RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 TRMT1LQ7Z2T5 733 aaKnown RBP23.76■■□□□ 1.39
R3HDM4-204ENST00000589428 PDILTQ8N807 584 aa23.76■■□□□ 1.39
R3HDM4-204ENST00000589428 CCSER1Q9C0I3 900 aa23.76■■□□□ 1.39
R3HDM4-204ENST00000589428 TRIM43BA6NCK2 446 aa23.76■■□□□ 1.39
R3HDM4-204ENST00000589428 RRN3P2A6NIE6 340 aa23.76■■□□□ 1.39
R3HDM4-204ENST00000589428 ZNF202O95125 648 aa23.76■■□□□ 1.39
R3HDM4-204ENST00000589428 OATP04181 439 aa23.76■■□□□ 1.39
R3HDM4-204ENST00000589428 RAG1P15918 1043 aa23.76■■□□□ 1.39
R3HDM4-204ENST00000589428 TXLNAP40222 546 aa23.76■■□□□ 1.39
R3HDM4-204ENST00000589428 QARSP47897 775 aaKnown RBP23.76■■□□□ 1.39
R3HDM4-204ENST00000589428 IGBP1P78318 339 aa23.76■■□□□ 1.39
R3HDM4-204ENST00000589428 KARSQ15046 597 aaKnown RBP23.76■■□□□ 1.39
R3HDM4-204ENST00000589428 CABP7Q86V35 215 aa23.76■■□□□ 1.39
R3HDM4-204ENST00000589428 CCDC155Q8N6L0 562 aa23.76■■□□□ 1.39
R3HDM4-204ENST00000589428 NEK9Q8TD19 979 aa23.76■■□□□ 1.39
R3HDM4-204ENST00000589428 TRIM43Q96BQ3 446 aaPredicted RBP23.76■■□□□ 1.39
R3HDM4-204ENST00000589428 PANK2Q9BZ23 570 aa23.76■■□□□ 1.39
R3HDM4-204ENST00000589428 HIPK3Q9H422 1215 aa23.76■■□□□ 1.39
R3HDM4-204ENST00000589428 WDR81Q562E7 1941 aa23.75■■□□□ 1.39
R3HDM4-204ENST00000589428 H0YGN5 161 aa23.75■■□□□ 1.39
R3HDM4-204ENST00000589428 POLR2DO15514 142 aaKnown RBP23.75■■□□□ 1.39
R3HDM4-204ENST00000589428 ZNF862O60290 1169 aa23.75■■□□□ 1.39
R3HDM4-204ENST00000589428 ATP4AP20648 1035 aa23.75■■□□□ 1.39
R3HDM4-204ENST00000589428 ZNF200P98182 395 aaPredicted RBP23.75■■□□□ 1.39
R3HDM4-204ENST00000589428 HIC1Q14526 733 aa23.75■■□□□ 1.39
R3HDM4-204ENST00000589428 ERMNQ8TAM6 284 aa23.75■■□□□ 1.39
R3HDM4-204ENST00000589428 LXNQ9BS40 222 aa23.75■■□□□ 1.39
R3HDM4-204ENST00000589428 PPP1R12CQ9BZL4 782 aa23.75■■□□□ 1.39
R3HDM4-204ENST00000589428 NRBP2Q9NSY0 501 aa23.75■■□□□ 1.39
R3HDM4-204ENST00000589428 DDX19AQ9NUU7 478 aaKnown RBP23.75■■□□□ 1.39
R3HDM4-204ENST00000589428 TUBE1Q9UJT0 475 aa23.75■■□□□ 1.39
R3HDM4-204ENST00000589428 KAT6AQ92794 2004 aa23.74■■□□□ 1.39
R3HDM4-204ENST00000589428 COL1A2P08123 1366 aa23.74■■□□□ 1.39
R3HDM4-204ENST00000589428 KINO60870 393 aaKnown RBP23.74■■□□□ 1.39
R3HDM4-204ENST00000589428 CYP4A11Q02928 519 aa23.74■■□□□ 1.39
R3HDM4-204ENST00000589428 PTK7Q13308 1070 aa23.74■■□□□ 1.39
R3HDM4-204ENST00000589428 SNX29Q8TEQ0 813 aa23.74■■□□□ 1.39
R3HDM4-204ENST00000589428 DYDC2Q96IM9 177 aa23.74■■□□□ 1.39
R3HDM4-204ENST00000589428 EIF2AK1Q9BQI3 630 aaKnown RBP23.74■■□□□ 1.39
R3HDM4-204ENST00000589428 TREHO43280 583 aa23.73■■□□□ 1.39
R3HDM4-204ENST00000589428 BFSP2Q13515 415 aa23.73■■□□□ 1.39
R3HDM4-204ENST00000589428 XKR3Q5GH77 459 aa23.73■■□□□ 1.39
R3HDM4-204ENST00000589428 ZNF484Q5JVG2 852 aa23.73■■□□□ 1.39
R3HDM4-204ENST00000589428 KRT79Q5XKE5 535 aa23.73■■□□□ 1.39
R3HDM4-204ENST00000589428 CAGE1Q8TC20 777 aa23.73■■□□□ 1.39
R3HDM4-204ENST00000589428 CTAGE1Q96RT6 745 aa23.73■■□□□ 1.39
R3HDM4-204ENST00000589428 LBHD1Q9BQE6 289 aaPredicted RBP23.73■■□□□ 1.39
R3HDM4-204ENST00000589428 NOC4LQ9BVI4 516 aaKnown RBP23.73■■□□□ 1.39
R3HDM4-204ENST00000589428 RGL1Q9NZL6 768 aa23.73■■□□□ 1.39
R3HDM4-204ENST00000589428 SEPT9Q9UHD8 586 aaPredicted RBP23.73■■□□□ 1.39
R3HDM4-204ENST00000589428 E2F4Q16254 413 aa23.73■■□□□ 1.39
R3HDM4-204ENST00000589428 HAUS3Q68CZ6 603 aa23.73■■□□□ 1.39
R3HDM4-204ENST00000589428 SERINC5Q86VE9 423 aa23.73■■□□□ 1.39
R3HDM4-204ENST00000589428 CLSTN2Q9H4D0 955 aa23.73■■□□□ 1.39
R3HDM4-204ENST00000589428 ZSWIM4Q9H7M6 989 aa23.73■■□□□ 1.39
R3HDM4-204ENST00000589428 TIMP1P01033 207 aa23.72■■□□□ 1.39
R3HDM4-204ENST00000589428 ADAM17P78536 824 aa23.72■■□□□ 1.39
R3HDM4-204ENST00000589428 CTTNQ14247 550 aaKnown RBP23.72■■□□□ 1.39
R3HDM4-204ENST00000589428 ZRSR1Q15695 479 aaKnown RBP23.72■■□□□ 1.39
R3HDM4-204ENST00000589428 LONRF3Q496Y0 759 aa23.72■■□□□ 1.39
R3HDM4-204ENST00000589428 RASSF8Q8NHQ8 419 aa23.72■■□□□ 1.39
R3HDM4-204ENST00000589428 TRAPPC12Q8WVT3 735 aa23.72■■□□□ 1.39
R3HDM4-204ENST00000589428 DHX58Q96C10 678 aa23.72■■□□□ 1.39
R3HDM4-204ENST00000589428 CEP290O15078 2479 aa23.71■■□□□ 1.39
R3HDM4-204ENST00000589428 LTBP2Q14767 1821 aa23.71■■□□□ 1.39
R3HDM4-204ENST00000589428 ACTN4O43707 911 aaKnown RBP23.71■■□□□ 1.39
R3HDM4-204ENST00000589428 GRB10Q13322 594 aa23.71■■□□□ 1.39
R3HDM4-204ENST00000589428 CCDC183Q5T5S1 534 aa23.71■■□□□ 1.39
R3HDM4-204ENST00000589428 TAF2Q6P1X5 1199 aa23.71■■□□□ 1.39
R3HDM4-204ENST00000589428 TPH2Q8IWU9 490 aa23.71■■□□□ 1.39
R3HDM4-204ENST00000589428 C4orf19Q8IY42 314 aa23.71■■□□□ 1.39
R3HDM4-204ENST00000589428 LRRC15Q8TF66 581 aa23.71■■□□□ 1.39
R3HDM4-204ENST00000589428 SYAP1Q96A49 352 aaPredicted RBP23.71■■□□□ 1.39
R3HDM4-204ENST00000589428 PLIN2Q99541 437 aa23.71■■□□□ 1.39
R3HDM4-204ENST00000589428 NUP62CLQ9H1M0 184 aa23.71■■□□□ 1.39
R3HDM4-204ENST00000589428 STK24Q9Y6E0 443 aa23.71■■□□□ 1.39
R3HDM4-204ENST00000589428 TRIP12Q14669 1992 aaPredicted RBP23.71■■□□□ 1.39
R3HDM4-204ENST00000589428 MBLAC1A4D2B0 266 aaPredicted RBP23.7■■□□□ 1.39
R3HDM4-204ENST00000589428 PITPNM1O00562 1244 aa23.7■■□□□ 1.39
R3HDM4-204ENST00000589428 PLCG1P19174 1290 aa23.7■■□□□ 1.39
R3HDM4-204ENST00000589428 NAALADL2Q58DX5 795 aa23.7■■□□□ 1.39
R3HDM4-204ENST00000589428 KRBA2Q6ZNG9 492 aa23.7■■□□□ 1.39
R3HDM4-204ENST00000589428 RETREG2Q8NC44 543 aa23.7■■□□□ 1.39
R3HDM4-204ENST00000589428 TIGD1Q96MW7 591 aa23.7■■□□□ 1.39
R3HDM4-204ENST00000589428 PNMA5Q96PV4 448 aa23.7■■□□□ 1.39
R3HDM4-204ENST00000589428 HSD17B14Q9BPX1 270 aa23.7■■□□□ 1.39
R3HDM4-204ENST00000589428 CCDC39Q9UFE4 941 aa23.7■■□□□ 1.39
R3HDM4-204ENST00000589428 MED24O75448 989 aa23.7■■□□□ 1.38
R3HDM4-204ENST00000589428 SLITRK3O94933 977 aa23.7■■□□□ 1.38
R3HDM4-204ENST00000589428 ITGB8P26012 769 aa23.7■■□□□ 1.38
R3HDM4-204ENST00000589428 CYP2C18P33260 490 aa23.7■■□□□ 1.38
R3HDM4-204ENST00000589428 CCT6AP40227 531 aaKnown RBP23.7■■□□□ 1.38
R3HDM4-204ENST00000589428 CAMK4Q16566 473 aa23.7■■□□□ 1.38
R3HDM4-204ENST00000589428 ECM1Q16610 540 aa23.7■■□□□ 1.38
R3HDM4-204ENST00000589428 MARCH8Q5T0T0 291 aa23.7■■□□□ 1.38
R3HDM4-204ENST00000589428 IQUBQ8NA54 791 aa23.7■■□□□ 1.38
R3HDM4-204ENST00000589428 DHX38Q92620 1227 aaKnown RBP23.7■■□□□ 1.38
R3HDM4-204ENST00000589428 CALML4Q96GE6 196 aa23.7■■□□□ 1.38
R3HDM4-204ENST00000589428 GZF1Q9H116 711 aaPredicted RBP23.7■■□□□ 1.38
R3HDM4-204ENST00000589428 TUFT1Q9NNX1 390 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms