RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 IGSF9BQ9UPX0 1349 aa7.1□□□□□ -1.27
VPS25-204ENST00000589577 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.1□□□□□ -1.27
VPS25-204ENST00000589577 MBLAC1A4D2B0 266 aaPredicted RBP7.1□□□□□ -1.27
VPS25-204ENST00000589577 APPP05067 770 aa7.1□□□□□ -1.27
VPS25-204ENST00000589577 FGFR1P11362 822 aa7.1□□□□□ -1.27
VPS25-204ENST00000589577 RLBP1P12271 317 aa7.1□□□□□ -1.27
VPS25-204ENST00000589577 SARSP49591 514 aaKnown RBP7.1□□□□□ -1.27
VPS25-204ENST00000589577 HSD17B4P51659 736 aa7.1□□□□□ -1.27
VPS25-204ENST00000589577 MRPS6P82932 125 aaKnown RBP7.1□□□□□ -1.27
VPS25-204ENST00000589577 GHRHRQ02643 423 aa7.1□□□□□ -1.27
VPS25-204ENST00000589577 CTDSPL2Q05D32 466 aa7.1□□□□□ -1.27
VPS25-204ENST00000589577 SEMA3FQ13275 785 aa7.1□□□□□ -1.27
VPS25-204ENST00000589577 CDC37Q16543 378 aaPredicted RBP7.1□□□□□ -1.27
VPS25-204ENST00000589577 PPP4R3BQ5MIZ7 849 aa7.1□□□□□ -1.27
VPS25-204ENST00000589577 ATAT1Q5SQI0 421 aa7.1□□□□□ -1.27
VPS25-204ENST00000589577 N4BP2L1Q5TBK1 243 aaPredicted RBP7.1□□□□□ -1.27
VPS25-204ENST00000589577 KCNV1Q6PIU1 500 aa7.1□□□□□ -1.27
VPS25-204ENST00000589577 TMC5Q6UXY8 1006 aa7.1□□□□□ -1.27
VPS25-204ENST00000589577 OTOP3Q7RTS5 596 aa7.1□□□□□ -1.27
VPS25-204ENST00000589577 VSIG10LQ86VR7 867 aa7.1□□□□□ -1.27
VPS25-204ENST00000589577 SLC44A3Q8N4M1 653 aa7.1□□□□□ -1.27
VPS25-204ENST00000589577 NETO1Q8TDF5 533 aa7.1□□□□□ -1.27
VPS25-204ENST00000589577 SLC22A17Q8WUG5 538 aa7.1□□□□□ -1.27
VPS25-204ENST00000589577 USP26Q9BXU7 913 aa7.1□□□□□ -1.27
VPS25-204ENST00000589577 MLXIPQ9HAP2 919 aa7.1□□□□□ -1.27
VPS25-204ENST00000589577 IGSF9Q9P2J2 1179 aa7.1□□□□□ -1.27
VPS25-204ENST00000589577 PCDHGA2Q9Y5H1 932 aa7.1□□□□□ -1.27
VPS25-204ENST00000589577 TENM4Q6N022 2769 aa7.09□□□□□ -1.27
VPS25-204ENST00000589577 GREB1Q4ZG55 1949 aa7.09□□□□□ -1.27
VPS25-204ENST00000589577 CYSRT1A8MQ03 144 aa7.09□□□□□ -1.27
VPS25-204ENST00000589577 PATL2C9JE40 543 aaKnown RBP7.09□□□□□ -1.27
VPS25-204ENST00000589577 GDF9O60383 454 aa7.09□□□□□ -1.27
VPS25-204ENST00000589577 HMMRO75330 724 aa7.09□□□□□ -1.27
VPS25-204ENST00000589577 GOLGA8HP0CJ92 632 aa7.09□□□□□ -1.27
VPS25-204ENST00000589577 TGFB3P10600 412 aa7.09□□□□□ -1.27
VPS25-204ENST00000589577 TOP1P11387 765 aaKnown RBP7.09□□□□□ -1.27
VPS25-204ENST00000589577 SRFP11831 508 aa7.09□□□□□ -1.27
VPS25-204ENST00000589577 MYCLP12524 364 aaPredicted RBP7.09□□□□□ -1.27
VPS25-204ENST00000589577 LAG3P18627 525 aa7.09□□□□□ -1.27
VPS25-204ENST00000589577 GNAT2P19087 354 aa7.09□□□□□ -1.27
VPS25-204ENST00000589577 IBSPP21815 317 aaPredicted RBP7.09□□□□□ -1.27
VPS25-204ENST00000589577 SPEM2Q0P670 501 aa7.09□□□□□ -1.27
VPS25-204ENST00000589577 SMC1AQ14683 1233 aaKnown RBP7.09□□□□□ -1.27
VPS25-204ENST00000589577 PGM5Q15124 567 aa7.09□□□□□ -1.27
VPS25-204ENST00000589577 TMEM266Q2M3C6 531 aa7.09□□□□□ -1.27
VPS25-204ENST00000589577 ERICH6BQ5W0A0 696 aa7.09□□□□□ -1.27
VPS25-204ENST00000589577 KCNT2Q6UVM3 1135 aa7.09□□□□□ -1.27
VPS25-204ENST00000589577 LRSAM1Q6UWE0 723 aa7.09□□□□□ -1.27
VPS25-204ENST00000589577 CCDC149Q6ZUS6 474 aa7.09□□□□□ -1.27
VPS25-204ENST00000589577 TMC7Q7Z402 723 aa7.09□□□□□ -1.27
VPS25-204ENST00000589577 GPR149Q86SP6 731 aa7.09□□□□□ -1.27
VPS25-204ENST00000589577 PANK1Q8TE04 598 aa7.09□□□□□ -1.27
VPS25-204ENST00000589577 ACSF2Q96CM8 615 aaPredicted RBP7.09□□□□□ -1.27
VPS25-204ENST00000589577 KIF1BPQ96EK5 621 aa7.09□□□□□ -1.27
VPS25-204ENST00000589577 SEC62Q99442 399 aaKnown RBP7.09□□□□□ -1.27
VPS25-204ENST00000589577 TMEM121BQ9BXQ6 578 aaPredicted RBP7.09□□□□□ -1.27
VPS25-204ENST00000589577 UBA5Q9GZZ9 404 aa7.09□□□□□ -1.27
VPS25-204ENST00000589577 BCL11AQ9H165 835 aa7.09□□□□□ -1.27
VPS25-204ENST00000589577 ARHGEF3Q9NR81 526 aa7.09□□□□□ -1.27
VPS25-204ENST00000589577 RNF19AQ9NV58 838 aa7.09□□□□□ -1.27
VPS25-204ENST00000589577 DZANK1Q9NVP4 752 aa7.09□□□□□ -1.27
VPS25-204ENST00000589577 ZBTB47Q9UFB7 747 aaPredicted RBP7.09□□□□□ -1.27
VPS25-204ENST00000589577 TUBE1Q9UJT0 475 aa7.09□□□□□ -1.27
VPS25-204ENST00000589577 FBXO4Q9UKT5 387 aa7.09□□□□□ -1.27
VPS25-204ENST00000589577 LRFN2Q9ULH4 789 aa7.09□□□□□ -1.27
VPS25-204ENST00000589577 SQORQ9Y6N5 450 aa7.09□□□□□ -1.27
VPS25-204ENST00000589577 EVPLQ92817 2033 aa7.08□□□□□ -1.28
VPS25-204ENST00000589577 DOCK6Q96HP0 2047 aa7.08□□□□□ -1.28
VPS25-204ENST00000589577 C9IYK1 514 aa7.08□□□□□ -1.28
VPS25-204ENST00000589577 NOP56O00567 594 aaKnown RBP7.08□□□□□ -1.28
VPS25-204ENST00000589577 RNF113AO15541 343 aaKnown RBP7.08□□□□□ -1.28
VPS25-204ENST00000589577 RANBP6O60518 1105 aaKnown RBP7.08□□□□□ -1.28
VPS25-204ENST00000589577 CFBP00751 764 aa7.08□□□□□ -1.28
VPS25-204ENST00000589577 HSPD1P10809 573 aaKnown RBP7.08□□□□□ -1.28
VPS25-204ENST00000589577 RFX1P22670 979 aa7.08□□□□□ -1.28
VPS25-204ENST00000589577 CSTF1Q05048 431 aaKnown RBP7.08□□□□□ -1.28
VPS25-204ENST00000589577 RING1Q06587 406 aa7.08□□□□□ -1.28
VPS25-204ENST00000589577 TMEM62Q0P6H9 643 aa7.08□□□□□ -1.28
VPS25-204ENST00000589577 PAK2Q13177 524 aa7.08□□□□□ -1.28
VPS25-204ENST00000589577 WTAPQ15007 396 aa7.08□□□□□ -1.28
VPS25-204ENST00000589577 GRIK4Q16099 956 aa7.08□□□□□ -1.28
VPS25-204ENST00000589577 QRICH1Q2TAL8 776 aa7.08□□□□□ -1.28
VPS25-204ENST00000589577 HSP90AB4PQ58FF6 505 aa7.08□□□□□ -1.28
VPS25-204ENST00000589577 UTP14CQ5TAP6 766 aaKnown RBP7.08□□□□□ -1.28
VPS25-204ENST00000589577 TSSK4Q6SA08 328 aa7.08□□□□□ -1.28
VPS25-204ENST00000589577 METTL7BQ6UX53 244 aa7.08□□□□□ -1.28
VPS25-204ENST00000589577 UNQ6494/PRO21346Q6UXR6 183 aa7.08□□□□□ -1.28
VPS25-204ENST00000589577 STOX1Q6ZVD7 989 aa7.08□□□□□ -1.28
VPS25-204ENST00000589577 CYFIP1Q7L576 1253 aa7.08□□□□□ -1.28
VPS25-204ENST00000589577 KBTBD3Q8NAB2 608 aa7.08□□□□□ -1.28
VPS25-204ENST00000589577 KDF1Q8NAX2 398 aaPredicted RBP7.08□□□□□ -1.28
VPS25-204ENST00000589577 AUTS2Q8WXX7 1259 aa7.08□□□□□ -1.28
VPS25-204ENST00000589577 SECISBP2LQ93073 1101 aaKnown RBP7.08□□□□□ -1.28
VPS25-204ENST00000589577 BORCS6Q96GS4 357 aa7.08□□□□□ -1.28
VPS25-204ENST00000589577 ZSCAN32Q9NX65 697 aa7.08□□□□□ -1.28
VPS25-204ENST00000589577 PUF60Q9UHX1 559 aaKnown RBP7.08□□□□□ -1.28
VPS25-204ENST00000589577 ZNF215Q9UL58 517 aaPredicted RBP7.08□□□□□ -1.28
VPS25-204ENST00000589577 MTF2Q9Y483 593 aaPredicted RBP7.08□□□□□ -1.28
VPS25-204ENST00000589577 PCDHB7Q9Y5E2 793 aa7.08□□□□□ -1.28
VPS25-204ENST00000589577 SRRM3A6NNA2 597 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms