RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 TMEM259Q4ZIN3 620 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 WASHC2DQ5SRD0 308 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 PI16Q6UXB8 463 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 CEP128Q6ZU80 1094 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 ENDOVQ8N8Q3 282 aaKnown RBP4.76□□□□□ -1.65
LRIT3-202ENST00000594814 TRPC4APQ8TEL6 797 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 IFT81Q8WYA0 676 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 RILPL2Q969X0 211 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 HVCN1Q96D96 273 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 CAMKK2Q96RR4 588 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 KCNMB3Q9NPA1 279 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 GDF3Q9NR23 364 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 SCHIP1Q9P0W5 487 aaPredicted RBP4.76□□□□□ -1.65
LRIT3-202ENST00000594814 TNRC6CQ9HCJ0 1690 aaKnown RBP4.76□□□□□ -1.65
LRIT3-202ENST00000594814 NEDD4P46934 1319 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 PI4K2BG5E9Z4 385 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 ZNF202O95125 648 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 MYL1P05976 194 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 LINGO3P0C6S8 592 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 GYS1P13807 737 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 ADORA1P30542 326 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 CYLC1P35663 651 aaPredicted RBP4.76□□□□□ -1.65
LRIT3-202ENST00000594814 CD86P42081 329 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 ME1P48163 572 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 CTCFP49711 727 aaPredicted RBP4.76□□□□□ -1.65
LRIT3-202ENST00000594814 GNAQP50148 359 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 COPAP53621 1224 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 TUBA4AP68366 448 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 MXRA7P84157 204 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 PFKPQ01813 784 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 SCARF1Q14162 830 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 MAP7Q14244 749 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 Q3C1V9 767 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 DPCR1Q3MIW9 517 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 ANO1Q5XXA6 986 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 NSUN7Q8NE18 718 aaKnown RBP4.76□□□□□ -1.65
LRIT3-202ENST00000594814 ACRBPQ8NEB7 543 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 NKX2-3Q8TAU0 364 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 TEKT4Q8WW24 435 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 TBC1D5Q92609 795 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 GRAMD1AQ96CP6 724 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 NAF1Q96HR8 494 aaKnown RBP4.76□□□□□ -1.65
LRIT3-202ENST00000594814 SCLT1Q96NL6 688 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 RAB17Q9H0T7 212 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 CENPHQ9H3R5 247 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 TMBIM4Q9HC24 238 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 STIM2Q9P246 746 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.76□□□□□ -1.65
LRIT3-202ENST00000594814 SNCAIPQ9Y6H5 919 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 A0A0G2JLW4 131 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 CNOT4O95628 575 aaKnown RBP4.76□□□□□ -1.65
LRIT3-202ENST00000594814 BMP15O95972 392 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 CSF1RP07333 972 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 GNAT1P11488 350 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 PIK3CAP42336 1068 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 SEPT6Q14141 434 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 FIGNQ5HY92 759 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 SPATA1Q5VX52 437 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 CCDC102BQ68D86 513 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 ZNF772Q68DY9 489 aaPredicted RBP4.76□□□□□ -1.65
LRIT3-202ENST00000594814 KLC3Q6P597 504 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 TOGARAM2Q6ZUX3 1019 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 MYLK4Q86YV6 388 aaPredicted RBP4.76□□□□□ -1.65
LRIT3-202ENST00000594814 LRRC49Q8IUZ0 686 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 CROCCP3Q8IVE0 287 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.76□□□□□ -1.65
LRIT3-202ENST00000594814 BRF1Q92994 677 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 STAMBPL1Q96FJ0 436 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 SEC16BQ96JE7 1060 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 NLRP3Q96P20 1036 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 OSBPL1AQ9BXW6 950 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 MAK16Q9BXY0 300 aaKnown RBP4.76□□□□□ -1.65
LRIT3-202ENST00000594814 RIC8AQ9NPQ8 531 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 FAM114A2Q9NRY5 505 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 ATP8A2Q9NTI2 1148 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 LUZP4Q9P127 313 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 SCOCQ9UIL1 159 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 MRPS23Q9Y3D9 190 aaKnown RBP4.76□□□□□ -1.65
LRIT3-202ENST00000594814 CHD4Q14839 1912 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 UBR3Q6ZT12 1888 aa4.76□□□□□ -1.65
LRIT3-202ENST00000594814 GTPBP10A4D1E9 387 aaKnown RBP4.75□□□□□ -1.65
LRIT3-202ENST00000594814 TAF5LO75529 589 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 SKAP2O75563 359 aaPredicted RBP4.75□□□□□ -1.65
LRIT3-202ENST00000594814 OATP04181 439 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 USP11P51784 963 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 NFIXQ14938 502 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 SLC39A14Q15043 492 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 STK38Q15208 465 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 Q4G0T1 1027 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 KIAA0319Q5VV43 1072 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 TMEM110Q86TL2 294 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 HOOK3Q86VS8 718 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 SLC35F6Q8N357 371 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 NKAPQ8N5F7 415 aaKnown RBP4.75□□□□□ -1.65
LRIT3-202ENST00000594814 RNF10Q8N5U6 811 aaKnown RBP4.75□□□□□ -1.65
LRIT3-202ENST00000594814 ZBTB8BQ8NAP8 495 aaPredicted RBP4.75□□□□□ -1.65
LRIT3-202ENST00000594814 RHPN1Q8TCX5 695 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 ATP8B4Q8TF62 1192 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 AZIN2Q96A70 460 aa4.75□□□□□ -1.65
LRIT3-202ENST00000594814 VWCEQ96DN2 955 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms