RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 ECM1Q16610 540 aa11.13□□□□□ -0.63
TPM4-216ENST00000592822 PLA2G4FQ68DD2 849 aa11.13□□□□□ -0.63
TPM4-216ENST00000592822 ATL3Q6DD88 541 aa11.13□□□□□ -0.63
TPM4-216ENST00000592822 ERMNQ8TAM6 284 aa11.13□□□□□ -0.63
TPM4-216ENST00000592822 SH2D3AQ9BRG2 576 aa11.13□□□□□ -0.63
TPM4-216ENST00000592822 PPP1R12CQ9BZL4 782 aa11.13□□□□□ -0.63
TPM4-216ENST00000592822 WNT8AQ9H1J5 351 aa11.13□□□□□ -0.63
TPM4-216ENST00000592822 HIPK3Q9H422 1215 aa11.13□□□□□ -0.63
TPM4-216ENST00000592822 PRKAG2Q9UGJ0 569 aa11.13□□□□□ -0.63
TPM4-216ENST00000592822 PCDHA2Q9Y5H9 948 aa11.13□□□□□ -0.63
TPM4-216ENST00000592822 SRPRBQ9Y5M8 271 aaKnown RBP11.13□□□□□ -0.63
TPM4-216ENST00000592822 TANC1Q9C0D5 1861 aa11.12□□□□□ -0.63
TPM4-216ENST00000592822 PITPNM1O00562 1244 aa11.12□□□□□ -0.63
TPM4-216ENST00000592822 YEATS4O95619 227 aa11.12□□□□□ -0.63
TPM4-216ENST00000592822 CKBP12277 381 aa11.12□□□□□ -0.63
TPM4-216ENST00000592822 LONP1P36776 959 aaKnown RBP11.12□□□□□ -0.63
TPM4-216ENST00000592822 RBL2Q08999 1139 aa11.12□□□□□ -0.63
TPM4-216ENST00000592822 BFSP2Q13515 415 aa11.12□□□□□ -0.63
TPM4-216ENST00000592822 MTERF2Q49AM1 385 aa11.12□□□□□ -0.63
TPM4-216ENST00000592822 KRT79Q5XKE5 535 aa11.12□□□□□ -0.63
TPM4-216ENST00000592822 HAUS3Q68CZ6 603 aa11.12□□□□□ -0.63
TPM4-216ENST00000592822 TAF2Q6P1X5 1199 aa11.12□□□□□ -0.63
TPM4-216ENST00000592822 TRAF7Q6Q0C0 670 aa11.12□□□□□ -0.63
TPM4-216ENST00000592822 POTEGQ6S5H5 508 aa11.12□□□□□ -0.63
TPM4-216ENST00000592822 OTUD6AQ7L8S5 288 aa11.12□□□□□ -0.63
TPM4-216ENST00000592822 CAGE1Q8TC20 777 aa11.12□□□□□ -0.63
TPM4-216ENST00000592822 SNX29Q8TEQ0 813 aa11.12□□□□□ -0.63
TPM4-216ENST00000592822 PIGOQ8TEQ8 1089 aa11.12□□□□□ -0.63
TPM4-216ENST00000592822 DNAJB3Q8WWF6 145 aa11.12□□□□□ -0.63
TPM4-216ENST00000592822 BADQ92934 168 aa11.12□□□□□ -0.63
TPM4-216ENST00000592822 AK8Q96MA6 479 aa11.12□□□□□ -0.63
TPM4-216ENST00000592822 CLIC6Q96NY7 704 aa11.12□□□□□ -0.63
TPM4-216ENST00000592822 CSRNP2Q9H175 543 aa11.12□□□□□ -0.63
TPM4-216ENST00000592822 CYP26B1Q9NR63 512 aa11.12□□□□□ -0.63
TPM4-216ENST00000592822 STK24Q9Y6E0 443 aa11.12□□□□□ -0.63
TPM4-216ENST00000592822 SCN5AQ14524 2016 aa11.11□□□□□ -0.63
TPM4-216ENST00000592822 SMIM35A0A1B0GVV1 85 aa11.11□□□□□ -0.63
TPM4-216ENST00000592822 RBAK-RBAKDNI3L0D1 243 aa11.11□□□□□ -0.63
TPM4-216ENST00000592822 SPTLC2O15270 562 aa11.11□□□□□ -0.63
TPM4-216ENST00000592822 PPP6R2O75170 966 aa11.11□□□□□ -0.63
TPM4-216ENST00000592822 MAFO75444 373 aaPredicted RBP11.11□□□□□ -0.63
TPM4-216ENST00000592822 XRCC6P12956 609 aaKnown RBP eCLIP11.11□□□□□ -0.63
TPM4-216ENST00000592822 MUTP22033 750 aa11.11□□□□□ -0.63
TPM4-216ENST00000592822 THPOP40225 353 aa11.11□□□□□ -0.63
TPM4-216ENST00000592822 CCL23P55773 120 aa11.11□□□□□ -0.63
TPM4-216ENST00000592822 MDM2Q00987 491 aaPredicted RBP11.11□□□□□ -0.63
TPM4-216ENST00000592822 GRB10Q13322 594 aa11.11□□□□□ -0.63
TPM4-216ENST00000592822 XKR9Q5GH70 373 aa11.11□□□□□ -0.63
TPM4-216ENST00000592822 SPECC1Q5M775 1068 aa11.11□□□□□ -0.63
TPM4-216ENST00000592822 HYIQ5T013 277 aa11.11□□□□□ -0.63
TPM4-216ENST00000592822 ZNF618Q5T7W0 954 aa11.11□□□□□ -0.63
TPM4-216ENST00000592822 MFSD5Q6N075 450 aa11.11□□□□□ -0.63
TPM4-216ENST00000592822 USP49Q70CQ1 688 aa11.11□□□□□ -0.63
TPM4-216ENST00000592822 RPAINQ86UA6 219 aa11.11□□□□□ -0.63
TPM4-216ENST00000592822 CABP7Q86V35 215 aa11.11□□□□□ -0.63
TPM4-216ENST00000592822 KIAA0319LQ8IZA0 1049 aa11.11□□□□□ -0.63
TPM4-216ENST00000592822 CCDC155Q8N6L0 562 aa11.11□□□□□ -0.63
TPM4-216ENST00000592822 LINC01465Q8N7H1 131 aa11.11□□□□□ -0.63
TPM4-216ENST00000592822 KRI1Q8N9T8 703 aaKnown RBP11.11□□□□□ -0.63
TPM4-216ENST00000592822 CEP170P1Q96L14 293 aa11.11□□□□□ -0.63
TPM4-216ENST00000592822 PNMA5Q96PV4 448 aa11.11□□□□□ -0.63
TPM4-216ENST00000592822 NACC1Q96RE7 527 aa11.11□□□□□ -0.63
TPM4-216ENST00000592822 FAM49AQ9H0Q0 323 aaPredicted RBP11.11□□□□□ -0.63
TPM4-216ENST00000592822 ANKEF1Q9NU02 776 aa11.11□□□□□ -0.63
TPM4-216ENST00000592822 DDX19AQ9NUU7 478 aaKnown RBP11.11□□□□□ -0.63
TPM4-216ENST00000592822 RCOR1Q9UKL0 485 aa11.11□□□□□ -0.63
TPM4-216ENST00000592822 CFAP45Q9UL16 551 aa11.11□□□□□ -0.63
TPM4-216ENST00000592822 CIZ1Q9ULV3 898 aaPredicted RBP11.11□□□□□ -0.63
TPM4-216ENST00000592822 KIAA1024Q9UPX6 916 aa11.11□□□□□ -0.63
TPM4-216ENST00000592822 SIP14410 1827 aa11.1□□□□□ -0.63
TPM4-216ENST00000592822 LOXHD1Q8IVV2 1947 aa11.1□□□□□ -0.63
TPM4-216ENST00000592822 IGKV6-21A0A0C4DH24 114 aa11.1□□□□□ -0.63
TPM4-216ENST00000592822 MAGEB2O15479 319 aa11.1□□□□□ -0.63
TPM4-216ENST00000592822 CHRNA1P02708 482 aa11.1□□□□□ -0.63
TPM4-216ENST00000592822 IQCF3P0C7M6 154 aa11.1□□□□□ -0.63
TPM4-216ENST00000592822 SELPP16109 830 aa11.1□□□□□ -0.63
TPM4-216ENST00000592822 UBA7P41226 1012 aa11.1□□□□□ -0.63
TPM4-216ENST00000592822 MAGEA10P43363 369 aaPredicted RBP11.1□□□□□ -0.63
TPM4-216ENST00000592822 RARRES1P49788 294 aa11.1□□□□□ -0.63
TPM4-216ENST00000592822 TBC1D8BQ0IIM8 1120 aa11.1□□□□□ -0.63
TPM4-216ENST00000592822 MKRN4PQ13434 485 aaPredicted RBP11.1□□□□□ -0.63
TPM4-216ENST00000592822 MBTPS1Q14703 1052 aa11.1□□□□□ -0.63
TPM4-216ENST00000592822 GPNMBQ14956 572 aa11.1□□□□□ -0.63
TPM4-216ENST00000592822 FAM26DQ5JW98 314 aa11.1□□□□□ -0.63
TPM4-216ENST00000592822 EFCAB12Q6NXP0 572 aa11.1□□□□□ -0.63
TPM4-216ENST00000592822 LRRC8DQ7L1W4 858 aa11.1□□□□□ -0.63
TPM4-216ENST00000592822 KCNK18Q7Z418 384 aa11.1□□□□□ -0.63
TPM4-216ENST00000592822 LRRC71Q8N4P6 559 aa11.1□□□□□ -0.63
TPM4-216ENST00000592822 METTL13Q8N6R0 699 aa11.1□□□□□ -0.63
TPM4-216ENST00000592822 RETREG2Q8NC44 543 aa11.1□□□□□ -0.63
TPM4-216ENST00000592822 VWCEQ96DN2 955 aa11.1□□□□□ -0.63
TPM4-216ENST00000592822 SCLYQ96I15 445 aa11.1□□□□□ -0.63
TPM4-216ENST00000592822 EPSTI1Q96J88 318 aa11.1□□□□□ -0.63
TPM4-216ENST00000592822 PLIN2Q99541 437 aa11.1□□□□□ -0.63
TPM4-216ENST00000592822 GDF15Q99988 308 aa11.1□□□□□ -0.63
TPM4-216ENST00000592822 LBHD1Q9BQE6 289 aaPredicted RBP11.1□□□□□ -0.63
TPM4-216ENST00000592822 DHX33Q9H6R0 707 aaKnown RBP11.1□□□□□ -0.63
TPM4-216ENST00000592822 DBR1Q9UK59 544 aaKnown RBP11.1□□□□□ -0.63
TPM4-216ENST00000592822 PPME1Q9Y570 386 aa11.1□□□□□ -0.63
TPM4-216ENST00000592822 ATP6V1DQ9Y5K8 247 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms