RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 TBC1D7Q9P0N9 293 aa7.84□□□□□ -1.15
SPIDR-228ENST00000588781 VAV3Q9UKW4 847 aa7.84□□□□□ -1.15
SPIDR-228ENST00000588781 HPCAL4Q9UM19 191 aa7.84□□□□□ -1.15
SPIDR-228ENST00000588781 PCDHGC5Q9Y5F6 944 aa7.84□□□□□ -1.15
SPIDR-228ENST00000588781 FRMPD4Q14CM0 1322 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 KIF13BQ9NQT8 1826 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 ARHGEF35A5YM69 484 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 ERICH4A6NGS2 130 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 CCDC188H7C350 402 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 EPHB6O15197 1021 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 P4HA2O15460 535 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 PPIP5K2O43314 1243 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 SRGAP2O75044 1071 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 NOL4O94818 638 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 GDF11O95390 407 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 PLEKP08567 350 aaPredicted RBP7.83□□□□□ -1.16
SPIDR-228ENST00000588781 H2AFZP0C0S5 128 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 SPATA31C1P0DKV0 1188 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 FDX1P10109 184 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 BCRP11274 1271 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 UCHL3P15374 230 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 ABCD1P33897 745 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 STAT3P40763 770 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 GFPT1Q06210 699 aaPredicted RBP7.83□□□□□ -1.16
SPIDR-228ENST00000588781 C2orf54Q08AI8 447 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 KIAA0753Q2KHM9 967 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 CEP55Q53EZ4 464 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 DCAF17Q5H9S7 520 aaPredicted RBP7.83□□□□□ -1.16
SPIDR-228ENST00000588781 MEI1Q5TIA1 1274 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 TCERG1LQ5VWI1 586 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 RINT1Q6NUQ1 792 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 RSBN1LQ6PCB5 846 aaPredicted RBP7.83□□□□□ -1.16
SPIDR-228ENST00000588781 H2AFVQ71UI9 128 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 FAM83AQ86UY5 434 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 SLC9A9Q8IVB4 645 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 ZFPM1Q8IX07 1006 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 FAM186BQ8IYM0 893 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 MYCT1Q8N699 235 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 FAM76AQ8TAV0 307 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 WHAMMQ8TF30 809 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 AENQ8WTP8 325 aaKnown RBP7.83□□□□□ -1.16
SPIDR-228ENST00000588781 LENG9Q96B70 501 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 EEF2KMTQ96G04 330 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 DRC1Q96MC2 740 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 DEFB129Q9H1M3 183 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 BHMT2Q9H2M3 363 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 RANBP17Q9H2T7 1088 aaKnown RBP7.83□□□□□ -1.16
SPIDR-228ENST00000588781 TDRD3Q9H7E2 651 aaKnown RBP7.83□□□□□ -1.16
SPIDR-228ENST00000588781 TMEM206Q9H813 350 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 VCPKMTQ9H867 229 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 ST7Q9NRC1 585 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 CAPN6Q9Y6Q1 641 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 LOXHD1Q8IVV2 1947 aa7.83□□□□□ -1.16
SPIDR-228ENST00000588781 COL11A2P13942 1736 aaPredicted RBP7.83□□□□□ -1.16
SPIDR-228ENST00000588781 NPHP3-ACAD11A0A0J9YXS1 232 aa7.82□□□□□ -1.16
SPIDR-228ENST00000588781 FAM86B1E9PN63 330 aa7.82□□□□□ -1.16
SPIDR-228ENST00000588781 H3BQF6 201 aa7.82□□□□□ -1.16
SPIDR-228ENST00000588781 MAPK13O15264 365 aa7.82□□□□□ -1.16
SPIDR-228ENST00000588781 DKC1O60832 514 aaKnown RBP eCLIP7.82□□□□□ -1.16
SPIDR-228ENST00000588781 RNF40O75150 1001 aa7.82□□□□□ -1.16
SPIDR-228ENST00000588781 PALMO75781 387 aa7.82□□□□□ -1.16
SPIDR-228ENST00000588781 PSMD10O75832 226 aa7.82□□□□□ -1.16
SPIDR-228ENST00000588781 PRPF6O94906 941 aaKnown RBP7.82□□□□□ -1.16
SPIDR-228ENST00000588781 CFBP00751 764 aa7.82□□□□□ -1.16
SPIDR-228ENST00000588781 VIL1P09327 827 aaKnown RBP7.82□□□□□ -1.16
SPIDR-228ENST00000588781 FAM86B2P0C5J1 330 aa7.82□□□□□ -1.16
SPIDR-228ENST00000588781 CAPN2P17655 700 aa7.82□□□□□ -1.16
SPIDR-228ENST00000588781 GUCY2CP25092 1073 aa7.82□□□□□ -1.16
SPIDR-228ENST00000588781 NOP2P46087 812 aaKnown RBP7.82□□□□□ -1.16
SPIDR-228ENST00000588781 CUL1Q13616 776 aa7.82□□□□□ -1.16
SPIDR-228ENST00000588781 ZSCAN26Q16670 478 aa7.82□□□□□ -1.16
SPIDR-228ENST00000588781 NFRKBQ6P4R8 1299 aa7.82□□□□□ -1.16
SPIDR-228ENST00000588781 SND1Q7KZF4 910 aaKnown RBP eCLIP7.82□□□□□ -1.16
SPIDR-228ENST00000588781 SH3BP5LQ7L8J4 393 aa7.82□□□□□ -1.16
SPIDR-228ENST00000588781 OTOP1Q7RTM1 612 aa7.82□□□□□ -1.16
SPIDR-228ENST00000588781 SIAH1Q8IUQ4 282 aa7.82□□□□□ -1.16
SPIDR-228ENST00000588781 TPH2Q8IWU9 490 aa7.82□□□□□ -1.16
SPIDR-228ENST00000588781 FAM178BQ8IXR5 827 aa7.82□□□□□ -1.16
SPIDR-228ENST00000588781 FAM133AQ8N9E0 248 aa7.82□□□□□ -1.16
SPIDR-228ENST00000588781 MTMR14Q8NCE2 650 aa7.82□□□□□ -1.16
SPIDR-228ENST00000588781 CCDC26Q8TAB7 109 aa7.82□□□□□ -1.16
SPIDR-228ENST00000588781 LRRC45Q96CN5 670 aa7.82□□□□□ -1.16
SPIDR-228ENST00000588781 CCDC43Q96MW1 224 aaKnown RBP7.82□□□□□ -1.16
SPIDR-228ENST00000588781 PSMD1Q99460 953 aa7.82□□□□□ -1.16
SPIDR-228ENST00000588781 HSD17B14Q9BPX1 270 aa7.82□□□□□ -1.16
SPIDR-228ENST00000588781 ZNF577Q9BSK1 485 aa7.82□□□□□ -1.16
SPIDR-228ENST00000588781 TLR10Q9BXR5 811 aa7.82□□□□□ -1.16
SPIDR-228ENST00000588781 STK33Q9BYT3 514 aa7.82□□□□□ -1.16
SPIDR-228ENST00000588781 MAF1Q9H063 256 aa7.82□□□□□ -1.16
SPIDR-228ENST00000588781 GCNT4Q9P109 453 aa7.82□□□□□ -1.16
SPIDR-228ENST00000588781 LARSQ9P2J5 1176 aaKnown RBP7.82□□□□□ -1.16
SPIDR-228ENST00000588781 KCNG1Q9UIX4 513 aa7.82□□□□□ -1.16
SPIDR-228ENST00000588781 ZBTB21Q9ULJ3 1066 aa7.82□□□□□ -1.16
SPIDR-228ENST00000588781 EXOC7Q9UPT5 735 aa7.82□□□□□ -1.16
SPIDR-228ENST00000588781 FAN1Q9Y2M0 1017 aa7.82□□□□□ -1.16
SPIDR-228ENST00000588781 CTDP1Q9Y5B0 961 aaPredicted RBP7.82□□□□□ -1.16
SPIDR-228ENST00000588781 DUSP10Q9Y6W6 482 aa7.82□□□□□ -1.16
SPIDR-228ENST00000588781 SIPA1L1O43166 1804 aa7.82□□□□□ -1.16
SPIDR-228ENST00000588781 IGLV3-22A0A075B6J6 115 aa7.81□□□□□ -1.16
SPIDR-228ENST00000588781 GOLGA6CA6NDK9 693 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms