RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 TMEM63BQ5T3F8 832 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 TAPT1Q6NXT6 567 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 GLIS3Q8NEA6 775 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 NELFBQ8WX92 580 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 PRIMPOLQ96LW4 560 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 C16orf45Q96MC5 204 aaPredicted RBP14.65□□□□□ -0.06
VRK3-205ENST00000593919 SH2D3AQ9BRG2 576 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 TINF2Q9BSI4 451 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 KATNBL1Q9H079 304 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 ZHX3Q9H4I2 956 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 MLXIPQ9HAP2 919 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 POLD4Q9HCU8 107 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 SLC5A4Q9NY91 659 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 KCND2Q9NZV8 630 aa14.65□□□□□ -0.06
VRK3-205ENST00000593919 BACH1O14867 736 aa14.64□□□□□ -0.07
VRK3-205ENST00000593919 TXNP10599 105 aaKnown RBP14.64□□□□□ -0.07
VRK3-205ENST00000593919 PRKCEQ02156 737 aa14.64□□□□□ -0.07
VRK3-205ENST00000593919 COBLL1Q53SF7 1204 aa14.64□□□□□ -0.07
VRK3-205ENST00000593919 HERC4Q5GLZ8 1057 aaPredicted RBP14.64□□□□□ -0.07
VRK3-205ENST00000593919 CELF3Q5SZQ8 465 aaKnown RBP14.64□□□□□ -0.07
VRK3-205ENST00000593919 PLA2G4FQ68DD2 849 aa14.64□□□□□ -0.07
VRK3-205ENST00000593919 ANO5Q75V66 913 aa14.64□□□□□ -0.07
VRK3-205ENST00000593919 COPS5Q92905 334 aa14.64□□□□□ -0.07
VRK3-205ENST00000593919 TBC1D7Q9P0N9 293 aa14.64□□□□□ -0.07
VRK3-205ENST00000593919 RWDD2AQ9UIY3 292 aa14.64□□□□□ -0.07
VRK3-205ENST00000593919 PCDHA2Q9Y5H9 948 aa14.64□□□□□ -0.07
VRK3-205ENST00000593919 GSTTP1A0A1W2PQM5 241 aa14.64□□□□□ -0.07
VRK3-205ENST00000593919 TRIM49BA6NDI0 452 aa14.64□□□□□ -0.07
VRK3-205ENST00000593919 PSMA7O14818 248 aa14.64□□□□□ -0.07
VRK3-205ENST00000593919 CBFA2T2O43439 604 aa14.64□□□□□ -0.07
VRK3-205ENST00000593919 DKC1O60832 514 aaKnown RBP eCLIP14.64□□□□□ -0.07
VRK3-205ENST00000593919 TBCAO75347 108 aaKnown RBP14.64□□□□□ -0.07
VRK3-205ENST00000593919 CTGFP29279 349 aa14.64□□□□□ -0.07
VRK3-205ENST00000593919 TPD52L1Q16890 204 aaPredicted RBP14.64□□□□□ -0.07
VRK3-205ENST00000593919 HSDL1Q3SXM5 330 aa14.64□□□□□ -0.07
VRK3-205ENST00000593919 PADI6Q6TGC4 694 aa14.64□□□□□ -0.07
VRK3-205ENST00000593919 MYRIPQ8NFW9 859 aa14.64□□□□□ -0.07
VRK3-205ENST00000593919 CCDC43Q96MW1 224 aaKnown RBP14.64□□□□□ -0.07
VRK3-205ENST00000593919 FGFBP2Q9BYJ0 223 aa14.64□□□□□ -0.07
VRK3-205ENST00000593919 IGKV6D-21A0A0A0MT36 114 aa14.63□□□□□ -0.07
VRK3-205ENST00000593919 TNPO2O14787 897 aaKnown RBP14.63□□□□□ -0.07
VRK3-205ENST00000593919 STBD1O95210 358 aa14.63□□□□□ -0.07
VRK3-205ENST00000593919 HOXC6P09630 235 aa14.63□□□□□ -0.07
VRK3-205ENST00000593919 TCF7P36402 384 aaPredicted RBP14.63□□□□□ -0.07
VRK3-205ENST00000593919 PMS1P54277 932 aaKnown RBP14.63□□□□□ -0.07
VRK3-205ENST00000593919 NPEPPSP55786 919 aa14.63□□□□□ -0.07
VRK3-205ENST00000593919 SPATA1Q5VX52 437 aa14.63□□□□□ -0.07
VRK3-205ENST00000593919 SFR1Q86XK3 245 aa14.63□□□□□ -0.07
VRK3-205ENST00000593919 DHX37Q8IY37 1157 aaKnown RBP14.63□□□□□ -0.07
VRK3-205ENST00000593919 CCDC150Q8NCX0 1101 aa14.63□□□□□ -0.07
VRK3-205ENST00000593919 USP6NLQ92738 828 aa14.63□□□□□ -0.07
VRK3-205ENST00000593919 ZNF302Q9NR11 478 aa14.63□□□□□ -0.07
VRK3-205ENST00000593919 SAMSN1Q9NSI8 373 aaKnown RBP14.63□□□□□ -0.07
VRK3-205ENST00000593919 ANKEF1Q9NU02 776 aa14.63□□□□□ -0.07
VRK3-205ENST00000593919 MAFBQ9Y5Q3 323 aaPredicted RBP14.63□□□□□ -0.07
VRK3-205ENST00000593919 RBM47A0AV96 593 aaKnown RBP14.62□□□□□ -0.07
VRK3-205ENST00000593919 SFI1A8K8P3 1242 aa14.62□□□□□ -0.07
VRK3-205ENST00000593919 NOP56O00567 594 aaKnown RBP14.62□□□□□ -0.07
VRK3-205ENST00000593919 USO1O60763 962 aaKnown RBP14.62□□□□□ -0.07
VRK3-205ENST00000593919 GUCY2CP25092 1073 aa14.62□□□□□ -0.07
VRK3-205ENST00000593919 PPP1R2P41236 205 aa14.62□□□□□ -0.07
VRK3-205ENST00000593919 LRRC41Q15345 812 aa14.62□□□□□ -0.07
VRK3-205ENST00000593919 XKR9Q5GH70 373 aa14.62□□□□□ -0.07
VRK3-205ENST00000593919 GJC2Q5T442 439 aaPredicted RBP14.62□□□□□ -0.07
VRK3-205ENST00000593919 ARMCX5Q6P1M9 558 aa14.62□□□□□ -0.07
VRK3-205ENST00000593919 GUF1Q8N442 669 aaKnown RBP14.62□□□□□ -0.07
VRK3-205ENST00000593919 MSL3Q8N5Y2 521 aaKnown RBP14.62□□□□□ -0.07
VRK3-205ENST00000593919 SOCS4Q8WXH5 440 aa14.62□□□□□ -0.07
VRK3-205ENST00000593919 SEPT1Q8WYJ6 367 aa14.62□□□□□ -0.07
VRK3-205ENST00000593919 DHTKD1Q96HY7 919 aaPredicted RBP14.62□□□□□ -0.07
VRK3-205ENST00000593919 PCYT2Q99447 389 aa14.62□□□□□ -0.07
VRK3-205ENST00000593919 GPR20Q99678 358 aa14.62□□□□□ -0.07
VRK3-205ENST00000593919 ABHD16BQ9H3Z7 469 aa14.62□□□□□ -0.07
VRK3-205ENST00000593919 FLRT1Q9NZU1 646 aa14.62□□□□□ -0.07
VRK3-205ENST00000593919 ODF2LQ9ULJ1 636 aa14.62□□□□□ -0.07
VRK3-205ENST00000593919 COL4A3BPQ9Y5P4 624 aa14.62□□□□□ -0.07
VRK3-205ENST00000593919 FAM13AO94988 1023 aa14.62□□□□□ -0.07
VRK3-205ENST00000593919 ZNF18P17022 549 aa14.62□□□□□ -0.07
VRK3-205ENST00000593919 ATP4AP20648 1035 aa14.62□□□□□ -0.07
VRK3-205ENST00000593919 ADCYAP1R1P41586 468 aa14.62□□□□□ -0.07
VRK3-205ENST00000593919 PTPN21Q16825 1174 aa14.62□□□□□ -0.07
VRK3-205ENST00000593919 SPATA33Q96N06 139 aa14.62□□□□□ -0.07
VRK3-205ENST00000593919 SEPT9Q9UHD8 586 aaPredicted RBP14.62□□□□□ -0.07
VRK3-205ENST00000593919 GJD2Q9UKL4 321 aa14.62□□□□□ -0.07
VRK3-205ENST00000593919 CEP350Q5VT06 3117 aa14.61□□□□□ -0.07
VRK3-205ENST00000593919 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.61□□□□□ -0.07
VRK3-205ENST00000593919 USP27XA6NNY8 438 aa14.61□□□□□ -0.07
VRK3-205ENST00000593919 HIP1RO75146 1068 aa14.61□□□□□ -0.07
VRK3-205ENST00000593919 TNNT1P13805 278 aa14.61□□□□□ -0.07
VRK3-205ENST00000593919 CYP2B6P20813 491 aa14.61□□□□□ -0.07
VRK3-205ENST00000593919 SFPQP23246 707 aaKnown RBP eCLIP14.61□□□□□ -0.07
VRK3-205ENST00000593919 CCNE1P24864 410 aa14.61□□□□□ -0.07
VRK3-205ENST00000593919 RGS2P41220 211 aa14.61□□□□□ -0.07
VRK3-205ENST00000593919 ZNF131P52739 623 aa14.61□□□□□ -0.07
VRK3-205ENST00000593919 MAPK7Q13164 816 aa14.61□□□□□ -0.07
VRK3-205ENST00000593919 ACVR2BQ13705 512 aa14.61□□□□□ -0.07
VRK3-205ENST00000593919 CCL14Q16627 93 aa14.61□□□□□ -0.07
VRK3-205ENST00000593919 TTI2Q6NXR4 508 aa14.61□□□□□ -0.07
VRK3-205ENST00000593919 MAEAQ7L5Y9 396 aa14.61□□□□□ -0.07
VRK3-205ENST00000593919 OTUD6AQ7L8S5 288 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms