RNA–Protein interactions for RNA: ENST00000595055.1

PPP5C-215, Transcript of protein phosphatase 5 catalytic subunit, human

TSL 2

Gene PPP5C, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP5C-215	ENST00000595055	UPF3B	Q9BZI7	483 aa	Known RBP	27.6	■■■□□ 2.01
PPP5C-215	ENST00000595055	TMX1	Q9H3N1	280 aa		27.6	■■■□□ 2.01
PPP5C-215	ENST00000595055	GABBR1	Q9UBS5	961 aa		27.6	■■■□□ 2.01
PPP5C-215	ENST00000595055	CPLX1	O14810	134 aa		27.59	■■■□□ 2.01
PPP5C-215	ENST00000595055	C22orf31	O95567	290 aa		27.59	■■■□□ 2.01
PPP5C-215	ENST00000595055	SSRP1	Q08945	709 aa	Known RBP	27.59	■■■□□ 2.01
PPP5C-215	ENST00000595055	NFX1	Q12986	1120 aa	Known RBP	27.59	■■■□□ 2.01
PPP5C-215	ENST00000595055	TCEAL5	Q5H9L2	206 aa		27.59	■■■□□ 2.01
PPP5C-215	ENST00000595055	LARP6	Q9BRS8	491 aa	Known RBP	27.59	■■■□□ 2.01
PPP5C-215	ENST00000595055	TM6SF1	Q9BZW5	370 aa		27.59	■■■□□ 2.01
PPP5C-215	ENST00000595055	NSUN3	Q9H649	340 aa	Known RBP	27.59	■■■□□ 2.01
PPP5C-215	ENST00000595055	CDHR5	Q9HBB8	845 aa		27.59	■■■□□ 2.01
PPP5C-215	ENST00000595055	NCOR1	O75376	2440 aa		27.58	■■■□□ 2.01
PPP5C-215	ENST00000595055	WDR64	B1ANS9	1081 aa		27.58	■■■□□ 2.01
PPP5C-215	ENST00000595055	EDIL3	O43854	480 aa		27.58	■■■□□ 2.01
PPP5C-215	ENST00000595055	RPS6KA5	O75582	802 aa		27.58	■■■□□ 2.01
PPP5C-215	ENST00000595055	NEFL	P07196	543 aa		27.58	■■■□□ 2.01
PPP5C-215	ENST00000595055	STAG3L1	P0CL83	205 aa		27.58	■■■□□ 2.01
PPP5C-215	ENST00000595055	USP11	P51784	963 aa		27.58	■■■□□ 2.01
PPP5C-215	ENST00000595055	LEXM	Q3ZCV2	418 aa		27.58	■■■□□ 2.01
PPP5C-215	ENST00000595055	TMEM40	Q8WWA1	233 aa		27.58	■■■□□ 2.01
PPP5C-215	ENST00000595055	ZNF274	Q96GC6	653 aa	Predicted RBP	27.58	■■■□□ 2.01
PPP5C-215	ENST00000595055	NOC2L	Q9Y3T9	749 aa	Known RBP	27.58	■■■□□ 2.01
PPP5C-215	ENST00000595055	RALGAPA2	Q2PPJ7	1873 aa		27.57	■■■□□ 2
PPP5C-215	ENST00000595055	TTC3	P53804	2025 aa		27.57	■■■□□ 2
PPP5C-215	ENST00000595055	GRM6	O15303	877 aa		27.57	■■■□□ 2
PPP5C-215	ENST00000595055	MSH4	O15457	936 aa		27.57	■■■□□ 2
PPP5C-215	ENST00000595055	CMTR2	Q8IYT2	770 aa	Known RBP	27.57	■■■□□ 2
PPP5C-215	ENST00000595055	METTL13	Q8N6R0	699 aa		27.57	■■■□□ 2
PPP5C-215	ENST00000595055	PPP1R16B	Q96T49	567 aa		27.57	■■■□□ 2
PPP5C-215	ENST00000595055	ERVK-5	Q9HDB9	667 aa		27.57	■■■□□ 2
PPP5C-215	ENST00000595055	PCDHA4	Q9UN74	947 aa		27.57	■■■□□ 2
PPP5C-215	ENST00000595055	CEP131	Q9UPN4	1083 aa		27.57	■■■□□ 2
PPP5C-215	ENST00000595055	MRPL42	Q9Y6G3	142 aa	Known RBP	27.57	■■■□□ 2
PPP5C-215	ENST00000595055	NLRC5	Q86WI3	1866 aa		27.57	■■■□□ 2
PPP5C-215	ENST00000595055	DEXI	O95424	95 aa		27.56	■■■□□ 2
PPP5C-215	ENST00000595055	STK3	Q13188	491 aa		27.56	■■■□□ 2
PPP5C-215	ENST00000595055	KIZ	Q2M2Z5	673 aa		27.56	■■■□□ 2
PPP5C-215	ENST00000595055	PAN2	Q504Q3	1202 aa	Known RBP	27.56	■■■□□ 2
PPP5C-215	ENST00000595055	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	27.56	■■■□□ 2
PPP5C-215	ENST00000595055	TBCK	Q8TEA7	893 aa		27.56	■■■□□ 2
PPP5C-215	ENST00000595055	FAM167A	Q96KS9	214 aa		27.56	■■■□□ 2
PPP5C-215	ENST00000595055	RIT2	Q99578	217 aa		27.56	■■■□□ 2
PPP5C-215	ENST00000595055	LMAN2L	Q9H0V9	348 aa		27.56	■■■□□ 2
PPP5C-215	ENST00000595055	DISC1	Q9NRI5	854 aa		27.56	■■■□□ 2
PPP5C-215	ENST00000595055	LRFN2	Q9ULH4	789 aa		27.56	■■■□□ 2
PPP5C-215	ENST00000595055	GAS7	O60861	476 aa		27.55	■■■□□ 2
PPP5C-215	ENST00000595055	IBSP	P21815	317 aa	Predicted RBP	27.55	■■■□□ 2
PPP5C-215	ENST00000595055	CPLX2	Q6PUV4	134 aa	Known RBP	27.55	■■■□□ 2
PPP5C-215	ENST00000595055	SLC5A5	Q92911	643 aa		27.55	■■■□□ 2
PPP5C-215	ENST00000595055	PABPC5	Q96DU9	382 aa	Known RBP	27.55	■■■□□ 2
PPP5C-215	ENST00000595055	PLVAP	Q9BX97	442 aa		27.55	■■■□□ 2
PPP5C-215	ENST00000595055	C22orf23	Q9BZE7	217 aa		27.55	■■■□□ 2
PPP5C-215	ENST00000595055	PDRG1	Q9NUG6	133 aa		27.55	■■■□□ 2
PPP5C-215	ENST00000595055	ST3GAL5	Q9UNP4	418 aa		27.55	■■■□□ 2
PPP5C-215	ENST00000595055	BRWD1	Q9NSI6	2320 aa		27.55	■■■□□ 2
PPP5C-215	ENST00000595055	CHMP2A	O43633	222 aa		27.54	■■■□□ 2
PPP5C-215	ENST00000595055	MGEA5	O60502	916 aa		27.54	■■■□□ 2
PPP5C-215	ENST00000595055	VTN	P04004	478 aa		27.54	■■■□□ 2
PPP5C-215	ENST00000595055	SARS	P49591	514 aa	Known RBP	27.54	■■■□□ 2
PPP5C-215	ENST00000595055	GATM	P50440	423 aa		27.54	■■■□□ 2
PPP5C-215	ENST00000595055	CRYBB1	P53674	252 aa	Predicted RBP	27.54	■■■□□ 2
PPP5C-215	ENST00000595055	ODR4	Q5SWX8	454 aa		27.54	■■■□□ 2
PPP5C-215	ENST00000595055	LRCH2	Q5VUJ6	765 aa		27.54	■■■□□ 2
PPP5C-215	ENST00000595055	FAM43B	Q6ZT52	329 aa	Predicted RBP	27.54	■■■□□ 2
PPP5C-215	ENST00000595055	EP400NL	Q6ZTU2	488 aa		27.54	■■■□□ 2
PPP5C-215	ENST00000595055	OSMR	Q99650	979 aa		27.54	■■■□□ 2
PPP5C-215	ENST00000595055	DENND3	A2RUS2	1198 aa		27.53	■■■□□ 2
PPP5C-215	ENST00000595055		H3BQ06	376 aa	Predicted RBP	27.53	■■■□□ 2
PPP5C-215	ENST00000595055	GPR182	O15218	404 aa		27.53	■■■□□ 2
PPP5C-215	ENST00000595055	MAGEB2	O15479	319 aa		27.53	■■■□□ 2
PPP5C-215	ENST00000595055	CSPG5	O95196	566 aa		27.53	■■■□□ 2
PPP5C-215	ENST00000595055	COL19A1	Q14993	1142 aa		27.53	■■■□□ 2
PPP5C-215	ENST00000595055	PTCRA	Q6ISU1	281 aa	Predicted RBP	27.53	■■■□□ 2
PPP5C-215	ENST00000595055	BLID	Q8IZY5	108 aa		27.53	■■■□□ 2
PPP5C-215	ENST00000595055	NEK9	Q8TD19	979 aa		27.53	■■■□□ 2
PPP5C-215	ENST00000595055	GJA10	Q969M2	543 aa		27.53	■■■□□ 2
PPP5C-215	ENST00000595055	AIFM3	Q96NN9	605 aa		27.53	■■■□□ 2
PPP5C-215	ENST00000595055	ADAM2	Q99965	735 aa		27.53	■■■□□ 2
PPP5C-215	ENST00000595055	TEKT3	Q9BXF9	490 aa		27.53	■■■□□ 2
PPP5C-215	ENST00000595055	ALG13	Q9NP73	1137 aa	Known RBP	27.53	■■■□□ 2
PPP5C-215	ENST00000595055	PCDHB7	Q9Y5E2	793 aa		27.53	■■■□□ 2
PPP5C-215	ENST00000595055	ZNF862	O60290	1169 aa		27.52	■■■□□ 2
PPP5C-215	ENST00000595055	GPR32	O75388	356 aa		27.52	■■■□□ 2
PPP5C-215	ENST00000595055	MMP1	P03956	469 aa		27.52	■■■□□ 2
PPP5C-215	ENST00000595055	OAT	P04181	439 aa		27.52	■■■□□ 2
PPP5C-215	ENST00000595055	SFN	P31947	248 aa		27.52	■■■□□ 2
PPP5C-215	ENST00000595055	CLCN3	P51790	818 aa		27.52	■■■□□ 2
PPP5C-215	ENST00000595055	JAK3	P52333	1124 aa		27.52	■■■□□ 2
PPP5C-215	ENST00000595055	PRKCE	Q02156	737 aa		27.52	■■■□□ 2
PPP5C-215	ENST00000595055	FAM228A	Q86W67	206 aa		27.52	■■■□□ 2
PPP5C-215	ENST00000595055	UNC45A	Q9H3U1	944 aa		27.52	■■■□□ 2
PPP5C-215	ENST00000595055	RGS18	Q9NS28	235 aa		27.52	■■■□□ 2
PPP5C-215	ENST00000595055	C1orf112	Q9NSG2	853 aa		27.52	■■■□□ 2
PPP5C-215	ENST00000595055	PLAGL2	Q9UPG8	496 aa		27.52	■■■□□ 2
PPP5C-215	ENST00000595055	TDP2	O95551	362 aa		27.51	■■□□□ 1.99
PPP5C-215	ENST00000595055	IL9	P15248	144 aa		27.51	■■□□□ 1.99
PPP5C-215	ENST00000595055	COL9A1	P20849	921 aa		27.51	■■□□□ 1.99
PPP5C-215	ENST00000595055	UGCG	Q16739	394 aa		27.51	■■□□□ 1.99
PPP5C-215	ENST00000595055		Q4G0T1	1027 aa		27.51	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms