RNA–Protein interactions for RNA: ENST00000586900.1

PKN1-208, Transcript of protein kinase N1, human

TSL 3

Gene PKN1, Length 550 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKN1-208	ENST00000586900	UBA7	P41226	1012 aa		13.78	□□□□□ -0.2
PKN1-208	ENST00000586900	GRIN1	Q05586	938 aa		13.78	□□□□□ -0.2
PKN1-208	ENST00000586900	MTHFD1L	Q6UB35	978 aa		13.78	□□□□□ -0.2
PKN1-208	ENST00000586900	C7orf61	Q8IZ16	206 aa		13.78	□□□□□ -0.2
PKN1-208	ENST00000586900	CCDC155	Q8N6L0	562 aa		13.78	□□□□□ -0.2
PKN1-208	ENST00000586900	CEP89	Q96ST8	783 aa		13.78	□□□□□ -0.2
PKN1-208	ENST00000586900	JPH2	Q9BR39	696 aa	Predicted RBP	13.78	□□□□□ -0.2
PKN1-208	ENST00000586900	CCSER1	Q9C0I3	900 aa		13.78	□□□□□ -0.2
PKN1-208	ENST00000586900	NT5C3A	Q9H0P0	336 aa		13.78	□□□□□ -0.2
PKN1-208	ENST00000586900	CSRNP2	Q9H175	543 aa		13.78	□□□□□ -0.2
PKN1-208	ENST00000586900	CYP26B1	Q9NR63	512 aa		13.78	□□□□□ -0.2
PKN1-208	ENST00000586900	PRKAG2	Q9UGJ0	569 aa		13.78	□□□□□ -0.2
PKN1-208	ENST00000586900	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.78	□□□□□ -0.2
PKN1-208	ENST00000586900	DBR1	Q9UK59	544 aa	Known RBP	13.78	□□□□□ -0.2
PKN1-208	ENST00000586900	LOXHD1	Q8IVV2	1947 aa		13.78	□□□□□ -0.2
PKN1-208	ENST00000586900	IGKV6-21	A0A0C4DH24	114 aa		13.77	□□□□□ -0.21
PKN1-208	ENST00000586900	TRIM43B	A6NCK2	446 aa		13.77	□□□□□ -0.21
PKN1-208	ENST00000586900	PP2D1	A8MPX8	630 aa		13.77	□□□□□ -0.21
PKN1-208	ENST00000586900	C22orf31	O95567	290 aa		13.77	□□□□□ -0.21
PKN1-208	ENST00000586900	CYP2C9	P11712	490 aa		13.77	□□□□□ -0.21
PKN1-208	ENST00000586900	KLRC1	P26715	233 aa		13.77	□□□□□ -0.21
PKN1-208	ENST00000586900	CDC25A	P30304	524 aa		13.77	□□□□□ -0.21
PKN1-208	ENST00000586900	IGBP1	P78318	339 aa		13.77	□□□□□ -0.21
PKN1-208	ENST00000586900	BFSP2	Q13515	415 aa		13.77	□□□□□ -0.21
PKN1-208	ENST00000586900	ECM1	Q16610	540 aa		13.77	□□□□□ -0.21
PKN1-208	ENST00000586900	TRIM71	Q2Q1W2	868 aa	Known RBP	13.77	□□□□□ -0.21
PKN1-208	ENST00000586900	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.77	□□□□□ -0.21
PKN1-208	ENST00000586900	SH3RF1	Q7Z6J0	888 aa		13.77	□□□□□ -0.21
PKN1-208	ENST00000586900	CABP7	Q86V35	215 aa		13.77	□□□□□ -0.21
PKN1-208	ENST00000586900	RETREG2	Q8NC44	543 aa		13.77	□□□□□ -0.21
PKN1-208	ENST00000586900	LEO1	Q8WVC0	666 aa	Predicted RBP	13.77	□□□□□ -0.21
PKN1-208	ENST00000586900	TRAPPC12	Q8WVT3	735 aa		13.77	□□□□□ -0.21
PKN1-208	ENST00000586900	EVPL	Q92817	2033 aa		13.77	□□□□□ -0.21
PKN1-208	ENST00000586900	TRIM43	Q96BQ3	446 aa	Predicted RBP	13.77	□□□□□ -0.21
PKN1-208	ENST00000586900	CALML4	Q96GE6	196 aa		13.77	□□□□□ -0.21
PKN1-208	ENST00000586900	CLIC6	Q96NY7	704 aa		13.77	□□□□□ -0.21
PKN1-208	ENST00000586900	NOC4L	Q9BVI4	516 aa	Known RBP	13.77	□□□□□ -0.21
PKN1-208	ENST00000586900	KIAA1024	Q9UPX6	916 aa		13.77	□□□□□ -0.21
PKN1-208	ENST00000586900	ZBTB39	O15060	712 aa		13.76	□□□□□ -0.21
PKN1-208	ENST00000586900	MAF	O75444	373 aa	Predicted RBP	13.76	□□□□□ -0.21
PKN1-208	ENST00000586900	TIMP1	P01033	207 aa		13.76	□□□□□ -0.21
PKN1-208	ENST00000586900	RAG1	P15918	1043 aa		13.76	□□□□□ -0.21
PKN1-208	ENST00000586900	NCL	P19338	710 aa	Known RBP	13.76	□□□□□ -0.21
PKN1-208	ENST00000586900	RFC5	P40937	340 aa		13.76	□□□□□ -0.21
PKN1-208	ENST00000586900	RARRES1	P49788	294 aa		13.76	□□□□□ -0.21
PKN1-208	ENST00000586900	TBC1D8B	Q0IIM8	1120 aa		13.76	□□□□□ -0.21
PKN1-208	ENST00000586900	MTERF2	Q49AM1	385 aa		13.76	□□□□□ -0.21
PKN1-208	ENST00000586900	XKR9	Q5GH70	373 aa		13.76	□□□□□ -0.21
PKN1-208	ENST00000586900	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13.76	□□□□□ -0.21
PKN1-208	ENST00000586900	POTEG	Q6S5H5	508 aa		13.76	□□□□□ -0.21
PKN1-208	ENST00000586900	RSPH3	Q86UC2	560 aa		13.76	□□□□□ -0.21
PKN1-208	ENST00000586900	ZNF710	Q8N1W2	664 aa		13.76	□□□□□ -0.21
PKN1-208	ENST00000586900	NME8	Q8N427	588 aa		13.76	□□□□□ -0.21
PKN1-208	ENST00000586900	LINC01465	Q8N7H1	131 aa		13.76	□□□□□ -0.21
PKN1-208	ENST00000586900	PIGO	Q8TEQ8	1089 aa		13.76	□□□□□ -0.21
PKN1-208	ENST00000586900	DHX38	Q92620	1227 aa	Known RBP	13.76	□□□□□ -0.21
PKN1-208	ENST00000586900	CDK5RAP3	Q96JB5	506 aa		13.76	□□□□□ -0.21
PKN1-208	ENST00000586900	CEP170P1	Q96L14	293 aa		13.76	□□□□□ -0.21
PKN1-208	ENST00000586900	SPATA32	Q96LK8	384 aa		13.76	□□□□□ -0.21
PKN1-208	ENST00000586900	HIPK3	Q9H422	1215 aa		13.76	□□□□□ -0.21
PKN1-208	ENST00000586900	DHX33	Q9H6R0	707 aa	Known RBP	13.76	□□□□□ -0.21
PKN1-208	ENST00000586900	PRDM5	Q9NQX1	630 aa	Predicted RBP	13.76	□□□□□ -0.21
PKN1-208	ENST00000586900	DDX19A	Q9NUU7	478 aa	Known RBP	13.76	□□□□□ -0.21
PKN1-208	ENST00000586900	PCDHA7	Q9UN72	937 aa		13.76	□□□□□ -0.21
PKN1-208	ENST00000586900	DNM3	Q9UQ16	869 aa		13.76	□□□□□ -0.21
PKN1-208	ENST00000586900	DNAH12	Q6ZR08	3092 aa		13.76	□□□□□ -0.21
PKN1-208	ENST00000586900	ARID2	Q68CP9	1835 aa		13.76	□□□□□ -0.21
PKN1-208	ENST00000586900	TMEM150B	A6NC51	233 aa		13.75	□□□□□ -0.21
PKN1-208	ENST00000586900	GAS2	O43903	313 aa	Known RBP	13.75	□□□□□ -0.21
PKN1-208	ENST00000586900	DGAT1	O75907	488 aa		13.75	□□□□□ -0.21
PKN1-208	ENST00000586900	PARN	O95453	639 aa	Known RBP	13.75	□□□□□ -0.21
PKN1-208	ENST00000586900	EYA4	O95677	639 aa		13.75	□□□□□ -0.21
PKN1-208	ENST00000586900	TMOD1	P28289	359 aa		13.75	□□□□□ -0.21
PKN1-208	ENST00000586900	TXLNA	P40222	546 aa		13.75	□□□□□ -0.21
PKN1-208	ENST00000586900	ME1	P48163	572 aa		13.75	□□□□□ -0.21
PKN1-208	ENST00000586900	NPEPPS	P55786	919 aa		13.75	□□□□□ -0.21
PKN1-208	ENST00000586900	GRB10	Q13322	594 aa		13.75	□□□□□ -0.21
PKN1-208	ENST00000586900	TMEM119	Q4V9L6	283 aa		13.75	□□□□□ -0.21
PKN1-208	ENST00000586900	PLA2G4F	Q68DD2	849 aa		13.75	□□□□□ -0.21
PKN1-208	ENST00000586900	RUFY4	Q6ZNE9	571 aa		13.75	□□□□□ -0.21
PKN1-208	ENST00000586900	SYMPK	Q92797	1274 aa	Known RBP	13.75	□□□□□ -0.21
PKN1-208	ENST00000586900	WNT8B	Q93098	351 aa		13.75	□□□□□ -0.21
PKN1-208	ENST00000586900	EPSTI1	Q96J88	318 aa		13.75	□□□□□ -0.21
PKN1-208	ENST00000586900	CCDC43	Q96MW1	224 aa	Known RBP	13.75	□□□□□ -0.21
PKN1-208	ENST00000586900	PNMA5	Q96PV4	448 aa		13.75	□□□□□ -0.21
PKN1-208	ENST00000586900	CCDC39	Q9UFE4	941 aa		13.75	□□□□□ -0.21
PKN1-208	ENST00000586900	CEP290	O15078	2479 aa		13.74	□□□□□ -0.21
PKN1-208	ENST00000586900	CKB	P12277	381 aa		13.74	□□□□□ -0.21
PKN1-208	ENST00000586900	SELP	P16109	830 aa		13.74	□□□□□ -0.21
PKN1-208	ENST00000586900	CDC42EP1	Q00587	391 aa		13.74	□□□□□ -0.21
PKN1-208	ENST00000586900	FAM26D	Q5JW98	314 aa		13.74	□□□□□ -0.21
PKN1-208	ENST00000586900	ADAL	Q6DHV7	355 aa		13.74	□□□□□ -0.21
PKN1-208	ENST00000586900	MFSD5	Q6N075	450 aa		13.74	□□□□□ -0.21
PKN1-208	ENST00000586900	EFCAB12	Q6NXP0	572 aa		13.74	□□□□□ -0.21
PKN1-208	ENST00000586900	USP49	Q70CQ1	688 aa		13.74	□□□□□ -0.21
PKN1-208	ENST00000586900	KIAA0319L	Q8IZA0	1049 aa		13.74	□□□□□ -0.21
PKN1-208	ENST00000586900	DNAJB3	Q8WWF6	145 aa		13.74	□□□□□ -0.21
PKN1-208	ENST00000586900	SLC7A3	Q8WY07	619 aa		13.74	□□□□□ -0.21
PKN1-208	ENST00000586900	LTBP2	Q14767	1821 aa		13.74	□□□□□ -0.21
PKN1-208	ENST00000586900	ARHGEF35	A5YM69	484 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms