RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 CDC42EP1Q00587 391 aa11.51□□□□□ -0.57
CLPTM1-207ENST00000587537 PTPN11Q06124 597 aaPredicted RBP11.51□□□□□ -0.57
CLPTM1-207ENST00000587537 KCNB1Q14721 858 aa11.51□□□□□ -0.57
CLPTM1-207ENST00000587537 XKR9Q5GH70 373 aa11.51□□□□□ -0.57
CLPTM1-207ENST00000587537 NT5DC1Q5TFE4 455 aa11.51□□□□□ -0.57
CLPTM1-207ENST00000587537 CAVIN1Q6NZI2 390 aaKnown RBP11.51□□□□□ -0.57
CLPTM1-207ENST00000587537 RETREG2Q8NC44 543 aa11.51□□□□□ -0.57
CLPTM1-207ENST00000587537 SLC7A3Q8WY07 619 aa11.51□□□□□ -0.57
CLPTM1-207ENST00000587537 CEP170P1Q96L14 293 aa11.51□□□□□ -0.57
CLPTM1-207ENST00000587537 DRC1Q96MC2 740 aa11.51□□□□□ -0.57
CLPTM1-207ENST00000587537 PCYT2Q99447 389 aa11.51□□□□□ -0.57
CLPTM1-207ENST00000587537 C16orf70Q9BSU1 422 aa11.51□□□□□ -0.57
CLPTM1-207ENST00000587537 PANK2Q9BZ23 570 aa11.51□□□□□ -0.57
CLPTM1-207ENST00000587537 TRIM9Q9C026 710 aa11.51□□□□□ -0.57
CLPTM1-207ENST00000587537 BHMT2Q9H2M3 363 aa11.51□□□□□ -0.57
CLPTM1-207ENST00000587537 CYP26B1Q9NR63 512 aa11.51□□□□□ -0.57
CLPTM1-207ENST00000587537 SEL1LQ9UBV2 794 aa11.51□□□□□ -0.57
CLPTM1-207ENST00000587537 KAT6AQ92794 2004 aa11.51□□□□□ -0.57
CLPTM1-207ENST00000587537 PHLPP2Q6ZVD8 1323 aa11.51□□□□□ -0.57
CLPTM1-207ENST00000587537 NRCAMQ92823 1304 aa11.51□□□□□ -0.57
CLPTM1-207ENST00000587537 KBTBD13C9JR72 458 aa11.5□□□□□ -0.57
CLPTM1-207ENST00000587537 E9PMD0 336 aa11.5□□□□□ -0.57
CLPTM1-207ENST00000587537 H0YCG3 227 aa11.5□□□□□ -0.57
CLPTM1-207ENST00000587537 ZNF862O60290 1169 aa11.5□□□□□ -0.57
CLPTM1-207ENST00000587537 KIF20AO95235 890 aa11.5□□□□□ -0.57
CLPTM1-207ENST00000587537 KRT18P05783 430 aaKnown RBP11.5□□□□□ -0.57
CLPTM1-207ENST00000587537 GAP43P17677 238 aa11.5□□□□□ -0.57
CLPTM1-207ENST00000587537 RTP1P59025 263 aa11.5□□□□□ -0.57
CLPTM1-207ENST00000587537 PURAQ00577 322 aaKnown RBP11.5□□□□□ -0.57
CLPTM1-207ENST00000587537 MDM2Q00987 491 aaPredicted RBP11.5□□□□□ -0.57
CLPTM1-207ENST00000587537 TRIM32Q13049 653 aa11.5□□□□□ -0.57
CLPTM1-207ENST00000587537 PSMD2Q13200 908 aa11.5□□□□□ -0.57
CLPTM1-207ENST00000587537 ECM1Q16610 540 aa11.5□□□□□ -0.57
CLPTM1-207ENST00000587537 UGCGQ16739 394 aa11.5□□□□□ -0.57
CLPTM1-207ENST00000587537 CT47A1Q5JQC4 288 aaPredicted RBP11.5□□□□□ -0.57
CLPTM1-207ENST00000587537 UTP14CQ5TAP6 766 aaKnown RBP11.5□□□□□ -0.57
CLPTM1-207ENST00000587537 ANO5Q75V66 913 aa11.5□□□□□ -0.57
CLPTM1-207ENST00000587537 SESTD1Q86VW0 696 aa11.5□□□□□ -0.57
CLPTM1-207ENST00000587537 GPBP1Q86WP2 473 aa11.5□□□□□ -0.57
CLPTM1-207ENST00000587537 CCDC65Q8IXS2 484 aa11.5□□□□□ -0.57
CLPTM1-207ENST00000587537 ANKLE1Q8NAG6 615 aa11.5□□□□□ -0.57
CLPTM1-207ENST00000587537 SPATA20Q8TB22 786 aa11.5□□□□□ -0.57
CLPTM1-207ENST00000587537 TCP11Q8WWU5 503 aa11.5□□□□□ -0.57
CLPTM1-207ENST00000587537 KIFAP3Q92845 792 aa11.5□□□□□ -0.57
CLPTM1-207ENST00000587537 SMARCE1Q969G3 411 aa11.5□□□□□ -0.57
CLPTM1-207ENST00000587537 ZNF333Q96JL9 665 aa11.5□□□□□ -0.57
CLPTM1-207ENST00000587537 BCAS3Q9H6U6 928 aa11.5□□□□□ -0.57
CLPTM1-207ENST00000587537 ATP6V0A4Q9HBG4 840 aa11.5□□□□□ -0.57
CLPTM1-207ENST00000587537 KIAA1468Q9P260 1216 aa11.5□□□□□ -0.57
CLPTM1-207ENST00000587537 SEPT9Q9UHD8 586 aaPredicted RBP11.5□□□□□ -0.57
CLPTM1-207ENST00000587537 TRPC6Q9Y210 931 aa11.5□□□□□ -0.57
CLPTM1-207ENST00000587537 COL4A3BPQ9Y5P4 624 aa11.5□□□□□ -0.57
CLPTM1-207ENST00000587537 SCN10AQ9Y5Y9 1956 aa11.5□□□□□ -0.57
CLPTM1-207ENST00000587537 HAS3O00219 553 aa11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 DNM1LO00429 736 aa11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 TBCAO75347 108 aaKnown RBP11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 STBD1O95210 358 aa11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 SSBP05455 408 aaKnown RBP eCLIP11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 GJB1P08034 283 aa11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 CCL5P13501 91 aa11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 CYP11B2P19099 503 aa11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 TMOD1P28289 359 aa11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 DNM2P50570 870 aa11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 TBC1D8BQ0IIM8 1120 aa11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 DPYDQ12882 1025 aa11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 MCM6Q14566 821 aa11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 MFSD10Q14728 455 aa11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 PLCB4Q15147 1175 aa11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 PPP2R5AQ15172 486 aa11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 TARBP2Q15633 366 aaKnown RBP11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 TPRNQ4KMQ1 711 aa11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 GJC2Q5T442 439 aaPredicted RBP11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 LHX8Q68G74 356 aa11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 RINT1Q6NUQ1 792 aa11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 NFRKBQ6P4R8 1299 aa11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 PADI6Q6TGC4 694 aa11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 FAM43BQ6ZT52 329 aaPredicted RBP11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 STXBP4Q6ZWJ1 553 aa11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 C1orf186Q6ZWK4 172 aa11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 UNC13DQ70J99 1090 aa11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 PIGOQ8TEQ8 1089 aa11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 SH3TC2Q8TF17 1288 aa11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 DDX12PQ92771 950 aa11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 RNF208Q9H0X6 261 aa11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 DHX33Q9H6R0 707 aaKnown RBP11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 LARSQ9P2J5 1176 aaKnown RBP11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 WRAP73Q9P2S5 460 aaPredicted RBP11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 DACH1Q9UI36 760 aa11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 TUBE1Q9UJT0 475 aa11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 OGDHLQ9ULD0 1010 aa11.49□□□□□ -0.57
CLPTM1-207ENST00000587537 FRMD3A2A2Y4 597 aa11.48□□□□□ -0.57
CLPTM1-207ENST00000587537 ASAP2O43150 1006 aa11.48□□□□□ -0.57
CLPTM1-207ENST00000587537 SORBS3O60504 671 aa11.48□□□□□ -0.57
CLPTM1-207ENST00000587537 MAFO75444 373 aaPredicted RBP11.48□□□□□ -0.57
CLPTM1-207ENST00000587537 MYCNP04198 464 aaPredicted RBP11.48□□□□□ -0.57
CLPTM1-207ENST00000587537 MYL3P08590 195 aa11.48□□□□□ -0.57
CLPTM1-207ENST00000587537 MAPTP10636 758 aaKnown RBP11.48□□□□□ -0.57
CLPTM1-207ENST00000587537 ATP4AP20648 1035 aa11.48□□□□□ -0.57
CLPTM1-207ENST00000587537 AFMP43652 599 aa11.48□□□□□ -0.57
CLPTM1-207ENST00000587537 PSEN2P49810 448 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms