q15025 636 aa16.03■□□□□ 0.16
TRPM4-205ENST00000595519 CAPN12Q6ZSI9 719 aa16.03■□□□□ 0.16
TRPM4-205ENST00000595519 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.03■□□□□ 0.16
TRPM4-205ENST00000595519 MAB21L3Q8N8X9 362 aa16.03■□□□□ 0.16
TRPM4-205ENST00000595519 VCXQ9H320 206 aa16.03■□□□□ 0.16
TRPM4-205ENST00000595519 SH3BP1Q9Y3L3 701 aa16.03■□□□□ 0.16
TRPM4-205ENST00000595519 PKN1Q16512 942 aa16.03■□□□□ 0.16
TRPM4-205ENST00000595519 LRIG3Q6UXM1 1119 aa16.03■□□□□ 0.16
TRPM4-205ENST00000595519 METTL13Q8N6R0 699 aa16.03■□□□□ 0.16
TRPM4-205ENST00000595519 CCDC160A6NGH7 325 aa16.02■□□□□ 0.16
TRPM4-205ENST00000595519 PCP11498 1178 aaKnown RBP16.02■□□□□ 0.16
TRPM4-205ENST00000595519 ACTN1P12814 892 aa16.02■□□□□ 0.16
TRPM4-205ENST00000595519 BYSLQ13895 437 aaKnown RBP16.02■□□□□ 0.16
TRPM4-205ENST00000595519 LONRF1Q17RB8 773 aa16.02■□□□□ 0.16
TRPM4-205ENST00000595519 PDXDC1Q6P996 788 aa16.02■□□□□ 0.16
TRPM4-205ENST00000595519 SEPT14Q6ZU15 432 aa16.02■□□□□ 0.16
TRPM4-205ENST00000595519 GIMAP8Q8ND71 665 aaPredicted RBP16.02■□□□□ 0.16
TRPM4-205ENST00000595519 P3H4Q92791 437 aa16.02■□□□□ 0.16
TRPM4-205ENST00000595519 DDX60LQ5H9U9 1706 aaKnown RBP16.02■□□□□ 0.16
TRPM4-205ENST00000595519 PMS2P54278 862 aa16.02■□□□□ 0.15
TRPM4-205ENST00000595519 COPS2P61201 443 aa16.02■□□□□ 0.15
TRPM4-205ENST00000595519 PPP2R5BQ15173 497 aa16.02■□□□□ 0.15
TRPM4-205ENST00000595519 SYCP3Q8IZU3 236 aa16.02■□□□□ 0.15
TRPM4-205ENST00000595519 ANKS1AQ92625 1134 aa16.02■□□□□ 0.15
TRPM4-205ENST00000595519 TMEM165Q9HC07 324 aa16.02■□□□□ 0.15
TRPM4-205ENST00000595519 USP15Q9Y4E8 981 aaPredicted RBP16.02■□□□□ 0.15
TRPM4-205ENST00000595519 F8VZ95 297 aa16.02■□□□□ 0.15
TRPM4-205ENST00000595519 ITIH3Q06033 890 aa16.02■□□□□ 0.15
TRPM4-205ENST00000595519 IFI16Q16666 785 aaKnown RBP16.02■□□□□ 0.15
TRPM4-205ENST00000595519 ERMARDQ5T6L9 678 aa16.02■□□□□ 0.15
TRPM4-205ENST00000595519 BICDL1Q6ZP65 573 aa16.02■□□□□ 0.15
TRPM4-205ENST00000595519 VPS36Q86VN1 386 aa16.02■□□□□ 0.15
TRPM4-205ENST00000595519 CD302Q8IX05 232 aa16.02■□□□□ 0.15
TRPM4-205ENST00000595519 SRBD1Q8N5C6 995 aaKnown RBP16.02■□□□□ 0.15
TRPM4-205ENST00000595519 PURBQ96QR8 312 aaKnown RBP16.02■□□□□ 0.15
TRPM4-205ENST00000595519 HOMER3Q9NSC5 361 aa16.02■□□□□ 0.15
TRPM4-205ENST00000595519 SERPINA10Q9UK55 444 aa16.02■□□□□ 0.15
TRPM4-205ENST00000595519 GRID2IPA4D2P6 1211 aa16.01■□□□□ 0.15
TRPM4-205ENST00000595519 TARSP26639 723 aaKnown RBP16.01■□□□□ 0.15
TRPM4-205ENST00000595519 SPIRE2Q8WWL2 714 aa16.01■□□□□ 0.15
TRPM4-205ENST00000595519 C8orf37Q96NL8 207 aa16.01■□□□□ 0.15
TRPM4-205ENST00000595519 MTRF1LQ9UGC7 380 aaKnown RBP16.01■□□□□ 0.15
TRPM4-205ENST00000595519 USP17L12C9JPN9 530 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms