RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 TCF7P36402 384 aaPredicted RBP12.75□□□□□ -0.37
SMAD4-211ENST00000590499 NLRP5P59047 1200 aa12.75□□□□□ -0.37
SMAD4-211ENST00000590499 ZNF200P98182 395 aaPredicted RBP12.75□□□□□ -0.37
SMAD4-211ENST00000590499 ST3GAL1Q11201 340 aa12.75□□□□□ -0.37
SMAD4-211ENST00000590499 BFSP2Q13515 415 aa12.75□□□□□ -0.37
SMAD4-211ENST00000590499 PSRC1Q6PGN9 363 aaPredicted RBP12.75□□□□□ -0.37
SMAD4-211ENST00000590499 ZNF365Q70YC5 407 aa12.75□□□□□ -0.37
SMAD4-211ENST00000590499 CAGE1Q8TC20 777 aa12.75□□□□□ -0.37
SMAD4-211ENST00000590499 SEPT1Q8WYJ6 367 aa12.75□□□□□ -0.37
SMAD4-211ENST00000590499 WNT8BQ93098 351 aa12.75□□□□□ -0.37
SMAD4-211ENST00000590499 LENG9Q96B70 501 aa12.75□□□□□ -0.37
SMAD4-211ENST00000590499 NOD1Q9Y239 953 aa12.75□□□□□ -0.37
SMAD4-211ENST00000590499 GBF1Q92538 1859 aa12.74□□□□□ -0.37
SMAD4-211ENST00000590499 EMSYQ7Z589 1322 aa12.74□□□□□ -0.37
SMAD4-211ENST00000590499 DHX15O43143 795 aaKnown RBP12.74□□□□□ -0.37
SMAD4-211ENST00000590499 DTNBO60941 627 aa12.74□□□□□ -0.37
SMAD4-211ENST00000590499 LGR5O75473 907 aa12.74□□□□□ -0.37
SMAD4-211ENST00000590499 IQCF3P0C7M6 154 aa12.74□□□□□ -0.37
SMAD4-211ENST00000590499 FDPSP14324 419 aaKnown RBP12.74□□□□□ -0.37
SMAD4-211ENST00000590499 RFC2P35250 354 aa12.74□□□□□ -0.37
SMAD4-211ENST00000590499 RBM25P49756 843 aaKnown RBP12.74□□□□□ -0.37
SMAD4-211ENST00000590499 MMP16P51512 607 aa12.74□□□□□ -0.37
SMAD4-211ENST00000590499 ADAM17P78536 824 aa12.74□□□□□ -0.37
SMAD4-211ENST00000590499 PTK7Q13308 1070 aa12.74□□□□□ -0.37
SMAD4-211ENST00000590499 GPNMBQ14956 572 aa12.74□□□□□ -0.37
SMAD4-211ENST00000590499 UTP14CQ5TAP6 766 aaKnown RBP12.74□□□□□ -0.37
SMAD4-211ENST00000590499 GALNT17Q6IS24 598 aa12.74□□□□□ -0.37
SMAD4-211ENST00000590499 SERINC5Q86VE9 423 aa12.74□□□□□ -0.37
SMAD4-211ENST00000590499 PLA2G4DQ86XP0 818 aa12.74□□□□□ -0.37
SMAD4-211ENST00000590499 NECAB1Q8N987 351 aa12.74□□□□□ -0.37
SMAD4-211ENST00000590499 AFAP1L1Q8TED9 768 aa12.74□□□□□ -0.37
SMAD4-211ENST00000590499 HERVK_113Q902F9 699 aa12.74□□□□□ -0.37
SMAD4-211ENST00000590499 PCYT2Q99447 389 aa12.74□□□□□ -0.37
SMAD4-211ENST00000590499 PHF20Q9BVI0 1012 aa12.74□□□□□ -0.37
SMAD4-211ENST00000590499 SLC9A2Q9UBY0 812 aa12.74□□□□□ -0.37
SMAD4-211ENST00000590499 ZNF215Q9UL58 517 aaPredicted RBP12.74□□□□□ -0.37
SMAD4-211ENST00000590499 EYSQ5T1H1 3165 aa12.74□□□□□ -0.37
SMAD4-211ENST00000590499 MYH9P35579 1960 aaKnown RBP12.74□□□□□ -0.37
SMAD4-211ENST00000590499 J3QL48 77 aa12.73□□□□□ -0.37
SMAD4-211ENST00000590499 TRIM66O15016 1216 aa12.73□□□□□ -0.37
SMAD4-211ENST00000590499 ATG7O95352 703 aa12.73□□□□□ -0.37
SMAD4-211ENST00000590499 CCNE2O96020 404 aa12.73□□□□□ -0.37
SMAD4-211ENST00000590499 PFKMP08237 780 aa12.73□□□□□ -0.37
SMAD4-211ENST00000590499 CKBP12277 381 aa12.73□□□□□ -0.37
SMAD4-211ENST00000590499 ZNF76P36508 570 aa12.73□□□□□ -0.37
SMAD4-211ENST00000590499 ACTR2P61160 394 aa12.73□□□□□ -0.37
SMAD4-211ENST00000590499 SMAD3P84022 425 aaKnown RBP12.73□□□□□ -0.37
SMAD4-211ENST00000590499 SETQ01105 290 aaPredicted RBP12.73□□□□□ -0.37
SMAD4-211ENST00000590499 BLIDQ8IZY5 108 aa12.73□□□□□ -0.37
SMAD4-211ENST00000590499 CCDC155Q8N6L0 562 aa12.73□□□□□ -0.37
SMAD4-211ENST00000590499 NSUN7Q8NE18 718 aaKnown RBP12.73□□□□□ -0.37
SMAD4-211ENST00000590499 LMBR1Q8WVP7 490 aa12.73□□□□□ -0.37
SMAD4-211ENST00000590499 SDF4Q9BRK5 362 aa12.73□□□□□ -0.37
SMAD4-211ENST00000590499 C22orf23Q9BZE7 217 aa12.73□□□□□ -0.37
SMAD4-211ENST00000590499 RNPEPQ9H4A4 650 aa12.73□□□□□ -0.37
SMAD4-211ENST00000590499 CXXC1Q9P0U4 656 aaPredicted RBP12.73□□□□□ -0.37
SMAD4-211ENST00000590499 KCNJ14Q9UNX9 436 aa12.73□□□□□ -0.37
SMAD4-211ENST00000590499 PTPRSQ13332 1948 aa12.72□□□□□ -0.37
SMAD4-211ENST00000590499 SIP14410 1827 aa12.72□□□□□ -0.37
SMAD4-211ENST00000590499 MYO9BQ13459 2157 aa12.72□□□□□ -0.37
SMAD4-211ENST00000590499 IGKV6D-21A0A0A0MT36 114 aa12.72□□□□□ -0.37
SMAD4-211ENST00000590499 C17orf102A2RUQ5 167 aa12.72□□□□□ -0.37
SMAD4-211ENST00000590499 IPO5O00410 1097 aaKnown RBP12.72□□□□□ -0.37
SMAD4-211ENST00000590499 TREHO43280 583 aa12.72□□□□□ -0.37
SMAD4-211ENST00000590499 FGBP02675 491 aa12.72□□□□□ -0.37
SMAD4-211ENST00000590499 SELPP16109 830 aa12.72□□□□□ -0.37
SMAD4-211ENST00000590499 USP11P51784 963 aa12.72□□□□□ -0.37
SMAD4-211ENST00000590499 FAM109BQ6ICB4 259 aaPredicted RBP12.72□□□□□ -0.37
SMAD4-211ENST00000590499 LRRC8DQ7L1W4 858 aa12.72□□□□□ -0.37
SMAD4-211ENST00000590499 RPUSD2Q8IZ73 545 aaKnown RBP12.72□□□□□ -0.37
SMAD4-211ENST00000590499 RETREG2Q8NC44 543 aa12.72□□□□□ -0.37
SMAD4-211ENST00000590499 TBCKQ8TEA7 893 aa12.72□□□□□ -0.37
SMAD4-211ENST00000590499 SPIRE2Q8WWL2 714 aa12.72□□□□□ -0.37
SMAD4-211ENST00000590499 SYMPKQ92797 1274 aaKnown RBP12.72□□□□□ -0.37
SMAD4-211ENST00000590499 MRGPRX2Q96LB1 330 aa12.72□□□□□ -0.37
SMAD4-211ENST00000590499 SMARCAD1Q9H4L7 1026 aa12.72□□□□□ -0.37
SMAD4-211ENST00000590499 GJB4Q9NTQ9 266 aa12.72□□□□□ -0.37
SMAD4-211ENST00000590499 SETD4Q9NVD3 440 aa12.72□□□□□ -0.37
SMAD4-211ENST00000590499 ERAP1Q9NZ08 941 aa12.72□□□□□ -0.37
SMAD4-211ENST00000590499 ORC3Q9UBD5 711 aaPredicted RBP12.72□□□□□ -0.37
SMAD4-211ENST00000590499 NRCAMQ92823 1304 aa12.71□□□□□ -0.37
SMAD4-211ENST00000590499 CYP3A7-CYP3A51PA0A087WV96 503 aa12.71□□□□□ -0.37
SMAD4-211ENST00000590499 JAK2O60674 1132 aa12.71□□□□□ -0.37
SMAD4-211ENST00000590499 DXOO77932 396 aaKnown RBP12.71□□□□□ -0.37
SMAD4-211ENST00000590499 CXCL10P02778 98 aa12.71□□□□□ -0.37
SMAD4-211ENST00000590499 CYP3A7P24462 503 aa12.71□□□□□ -0.37
SMAD4-211ENST00000590499 MBTPS1Q14703 1052 aa12.71□□□□□ -0.37
SMAD4-211ENST00000590499 PRR16Q569H4 304 aa12.71□□□□□ -0.37
SMAD4-211ENST00000590499 ZNF618Q5T7W0 954 aa12.71□□□□□ -0.37
SMAD4-211ENST00000590499 ABHD15Q6UXT9 468 aa12.71□□□□□ -0.37
SMAD4-211ENST00000590499 Q7L0L9 218 aa12.71□□□□□ -0.37
SMAD4-211ENST00000590499 OTOP2Q7RTS6 562 aa12.71□□□□□ -0.37
SMAD4-211ENST00000590499 ATP6V0A1Q93050 837 aa12.71□□□□□ -0.37
SMAD4-211ENST00000590499 MBOAT7Q96N66 472 aa12.71□□□□□ -0.37
SMAD4-211ENST00000590499 ZNF577Q9BSK1 485 aa12.71□□□□□ -0.37
SMAD4-211ENST00000590499 LIMCH1Q9UPQ0 1083 aa12.71□□□□□ -0.37
SMAD4-211ENST00000590499 PRUNE2Q8WUY3 3088 aa12.7□□□□□ -0.38
SMAD4-211ENST00000590499 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.7□□□□□ -0.38
SMAD4-211ENST00000590499 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.7□□□□□ -0.38
SMAD4-211ENST00000590499 MBLAC1A4D2B0 266 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms