RNA–Protein interactions for RNA: ENST00000590530.5

GCDH-212, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-212ENST00000590530 SPATA33Q96N06 139 aa18.84■□□□□ 0.61
GCDH-212ENST00000590530 APBA2Q99767 749 aa18.84■□□□□ 0.61
GCDH-212ENST00000590530 IGKV6D-21A0A0A0MT36 114 aa18.83■□□□□ 0.6
GCDH-212ENST00000590530 SFI1A8K8P3 1242 aa18.83■□□□□ 0.6
GCDH-212ENST00000590530 PSMA7O14818 248 aa18.83■□□□□ 0.6
GCDH-212ENST00000590530 TCF7P36402 384 aaPredicted RBP18.83■□□□□ 0.6
GCDH-212ENST00000590530 RARRES1P49788 294 aa18.83■□□□□ 0.6
GCDH-212ENST00000590530 IRX5P78411 483 aaPredicted RBP18.83■□□□□ 0.6
GCDH-212ENST00000590530 KCNV1Q6PIU1 500 aa18.83■□□□□ 0.6
GCDH-212ENST00000590530 SOCS4Q8WXH5 440 aa18.83■□□□□ 0.6
GCDH-212ENST00000590530 DHTKD1Q96HY7 919 aaPredicted RBP18.83■□□□□ 0.6
GCDH-212ENST00000590530 ABHD16BQ9H3Z7 469 aa18.83■□□□□ 0.6
GCDH-212ENST00000590530 SLC5A4Q9NY91 659 aa18.83■□□□□ 0.6
GCDH-212ENST00000590530 TBC1D7Q9P0N9 293 aa18.83■□□□□ 0.6
GCDH-212ENST00000590530 TSKSQ9UJT2 592 aa18.83■□□□□ 0.6
GCDH-212ENST00000590530 SERPINC1P01008 464 aa18.82■□□□□ 0.6
GCDH-212ENST00000590530 ZNF865P0CJ78 1059 aaPredicted RBP18.82■□□□□ 0.6
GCDH-212ENST00000590530 STX17P56962 302 aa18.82■□□□□ 0.6
GCDH-212ENST00000590530 PRKCEQ02156 737 aa18.82■□□□□ 0.6
GCDH-212ENST00000590530 TRIM32Q13049 653 aa18.82■□□□□ 0.6
GCDH-212ENST00000590530 PSMD2Q13200 908 aa18.82■□□□□ 0.6
GCDH-212ENST00000590530 MAEAQ7L5Y9 396 aa18.82■□□□□ 0.6
GCDH-212ENST00000590530 KIAA0895Q8NCT3 520 aa18.82■□□□□ 0.6
GCDH-212ENST00000590530 CD99L2Q8TCZ2 262 aa18.82■□□□□ 0.6
GCDH-212ENST00000590530 SLC39A2Q9NP94 309 aa18.82■□□□□ 0.6
GCDH-212ENST00000590530 ZNF302Q9NR11 478 aa18.82■□□□□ 0.6
GCDH-212ENST00000590530 SAMSN1Q9NSI8 373 aaKnown RBP18.82■□□□□ 0.6
GCDH-212ENST00000590530 PANK4Q9NVE7 773 aa18.82■□□□□ 0.6
GCDH-212ENST00000590530 IGSF9BQ9UPX0 1349 aa18.82■□□□□ 0.6
GCDH-212ENST00000590530 UBASH3AP57075 661 aa18.82■□□□□ 0.6
GCDH-212ENST00000590530 COASYQ13057 564 aa18.82■□□□□ 0.6
GCDH-212ENST00000590530 PADI6Q6TGC4 694 aa18.82■□□□□ 0.6
GCDH-212ENST00000590530 SEPT1Q8WYJ6 367 aa18.82■□□□□ 0.6
GCDH-212ENST00000590530 TRIB2Q92519 343 aa18.82■□□□□ 0.6
GCDH-212ENST00000590530 CFHR5Q9BXR6 569 aa18.82■□□□□ 0.6
GCDH-212ENST00000590530 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.82■□□□□ 0.6
GCDH-212ENST00000590530 IMPACTQ9P2X3 320 aa18.82■□□□□ 0.6
GCDH-212ENST00000590530 MAFBQ9Y5Q3 323 aaPredicted RBP18.82■□□□□ 0.6
GCDH-212ENST00000590530 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.82■□□□□ 0.6
GCDH-212ENST00000590530 ARHGEF35A5YM69 484 aa18.81■□□□□ 0.6
GCDH-212ENST00000590530 KRT18P05783 430 aaKnown RBP18.81■□□□□ 0.6
GCDH-212ENST00000590530 LRRC41Q15345 812 aa18.81■□□□□ 0.6
GCDH-212ENST00000590530 OLFML2BQ68BL8 750 aa18.81■□□□□ 0.6
GCDH-212ENST00000590530 TRPV1Q8NER1 839 aa18.81■□□□□ 0.6
GCDH-212ENST00000590530 ZHX3Q9H4I2 956 aa18.81■□□□□ 0.6
GCDH-212ENST00000590530 FRMD3A2A2Y4 597 aa18.8■□□□□ 0.6
GCDH-212ENST00000590530 XKR9Q5GH70 373 aa18.8■□□□□ 0.6
GCDH-212ENST00000590530 MSL3Q8N5Y2 521 aaKnown RBP18.8■□□□□ 0.6
GCDH-212ENST00000590530 AFG1LQ8WV93 481 aa18.8■□□□□ 0.6
GCDH-212ENST00000590530 ATP6V0A1Q93050 837 aa18.8■□□□□ 0.6
GCDH-212ENST00000590530 DBR1Q9UK59 544 aaKnown RBP18.8■□□□□ 0.6
GCDH-212ENST00000590530 PCDHA2Q9Y5H9 948 aa18.8■□□□□ 0.6
GCDH-212ENST00000590530 MGAMO43451 1857 aa18.8■□□□□ 0.6
GCDH-212ENST00000590530 BICDL2A1A5D9 508 aa18.8■□□□□ 0.6
GCDH-212ENST00000590530 GPR25O00155 361 aa18.8■□□□□ 0.6
GCDH-212ENST00000590530 NOP56O00567 594 aaKnown RBP18.8■□□□□ 0.6
GCDH-212ENST00000590530 USO1O60763 962 aaKnown RBP18.8■□□□□ 0.6
GCDH-212ENST00000590530 CDK11BP21127 795 aaKnown RBP18.8■□□□□ 0.6
GCDH-212ENST00000590530 MSNP26038 577 aaKnown RBP18.8■□□□□ 0.6
GCDH-212ENST00000590530 MARK3P27448 753 aa18.8■□□□□ 0.6
GCDH-212ENST00000590530 SOX10P56693 466 aa18.8■□□□□ 0.6
GCDH-212ENST00000590530 SPAG1Q07617 926 aa18.8■□□□□ 0.6
GCDH-212ENST00000590530 TPD52L1Q16890 204 aaPredicted RBP18.8■□□□□ 0.6
GCDH-212ENST00000590530 DUSP28Q4G0W2 176 aa18.8■□□□□ 0.6
GCDH-212ENST00000590530 CCDC186Q7Z3E2 898 aa18.8■□□□□ 0.6
GCDH-212ENST00000590530 CCDC65Q8IXS2 484 aa18.8■□□□□ 0.6
GCDH-212ENST00000590530 DAW1Q8N136 415 aa18.8■□□□□ 0.6
GCDH-212ENST00000590530 GPRC5CQ9NQ84 441 aa18.8■□□□□ 0.6
GCDH-212ENST00000590530 GH1P01241 217 aa18.79■□□□□ 0.6
GCDH-212ENST00000590530 CCNE1P24864 410 aa18.79■□□□□ 0.6
GCDH-212ENST00000590530 STAT5BP51692 787 aa18.79■□□□□ 0.6
GCDH-212ENST00000590530 PMS1P54277 932 aaKnown RBP18.79■□□□□ 0.6
GCDH-212ENST00000590530 MAPK7Q13164 816 aa18.79■□□□□ 0.6
GCDH-212ENST00000590530 HERC4Q5GLZ8 1057 aaPredicted RBP18.79■□□□□ 0.6
GCDH-212ENST00000590530 TTI2Q6NXR4 508 aa18.79■□□□□ 0.6
GCDH-212ENST00000590530 FOXR2Q6PJQ5 311 aa18.79■□□□□ 0.6
GCDH-212ENST00000590530 SFR1Q86XK3 245 aa18.79■□□□□ 0.6
GCDH-212ENST00000590530 GUF1Q8N442 669 aaKnown RBP18.79■□□□□ 0.6
GCDH-212ENST00000590530 NOC3LQ8WTT2 800 aaKnown RBP18.79■□□□□ 0.6
GCDH-212ENST00000590530 P2RX5Q93086 422 aa18.79■□□□□ 0.6
GCDH-212ENST00000590530 CTAGE1Q96RT6 745 aa18.79■□□□□ 0.6
GCDH-212ENST00000590530 SEPT9Q9UHD8 586 aaPredicted RBP18.79■□□□□ 0.6
GCDH-212ENST00000590530 CASP5P51878 434 aa18.78■□□□□ 0.6
GCDH-212ENST00000590530 GSDMDP57764 484 aa18.78■□□□□ 0.6
GCDH-212ENST00000590530 TNFAIP2Q03169 654 aa18.78■□□□□ 0.6
GCDH-212ENST00000590530 IQSEC1Q6DN90 963 aa18.78■□□□□ 0.6
GCDH-212ENST00000590530 APTXQ7Z2E3 356 aaKnown RBP18.78■□□□□ 0.6
GCDH-212ENST00000590530 CEP170P1Q96L14 293 aa18.78■□□□□ 0.6
GCDH-212ENST00000590530 NRBP1Q9UHY1 535 aa18.78■□□□□ 0.6
GCDH-212ENST00000590530 A0A1B0GTH6 734 aa18.77■□□□□ 0.6
GCDH-212ENST00000590530 TRIM49BA6NDI0 452 aa18.77■□□□□ 0.6
GCDH-212ENST00000590530 HIP1RO75146 1068 aa18.77■□□□□ 0.6
GCDH-212ENST00000590530 LGR5O75473 907 aa18.77■□□□□ 0.6
GCDH-212ENST00000590530 ELNP15502 786 aa18.77■□□□□ 0.6
GCDH-212ENST00000590530 LAMC2Q13753 1193 aa18.77■□□□□ 0.6
GCDH-212ENST00000590530 HSP90AA4PQ58FG1 418 aa18.77■□□□□ 0.6
GCDH-212ENST00000590530 VSTM4Q8IW00 320 aa18.77■□□□□ 0.6
GCDH-212ENST00000590530 NAP1L5Q96NT1 182 aaPredicted RBP18.77■□□□□ 0.6
GCDH-212ENST00000590530 KCNF1Q9H3M0 494 aa18.77■□□□□ 0.6
GCDH-212ENST00000590530 THAP9Q9H5L6 903 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms