RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 TFAP4Q01664 338 aa9.73□□□□□ -0.85
DNMT1-219ENST00000589349 FAM47AQ5JRC9 791 aa9.73□□□□□ -0.85
DNMT1-219ENST00000589349 FAM83BQ5T0W9 1011 aa9.73□□□□□ -0.85
DNMT1-219ENST00000589349 GIMAP6Q6P9H5 292 aa9.73□□□□□ -0.85
DNMT1-219ENST00000589349 ATG4CQ96DT6 458 aa9.73□□□□□ -0.85
DNMT1-219ENST00000589349 KRT82Q9NSB4 513 aa9.73□□□□□ -0.85
DNMT1-219ENST00000589349 BTBD7Q9P203 1132 aa9.73□□□□□ -0.85
DNMT1-219ENST00000589349 GJD2Q9UKL4 321 aa9.73□□□□□ -0.85
DNMT1-219ENST00000589349 TMX2Q9Y320 296 aa9.73□□□□□ -0.85
DNMT1-219ENST00000589349 PTPRFP10586 1907 aa9.72□□□□□ -0.85
DNMT1-219ENST00000589349 SLC15A5A6NIM6 579 aa9.72□□□□□ -0.85
DNMT1-219ENST00000589349 TSPY2A6NKD2 308 aa9.72□□□□□ -0.85
DNMT1-219ENST00000589349 WDR46O15213 610 aaKnown RBP9.72□□□□□ -0.85
DNMT1-219ENST00000589349 ECEL1O95672 775 aa9.72□□□□□ -0.85
DNMT1-219ENST00000589349 ADH5P11766 374 aa9.72□□□□□ -0.85
DNMT1-219ENST00000589349 BMP3P12645 472 aa9.72□□□□□ -0.85
DNMT1-219ENST00000589349 ARNTP27540 789 aa9.72□□□□□ -0.85
DNMT1-219ENST00000589349 SOX4Q06945 474 aaPredicted RBP9.72□□□□□ -0.85
DNMT1-219ENST00000589349 PPARAQ07869 468 aa9.72□□□□□ -0.85
DNMT1-219ENST00000589349 CCL14Q16627 93 aa9.72□□□□□ -0.85
DNMT1-219ENST00000589349 SBK1Q52WX2 424 aa9.72□□□□□ -0.85
DNMT1-219ENST00000589349 KIAA1755Q5JYT7 1200 aa9.72□□□□□ -0.85
DNMT1-219ENST00000589349 ZMYM1Q5SVZ6 1142 aa9.72□□□□□ -0.85
DNMT1-219ENST00000589349 CHD1LQ86WJ1 897 aa9.72□□□□□ -0.85
DNMT1-219ENST00000589349 FAM20CQ8IXL6 584 aa9.72□□□□□ -0.85
DNMT1-219ENST00000589349 CPXCR1Q8N123 301 aa9.72□□□□□ -0.85
DNMT1-219ENST00000589349 LRRC47Q8N1G4 583 aaKnown RBP9.72□□□□□ -0.85
DNMT1-219ENST00000589349 TRIB2Q92519 343 aa9.72□□□□□ -0.85
DNMT1-219ENST00000589349 NUP88Q99567 741 aaPredicted RBP9.72□□□□□ -0.85
DNMT1-219ENST00000589349 APBA2Q99767 749 aa9.72□□□□□ -0.85
DNMT1-219ENST00000589349 SPATC1LQ9H0A9 340 aa9.72□□□□□ -0.85
DNMT1-219ENST00000589349 SLC5A4Q9NY91 659 aa9.72□□□□□ -0.85
DNMT1-219ENST00000589349 STOML1Q9UBI4 398 aa9.72□□□□□ -0.85
DNMT1-219ENST00000589349 RPTORQ8N122 1335 aa9.72□□□□□ -0.85
DNMT1-219ENST00000589349 SYNGAP1Q96PV0 1343 aa9.72□□□□□ -0.85
DNMT1-219ENST00000589349 CNMDO75829 334 aa9.71□□□□□ -0.86
DNMT1-219ENST00000589349 IGHDP01880 384 aa9.71□□□□□ -0.86
DNMT1-219ENST00000589349 MCMDC2Q4G0Z9 681 aa9.71□□□□□ -0.86
DNMT1-219ENST00000589349 NECAB2Q7Z6G3 386 aa9.71□□□□□ -0.86
DNMT1-219ENST00000589349 MB21D1Q8N884 522 aa9.71□□□□□ -0.86
DNMT1-219ENST00000589349 SHISA4Q96DD7 197 aa9.71□□□□□ -0.86
DNMT1-219ENST00000589349 PAWRQ96IZ0 340 aaKnown RBP9.71□□□□□ -0.86
DNMT1-219ENST00000589349 FAM227BQ96M60 508 aa9.71□□□□□ -0.86
DNMT1-219ENST00000589349 MMP19Q99542 508 aa9.71□□□□□ -0.86
DNMT1-219ENST00000589349 YIPF2Q9BWQ6 316 aa9.71□□□□□ -0.86
DNMT1-219ENST00000589349 MOV10L1Q9BXT6 1211 aaKnown RBP9.71□□□□□ -0.86
DNMT1-219ENST00000589349 KCNF1Q9H3M0 494 aa9.71□□□□□ -0.86
DNMT1-219ENST00000589349 EPB41L4AQ9HCS5 686 aaPredicted RBP9.71□□□□□ -0.86
DNMT1-219ENST00000589349 DIAPH3Q9NSV4 1193 aa9.71□□□□□ -0.86
DNMT1-219ENST00000589349 FBXO28Q9NVF7 368 aa9.71□□□□□ -0.86
DNMT1-219ENST00000589349 STX8Q9UNK0 236 aa9.71□□□□□ -0.86
DNMT1-219ENST00000589349 NR2E3Q9Y5X4 410 aa9.71□□□□□ -0.86
DNMT1-219ENST00000589349 BAZ2AQ9UIF9 1905 aaKnown RBP9.71□□□□□ -0.86
DNMT1-219ENST00000589349 LOC285556D6RIA3 1793 aa9.7□□□□□ -0.86
DNMT1-219ENST00000589349 MGAMO43451 1857 aa9.7□□□□□ -0.86
DNMT1-219ENST00000589349 F5H6K3 240 aa9.7□□□□□ -0.86
DNMT1-219ENST00000589349 H0YGN5 161 aa9.7□□□□□ -0.86
DNMT1-219ENST00000589349 ENC1O14682 589 aa9.7□□□□□ -0.86
DNMT1-219ENST00000589349 GSC2O15499 205 aa9.7□□□□□ -0.86
DNMT1-219ENST00000589349 ZBED4O75132 1171 aa9.7□□□□□ -0.86
DNMT1-219ENST00000589349 FBXO24O75426 580 aa9.7□□□□□ -0.86
DNMT1-219ENST00000589349 TTLL1O95922 423 aa9.7□□□□□ -0.86
DNMT1-219ENST00000589349 FCER1AP12319 257 aa9.7□□□□□ -0.86
DNMT1-219ENST00000589349 DRD2P14416 443 aa9.7□□□□□ -0.86
DNMT1-219ENST00000589349 ADORA2AP29274 412 aa9.7□□□□□ -0.86
DNMT1-219ENST00000589349 CCND3P30281 292 aaPredicted RBP9.7□□□□□ -0.86
DNMT1-219ENST00000589349 CYP2C19P33261 490 aa9.7□□□□□ -0.86
DNMT1-219ENST00000589349 STAT3P40763 770 aa9.7□□□□□ -0.86
DNMT1-219ENST00000589349 USP11P51784 963 aa9.7□□□□□ -0.86
DNMT1-219ENST00000589349 MFAP1P55081 439 aaKnown RBP9.7□□□□□ -0.86
DNMT1-219ENST00000589349 HAND2P61296 217 aa9.7□□□□□ -0.86
DNMT1-219ENST00000589349 KLRC3Q07444 240 aa9.7□□□□□ -0.86
DNMT1-219ENST00000589349 CACNB2Q08289 660 aaPredicted RBP9.7□□□□□ -0.86
DNMT1-219ENST00000589349 NMIQ13287 307 aaPredicted RBP9.7□□□□□ -0.86
DNMT1-219ENST00000589349 KCTD2Q14681 263 aa9.7□□□□□ -0.86
DNMT1-219ENST00000589349 PRSS36Q5K4E3 855 aa9.7□□□□□ -0.86
DNMT1-219ENST00000589349 SLFN13Q68D06 897 aa9.7□□□□□ -0.86
DNMT1-219ENST00000589349 LBX2Q6XYB7 198 aa9.7□□□□□ -0.86
DNMT1-219ENST00000589349 SV2BQ7L1I2 683 aa9.7□□□□□ -0.86
DNMT1-219ENST00000589349 PDZD3Q86UT5 571 aa9.7□□□□□ -0.86
DNMT1-219ENST00000589349 SIAH1Q8IUQ4 282 aa9.7□□□□□ -0.86
DNMT1-219ENST00000589349 KCNB2Q92953 911 aa9.7□□□□□ -0.86
DNMT1-219ENST00000589349 DDX11Q96FC9 970 aa9.7□□□□□ -0.86
DNMT1-219ENST00000589349 CEP95Q96GE4 821 aa9.7□□□□□ -0.86
DNMT1-219ENST00000589349 SLF1Q9BQI6 1058 aa9.7□□□□□ -0.86
DNMT1-219ENST00000589349 MROH8Q9H579 483 aa9.7□□□□□ -0.86
DNMT1-219ENST00000589349 CCDC86Q9H6F5 360 aaKnown RBP9.7□□□□□ -0.86
DNMT1-219ENST00000589349 INCENPQ9NQS7 918 aa9.7□□□□□ -0.86
DNMT1-219ENST00000589349 HELLSQ9NRZ9 838 aa9.7□□□□□ -0.86
DNMT1-219ENST00000589349 RNF19AQ9NV58 838 aa9.7□□□□□ -0.86
DNMT1-219ENST00000589349 STAP2Q9UGK3 403 aa9.7□□□□□ -0.86
DNMT1-219ENST00000589349 STRNO43815 780 aa9.69□□□□□ -0.86
DNMT1-219ENST00000589349 SLC25A27O95847 323 aa9.69□□□□□ -0.86
DNMT1-219ENST00000589349 NDUFB10O96000 172 aa9.69□□□□□ -0.86
DNMT1-219ENST00000589349 SLFN14P0C7P3 912 aa9.69□□□□□ -0.86
DNMT1-219ENST00000589349 NUCB1Q02818 461 aa9.69□□□□□ -0.86
DNMT1-219ENST00000589349 CCDC96Q2M329 555 aa9.69□□□□□ -0.86
DNMT1-219ENST00000589349 VPS53Q5VIR6 699 aa9.69□□□□□ -0.86
DNMT1-219ENST00000589349 ANO1Q5XXA6 986 aa9.69□□□□□ -0.86
DNMT1-219ENST00000589349 CWC27Q6UX04 472 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms