RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 KLHL23Q8NBE8 558 aa12.15□□□□□ -0.46
USE1-203ENST00000593597 ATP8B4Q8TF62 1192 aa12.15□□□□□ -0.46
USE1-203ENST00000593597 P2RX5Q93086 422 aa12.15□□□□□ -0.46
USE1-203ENST00000593597 LENG9Q96B70 501 aa12.15□□□□□ -0.46
USE1-203ENST00000593597 MSLNLQ96KJ4 702 aa12.15□□□□□ -0.46
USE1-203ENST00000593597 PPP1R16BQ96T49 567 aa12.15□□□□□ -0.46
USE1-203ENST00000593597 PLVAPQ9BX97 442 aa12.15□□□□□ -0.46
USE1-203ENST00000593597 CLEC1BQ9P126 229 aa12.15□□□□□ -0.46
USE1-203ENST00000593597 RWDD3Q9Y3V2 267 aa12.15□□□□□ -0.46
USE1-203ENST00000593597 ARIH1Q9Y4X5 557 aaPredicted RBP12.15□□□□□ -0.46
USE1-203ENST00000593597 PRR33A8MZF0 331 aa12.14□□□□□ -0.47
USE1-203ENST00000593597 C9IYK1 514 aa12.14□□□□□ -0.47
USE1-203ENST00000593597 PPFIA3O75145 1194 aa12.14□□□□□ -0.47
USE1-203ENST00000593597 CYP3A4P08684 503 aa12.14□□□□□ -0.47
USE1-203ENST00000593597 RBM10P98175 930 aaKnown RBP12.14□□□□□ -0.47
USE1-203ENST00000593597 FAM228AQ86W67 206 aa12.14□□□□□ -0.47
USE1-203ENST00000593597 PLA2G4DQ86XP0 818 aa12.14□□□□□ -0.47
USE1-203ENST00000593597 ADHFE1Q8IWW8 467 aa12.14□□□□□ -0.47
USE1-203ENST00000593597 LINC01465Q8N7H1 131 aa12.14□□□□□ -0.47
USE1-203ENST00000593597 VN1R2Q8NFZ6 395 aa12.14□□□□□ -0.47
USE1-203ENST00000593597 RASGRP4Q8TDF6 673 aa12.14□□□□□ -0.47
USE1-203ENST00000593597 POF1BQ8WVV4 589 aa12.14□□□□□ -0.47
USE1-203ENST00000593597 FTHL17Q9BXU8 183 aa12.14□□□□□ -0.47
USE1-203ENST00000593597 IGFLR1Q9H665 355 aa12.14□□□□□ -0.47
USE1-203ENST00000593597 RNF19AQ9NV58 838 aa12.14□□□□□ -0.47
USE1-203ENST00000593597 HCN4Q9Y3Q4 1203 aa12.14□□□□□ -0.47
USE1-203ENST00000593597 COL1A2P08123 1366 aa12.14□□□□□ -0.47
USE1-203ENST00000593597 ESYT2A0FGR8 921 aa12.13□□□□□ -0.47
USE1-203ENST00000593597 DCXO43602 365 aa12.13□□□□□ -0.47
USE1-203ENST00000593597 HBP1O60381 514 aa12.13□□□□□ -0.47
USE1-203ENST00000593597 GPR32O75388 356 aa12.13□□□□□ -0.47
USE1-203ENST00000593597 IBSPP21815 317 aaPredicted RBP12.13□□□□□ -0.47
USE1-203ENST00000593597 SARSP49591 514 aaKnown RBP12.13□□□□□ -0.47
USE1-203ENST00000593597 RCAN1P53805 252 aa12.13□□□□□ -0.47
USE1-203ENST00000593597 SMAD4Q13485 552 aaKnown RBP12.13□□□□□ -0.47
USE1-203ENST00000593597 DSC3Q14574 896 aa12.13□□□□□ -0.47
USE1-203ENST00000593597 NTRK3Q16288 839 aa12.13□□□□□ -0.47
USE1-203ENST00000593597 KIZQ2M2Z5 673 aa12.13□□□□□ -0.47
USE1-203ENST00000593597 FAM102BQ5T8I3 360 aa12.13□□□□□ -0.47
USE1-203ENST00000593597 RNF20Q5VTR2 975 aa12.13□□□□□ -0.47
USE1-203ENST00000593597 SWSAP1Q6NVH7 229 aa12.13□□□□□ -0.47
USE1-203ENST00000593597 SYNE3Q6ZMZ3 975 aa12.13□□□□□ -0.47
USE1-203ENST00000593597 TEX2Q8IWB9 1127 aa12.13□□□□□ -0.47
USE1-203ENST00000593597 OSMRQ99650 979 aa12.13□□□□□ -0.47
USE1-203ENST00000593597 ZMYND12Q9H0C1 365 aa12.13□□□□□ -0.47
USE1-203ENST00000593597 CWH43Q9H720 699 aa12.13□□□□□ -0.47
USE1-203ENST00000593597 ZNF302Q9NR11 478 aa12.13□□□□□ -0.47
USE1-203ENST00000593597 PRKAG3Q9UGI9 489 aa12.13□□□□□ -0.47
USE1-203ENST00000593597 GINS2Q9Y248 185 aa12.13□□□□□ -0.47
USE1-203ENST00000593597 MAFBQ9Y5Q3 323 aaPredicted RBP12.13□□□□□ -0.47
USE1-203ENST00000593597 SNX14Q9Y5W7 946 aa12.13□□□□□ -0.47
USE1-203ENST00000593597 ARID2Q68CP9 1835 aa12.12□□□□□ -0.47
USE1-203ENST00000593597 M0QZ92 97 aa12.12□□□□□ -0.47
USE1-203ENST00000593597 IPO5O00410 1097 aaKnown RBP12.12□□□□□ -0.47
USE1-203ENST00000593597 BACH1O14867 736 aa12.12□□□□□ -0.47
USE1-203ENST00000593597 ZNF862O60290 1169 aa12.12□□□□□ -0.47
USE1-203ENST00000593597 CDC45O75419 566 aa12.12□□□□□ -0.47
USE1-203ENST00000593597 VTNP04004 478 aa12.12□□□□□ -0.47
USE1-203ENST00000593597 RPLP2P05387 115 aaKnown RBP12.12□□□□□ -0.47
USE1-203ENST00000593597 FGFR1P11362 822 aa12.12□□□□□ -0.47
USE1-203ENST00000593597 SLC26A2P50443 739 aa12.12□□□□□ -0.47
USE1-203ENST00000593597 METAP2P50579 478 aaKnown RBP eCLIP12.12□□□□□ -0.47
USE1-203ENST00000593597 CLCN3P51790 818 aa12.12□□□□□ -0.47
USE1-203ENST00000593597 NFX1Q12986 1120 aaKnown RBP12.12□□□□□ -0.47
USE1-203ENST00000593597 UGCGQ16739 394 aa12.12□□□□□ -0.47
USE1-203ENST00000593597 PDXDC2PQ6P474 469 aa12.12□□□□□ -0.47
USE1-203ENST00000593597 Q6ZUG5 572 aa12.12□□□□□ -0.47
USE1-203ENST00000593597 NME8Q8N427 588 aa12.12□□□□□ -0.47
USE1-203ENST00000593597 EFHBQ8N7U6 833 aa12.12□□□□□ -0.47
USE1-203ENST00000593597 BRF1Q92994 677 aa12.12□□□□□ -0.47
USE1-203ENST00000593597 PHKBQ93100 1093 aa12.12□□□□□ -0.47
USE1-203ENST00000593597 ADAM2Q99965 735 aa12.12□□□□□ -0.47
USE1-203ENST00000593597 AGXT2Q9BYV1 514 aa12.12□□□□□ -0.47
USE1-203ENST00000593597 RGS18Q9NS28 235 aa12.12□□□□□ -0.47
USE1-203ENST00000593597 MUTYHQ9UIF7 546 aa12.12□□□□□ -0.47
USE1-203ENST00000593597 CD207Q9UJ71 328 aa12.12□□□□□ -0.47
USE1-203ENST00000593597 BARX2Q9UMQ3 279 aaPredicted RBP12.12□□□□□ -0.47
USE1-203ENST00000593597 ST3GAL5Q9UNP4 418 aa12.12□□□□□ -0.47
USE1-203ENST00000593597 RPS6KA5O75582 802 aa12.11□□□□□ -0.47
USE1-203ENST00000593597 EYA4O95677 639 aa12.11□□□□□ -0.47
USE1-203ENST00000593597 STAG3L1P0CL83 205 aa12.11□□□□□ -0.47
USE1-203ENST00000593597 HSPA4P34932 840 aa12.11□□□□□ -0.47
USE1-203ENST00000593597 ZNF76P36508 570 aa12.11□□□□□ -0.47
USE1-203ENST00000593597 NRIP1P48552 1158 aa12.11□□□□□ -0.47
USE1-203ENST00000593597 ERVFC1P60507 584 aa12.11□□□□□ -0.47
USE1-203ENST00000593597 NAALADL2Q58DX5 795 aa12.11□□□□□ -0.47
USE1-203ENST00000593597 ZNF484Q5JVG2 852 aa12.11□□□□□ -0.47
USE1-203ENST00000593597 FAM160B1Q5W0V3 765 aa12.11□□□□□ -0.47
USE1-203ENST00000593597 ZNF746Q6NUN9 644 aaPredicted RBP12.11□□□□□ -0.47
USE1-203ENST00000593597 LRRC55Q6ZSA7 311 aa12.11□□□□□ -0.47
USE1-203ENST00000593597 CENPQQ7L2Z9 268 aaPredicted RBP12.11□□□□□ -0.47
USE1-203ENST00000593597 RBM23Q86U06 439 aaKnown RBP12.11□□□□□ -0.47
USE1-203ENST00000593597 SMRP1Q8NCR6 262 aa12.11□□□□□ -0.47
USE1-203ENST00000593597 GJA10Q969M2 543 aa12.11□□□□□ -0.47
USE1-203ENST00000593597 ZNF577Q9BSK1 485 aa12.11□□□□□ -0.47
USE1-203ENST00000593597 USP34Q70CQ2 3546 aa12.11□□□□□ -0.47
USE1-203ENST00000593597 TBKBP1A7MCY6 615 aa12.1□□□□□ -0.47
USE1-203ENST00000593597 FSCN2O14926 492 aa12.1□□□□□ -0.47
USE1-203ENST00000593597 PRPF3O43395 683 aaKnown RBP12.1□□□□□ -0.47
USE1-203ENST00000593597 NCK2O43639 380 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms