RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 PCDHA8Q9Y5H6 950 aa7.28□□□□□ -1.24
VPS4B-205ENST00000591383 KIAA0100Q14667 2235 aaKnown RBP7.28□□□□□ -1.24
VPS4B-205ENST00000591383 SNAI1O95863 264 aaPredicted RBP7.27□□□□□ -1.25
VPS4B-205ENST00000591383 FOSP01100 380 aaPredicted RBP7.27□□□□□ -1.25
VPS4B-205ENST00000591383 AKR1A1P14550 325 aa7.27□□□□□ -1.25
VPS4B-205ENST00000591383 EDNRBP24530 442 aa7.27□□□□□ -1.25
VPS4B-205ENST00000591383 ZNF76P36508 570 aa7.27□□□□□ -1.25
VPS4B-205ENST00000591383 SREBF1P36956 1147 aa7.27□□□□□ -1.25
VPS4B-205ENST00000591383 ACVR2BQ13705 512 aa7.27□□□□□ -1.25
VPS4B-205ENST00000591383 NONOQ15233 471 aaKnown RBP eCLIP7.27□□□□□ -1.25
VPS4B-205ENST00000591383 NPY5RQ15761 445 aa7.27□□□□□ -1.25
VPS4B-205ENST00000591383 STXBP2Q15833 593 aa7.27□□□□□ -1.25
VPS4B-205ENST00000591383 CCDC144BQ3MJ40 725 aa7.27□□□□□ -1.25
VPS4B-205ENST00000591383 GNPTABQ3T906 1256 aa7.27□□□□□ -1.25
VPS4B-205ENST00000591383 GJC2Q5T442 439 aaPredicted RBP7.27□□□□□ -1.25
VPS4B-205ENST00000591383 MAP3K21Q5TCX8 1036 aa7.27□□□□□ -1.25
VPS4B-205ENST00000591383 PCNX4Q63HM2 1172 aa7.27□□□□□ -1.25
VPS4B-205ENST00000591383 MCTP2Q6DN12 878 aa7.27□□□□□ -1.25
VPS4B-205ENST00000591383 ALG1LQ6GMV1 187 aa7.27□□□□□ -1.25
VPS4B-205ENST00000591383 GALNT17Q6IS24 598 aa7.27□□□□□ -1.25
VPS4B-205ENST00000591383 FAM177A1Q8N128 213 aaPredicted RBP7.27□□□□□ -1.25
VPS4B-205ENST00000591383 ABHD8Q96I13 439 aa7.27□□□□□ -1.25
VPS4B-205ENST00000591383 IWS1Q96ST2 819 aa7.27□□□□□ -1.25
VPS4B-205ENST00000591383 PHACTR1Q9C0D0 580 aa7.27□□□□□ -1.25
VPS4B-205ENST00000591383 MAF1Q9H063 256 aa7.27□□□□□ -1.25
VPS4B-205ENST00000591383 ABHD16BQ9H3Z7 469 aa7.27□□□□□ -1.25
VPS4B-205ENST00000591383 MAP3K20Q9NYL2 800 aaKnown RBP7.27□□□□□ -1.25
VPS4B-205ENST00000591383 HCSTQ9UBK5 93 aa7.27□□□□□ -1.25
VPS4B-205ENST00000591383 MRVI1Q9Y6F6 885 aa7.27□□□□□ -1.25
VPS4B-205ENST00000591383 LOC102724159A0A0B4J2E5 919 aa7.26□□□□□ -1.25
VPS4B-205ENST00000591383 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.26□□□□□ -1.25
VPS4B-205ENST00000591383 ZNF865P0CJ78 1059 aaPredicted RBP7.26□□□□□ -1.25
VPS4B-205ENST00000591383 RARBP10826 455 aa7.26□□□□□ -1.25
VPS4B-205ENST00000591383 ATP2B1P20020 1258 aa7.26□□□□□ -1.25
VPS4B-205ENST00000591383 PDCP20941 246 aa7.26□□□□□ -1.25
VPS4B-205ENST00000591383 PTGS1P23219 599 aa7.26□□□□□ -1.25
VPS4B-205ENST00000591383 ADCYAP1R1P41586 468 aa7.26□□□□□ -1.25
VPS4B-205ENST00000591383 PTGIRP43119 386 aa7.26□□□□□ -1.25
VPS4B-205ENST00000591383 SOX10P56693 466 aa7.26□□□□□ -1.25
VPS4B-205ENST00000591383 FANCCQ00597 558 aa7.26□□□□□ -1.25
VPS4B-205ENST00000591383 SP4Q02446 784 aa7.26□□□□□ -1.25
VPS4B-205ENST00000591383 NNTQ13423 1086 aa7.26□□□□□ -1.25
VPS4B-205ENST00000591383 PWP2Q15269 919 aaKnown RBP7.26□□□□□ -1.25
VPS4B-205ENST00000591383 SF3A1Q15459 793 aaKnown RBP7.26□□□□□ -1.25
VPS4B-205ENST00000591383 INF2Q27J81 1249 aa7.26□□□□□ -1.25
VPS4B-205ENST00000591383 LARP1BQ659C4 914 aaKnown RBP7.26□□□□□ -1.25
VPS4B-205ENST00000591383 MAMDC4Q6UXC1 1216 aa7.26□□□□□ -1.25
VPS4B-205ENST00000591383 Q6ZVU0 165 aa7.26□□□□□ -1.25
VPS4B-205ENST00000591383 TLK2Q86UE8 772 aa7.26□□□□□ -1.25
VPS4B-205ENST00000591383 FERMT3Q86UX7 667 aa7.26□□□□□ -1.25
VPS4B-205ENST00000591383 NT5DC4Q86YG4 428 aa7.26□□□□□ -1.25
VPS4B-205ENST00000591383 TEX2Q8IWB9 1127 aa7.26□□□□□ -1.25
VPS4B-205ENST00000591383 FBXO18Q8NFZ0 1043 aa7.26□□□□□ -1.25
VPS4B-205ENST00000591383 OR6J1Q8NGC5 347 aa7.26□□□□□ -1.25
VPS4B-205ENST00000591383 TBCKQ8TEA7 893 aa7.26□□□□□ -1.25
VPS4B-205ENST00000591383 SCFD2Q8WU76 684 aa7.26□□□□□ -1.25
VPS4B-205ENST00000591383 UBXN4Q92575 508 aa7.26□□□□□ -1.25
VPS4B-205ENST00000591383 INTS4Q96HW7 963 aaKnown RBP7.26□□□□□ -1.25
VPS4B-205ENST00000591383 DEFB118Q96PH6 123 aa7.26□□□□□ -1.25
VPS4B-205ENST00000591383 UIMC1Q96RL1 719 aa7.26□□□□□ -1.25
VPS4B-205ENST00000591383 PDGFCQ9NRA1 345 aa7.26□□□□□ -1.25
VPS4B-205ENST00000591383 METTL5Q9NRN9 209 aaKnown RBP7.26□□□□□ -1.25
VPS4B-205ENST00000591383 RTEL1Q9NZ71 1219 aa7.26□□□□□ -1.25
VPS4B-205ENST00000591383 DDX20Q9UHI6 824 aaKnown RBP7.26□□□□□ -1.25
VPS4B-205ENST00000591383 TCEAL9Q9UHQ7 104 aa7.26□□□□□ -1.25
VPS4B-205ENST00000591383 NRBP1Q9UHY1 535 aa7.26□□□□□ -1.25
VPS4B-205ENST00000591383 SYNRGQ9UMZ2 1314 aa7.26□□□□□ -1.25
VPS4B-205ENST00000591383 CCDC85CA6NKD9 419 aa7.25□□□□□ -1.25
VPS4B-205ENST00000591383 BTBD18B2RXH4 712 aa7.25□□□□□ -1.25
VPS4B-205ENST00000591383 KIF28PB7ZC32 967 aa7.25□□□□□ -1.25
VPS4B-205ENST00000591383 SEPT4O43236 478 aa7.25□□□□□ -1.25
VPS4B-205ENST00000591383 ADCY6O43306 1168 aa7.25□□□□□ -1.25
VPS4B-205ENST00000591383 FIBPO43427 364 aa7.25□□□□□ -1.25
VPS4B-205ENST00000591383 EIF3JO75822 258 aaKnown RBP7.25□□□□□ -1.25
VPS4B-205ENST00000591383 ARIH2O95376 493 aa7.25□□□□□ -1.25
VPS4B-205ENST00000591383 TDP2O95551 362 aa7.25□□□□□ -1.25
VPS4B-205ENST00000591383 TXNP10599 105 aaKnown RBP7.25□□□□□ -1.25
VPS4B-205ENST00000591383 UBA1P22314 1058 aaKnown RBP7.25□□□□□ -1.25
VPS4B-205ENST00000591383 MRPS9P82933 396 aaKnown RBP7.25□□□□□ -1.25
VPS4B-205ENST00000591383 SETQ01105 290 aaPredicted RBP7.25□□□□□ -1.25
VPS4B-205ENST00000591383 TNFAIP2Q03169 654 aa7.25□□□□□ -1.25
VPS4B-205ENST00000591383 MTMR1Q13613 665 aa7.25□□□□□ -1.25
VPS4B-205ENST00000591383 TTLL4Q14679 1199 aa7.25□□□□□ -1.25
VPS4B-205ENST00000591383 LETM2Q2VYF4 491 aa7.25□□□□□ -1.25
VPS4B-205ENST00000591383 PRR16Q569H4 304 aa7.25□□□□□ -1.25
VPS4B-205ENST00000591383 EARS2Q5JPH6 523 aaKnown RBP7.25□□□□□ -1.25
VPS4B-205ENST00000591383 XRRA1Q6P2D8 792 aa7.25□□□□□ -1.25
VPS4B-205ENST00000591383 NEK8Q86SG6 692 aa7.25□□□□□ -1.25
VPS4B-205ENST00000591383 NLRX1Q86UT6 975 aa7.25□□□□□ -1.25
VPS4B-205ENST00000591383 NOSTRINQ8IVI9 506 aa7.25□□□□□ -1.25
VPS4B-205ENST00000591383 MORC4Q8TE76 937 aa7.25□□□□□ -1.25
VPS4B-205ENST00000591383 COPS5Q92905 334 aa7.25□□□□□ -1.25
VPS4B-205ENST00000591383 TNFRSF25Q93038 417 aa7.25□□□□□ -1.25
VPS4B-205ENST00000591383 RNF34Q969K3 372 aa7.25□□□□□ -1.25
VPS4B-205ENST00000591383 NIFKQ9BYG3 293 aaKnown RBP7.25□□□□□ -1.25
VPS4B-205ENST00000591383 WDR11Q9BZH6 1224 aa7.25□□□□□ -1.25
VPS4B-205ENST00000591383 KATNBL1Q9H079 304 aa7.25□□□□□ -1.25
VPS4B-205ENST00000591383 AP5M1Q9H0R1 490 aa7.25□□□□□ -1.25
VPS4B-205ENST00000591383 XPNPEP3Q9NQH7 507 aa7.25□□□□□ -1.25
VPS4B-205ENST00000591383 PAK6Q9NQU5 681 aaPredicted RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms