RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 SCAND2PQ9GZW5 306 aaPredicted RBP21.42■■□□□ 1.02
DDX39A-204ENST00000586558 HIPK3Q9H422 1215 aa21.42■■□□□ 1.02
DDX39A-204ENST00000586558 CYP26B1Q9NR63 512 aa21.42■■□□□ 1.02
DDX39A-204ENST00000586558 RCOR1Q9UKL0 485 aa21.42■■□□□ 1.02
DDX39A-204ENST00000586558 PCDHA2Q9Y5H9 948 aa21.42■■□□□ 1.02
DDX39A-204ENST00000586558 C22orf31O95567 290 aa21.41■■□□□ 1.02
DDX39A-204ENST00000586558 CYP2C9P11712 490 aa21.41■■□□□ 1.02
DDX39A-204ENST00000586558 CDC25AP30304 524 aa21.41■■□□□ 1.02
DDX39A-204ENST00000586558 GRIN1Q05586 938 aa21.41■■□□□ 1.02
DDX39A-204ENST00000586558 TBC1D8BQ0IIM8 1120 aa21.41■■□□□ 1.02
DDX39A-204ENST00000586558 HYIQ5T013 277 aa21.41■■□□□ 1.02
DDX39A-204ENST00000586558 POTEGQ6S5H5 508 aa21.41■■□□□ 1.02
DDX39A-204ENST00000586558 MTHFD1LQ6UB35 978 aa21.41■■□□□ 1.02
DDX39A-204ENST00000586558 RPAINQ86UA6 219 aa21.41■■□□□ 1.02
DDX39A-204ENST00000586558 JPH2Q9BR39 696 aaPredicted RBP21.41■■□□□ 1.02
DDX39A-204ENST00000586558 NT5C3AQ9H0P0 336 aa21.41■■□□□ 1.02
DDX39A-204ENST00000586558 CSRNP2Q9H175 543 aa21.41■■□□□ 1.02
DDX39A-204ENST00000586558 DBR1Q9UK59 544 aaKnown RBP21.41■■□□□ 1.02
DDX39A-204ENST00000586558 DNAH12Q6ZR08 3092 aa21.41■■□□□ 1.02
DDX39A-204ENST00000586558 WDR81Q562E7 1941 aa21.4■■□□□ 1.02
DDX39A-204ENST00000586558 SMIM35A0A1B0GVV1 85 aa21.4■■□□□ 1.02
DDX39A-204ENST00000586558 TRIM43BA6NCK2 446 aa21.4■■□□□ 1.02
DDX39A-204ENST00000586558 CUTAO60888 179 aa21.4■■□□□ 1.02
DDX39A-204ENST00000586558 KLRC1P26715 233 aa21.4■■□□□ 1.02
DDX39A-204ENST00000586558 MTERF2Q49AM1 385 aa21.4■■□□□ 1.02
DDX39A-204ENST00000586558 SH3RF1Q7Z6J0 888 aa21.4■■□□□ 1.02
DDX39A-204ENST00000586558 RSPH3Q86UC2 560 aa21.4■■□□□ 1.02
DDX39A-204ENST00000586558 CABP7Q86V35 215 aa21.4■■□□□ 1.02
DDX39A-204ENST00000586558 ZNF579Q8NAF0 562 aaKnown RBP21.4■■□□□ 1.02
DDX39A-204ENST00000586558 RETREG2Q8NC44 543 aa21.4■■□□□ 1.02
DDX39A-204ENST00000586558 DHX38Q92620 1227 aaKnown RBP21.4■■□□□ 1.02
DDX39A-204ENST00000586558 TRIM43Q96BQ3 446 aaPredicted RBP21.4■■□□□ 1.02
DDX39A-204ENST00000586558 CDK5RAP3Q96JB5 506 aa21.4■■□□□ 1.02
DDX39A-204ENST00000586558 CEP170P1Q96L14 293 aa21.4■■□□□ 1.02
DDX39A-204ENST00000586558 SPATA32Q96LK8 384 aa21.4■■□□□ 1.02
DDX39A-204ENST00000586558 CCDC43Q96MW1 224 aaKnown RBP21.4■■□□□ 1.02
DDX39A-204ENST00000586558 TMEM150BA6NC51 233 aa21.39■■□□□ 1.01
DDX39A-204ENST00000586558 TIMP1P01033 207 aa21.39■■□□□ 1.01
DDX39A-204ENST00000586558 RAG1P15918 1043 aa21.39■■□□□ 1.01
DDX39A-204ENST00000586558 TXLNAP40222 546 aa21.39■■□□□ 1.01
DDX39A-204ENST00000586558 RFC5P40937 340 aa21.39■■□□□ 1.01
DDX39A-204ENST00000586558 ME1P48163 572 aa21.39■■□□□ 1.01
DDX39A-204ENST00000586558 TRIM71Q2Q1W2 868 aaKnown RBP21.39■■□□□ 1.01
DDX39A-204ENST00000586558 XKR9Q5GH70 373 aa21.39■■□□□ 1.01
DDX39A-204ENST00000586558 PLA2G4FQ68DD2 849 aa21.39■■□□□ 1.01
DDX39A-204ENST00000586558 LEO1Q8WVC0 666 aaPredicted RBP21.39■■□□□ 1.01
DDX39A-204ENST00000586558 CALML4Q96GE6 196 aa21.39■■□□□ 1.01
DDX39A-204ENST00000586558 CLIC6Q96NY7 704 aa21.39■■□□□ 1.01
DDX39A-204ENST00000586558 CEP89Q96ST8 783 aa21.39■■□□□ 1.01
DDX39A-204ENST00000586558 CCSER1Q9C0I3 900 aa21.39■■□□□ 1.01
DDX39A-204ENST00000586558 DDX19AQ9NUU7 478 aaKnown RBP21.39■■□□□ 1.01
DDX39A-204ENST00000586558 KIAA1024Q9UPX6 916 aa21.39■■□□□ 1.01
DDX39A-204ENST00000586558 TMOD1P28289 359 aa21.38■■□□□ 1.01
DDX39A-204ENST00000586558 NPEPPSP55786 919 aa21.38■■□□□ 1.01
DDX39A-204ENST00000586558 ECM1Q16610 540 aa21.38■■□□□ 1.01
DDX39A-204ENST00000586558 RUFY4Q6ZNE9 571 aa21.38■■□□□ 1.01
DDX39A-204ENST00000586558 PIGOQ8TEQ8 1089 aa21.38■■□□□ 1.01
DDX39A-204ENST00000586558 SLC7A3Q8WY07 619 aa21.38■■□□□ 1.01
DDX39A-204ENST00000586558 ZMYND8Q9ULU4 1186 aaPredicted RBP21.38■■□□□ 1.01
DDX39A-204ENST00000586558 DNM3Q9UQ16 869 aa21.38■■□□□ 1.01
DDX39A-204ENST00000586558 IGKV6-21A0A0C4DH24 114 aa21.37■■□□□ 1.01
DDX39A-204ENST00000586558 ZBTB39O15060 712 aa21.37■■□□□ 1.01
DDX39A-204ENST00000586558 GAS2O43903 313 aaKnown RBP21.37■■□□□ 1.01
DDX39A-204ENST00000586558 MAFO75444 373 aaPredicted RBP21.37■■□□□ 1.01
DDX39A-204ENST00000586558 RARRES1P49788 294 aa21.37■■□□□ 1.01
DDX39A-204ENST00000586558 POLGP54098 1239 aaPredicted RBP21.37■■□□□ 1.01
DDX39A-204ENST00000586558 GRB10Q13322 594 aa21.37■■□□□ 1.01
DDX39A-204ENST00000586558 TMEM119Q4V9L6 283 aa21.37■■□□□ 1.01
DDX39A-204ENST00000586558 ZNF710Q8N1W2 664 aa21.37■■□□□ 1.01
DDX39A-204ENST00000586558 NME8Q8N427 588 aa21.37■■□□□ 1.01
DDX39A-204ENST00000586558 RASSF8Q8NHQ8 419 aa21.37■■□□□ 1.01
DDX39A-204ENST00000586558 SYMPKQ92797 1274 aaKnown RBP21.37■■□□□ 1.01
DDX39A-204ENST00000586558 WNT8BQ93098 351 aa21.37■■□□□ 1.01
DDX39A-204ENST00000586558 PPP1R12CQ9BZL4 782 aa21.37■■□□□ 1.01
DDX39A-204ENST00000586558 DHX33Q9H6R0 707 aaKnown RBP21.37■■□□□ 1.01
DDX39A-204ENST00000586558 ARHGEF35A5YM69 484 aa21.36■■□□□ 1.01
DDX39A-204ENST00000586558 DGAT1O75907 488 aa21.36■■□□□ 1.01
DDX39A-204ENST00000586558 PARNO95453 639 aaKnown RBP21.36■■□□□ 1.01
DDX39A-204ENST00000586558 CKBP12277 381 aa21.36■■□□□ 1.01
DDX39A-204ENST00000586558 SELPP16109 830 aa21.36■■□□□ 1.01
DDX39A-204ENST00000586558 THPOP40225 353 aa21.36■■□□□ 1.01
DDX39A-204ENST00000586558 DNM2P50570 870 aa21.36■■□□□ 1.01
DDX39A-204ENST00000586558 ZRSR1Q15695 479 aaKnown RBP21.36■■□□□ 1.01
DDX39A-204ENST00000586558 AXDND1Q5T1B0 1012 aaPredicted RBP21.36■■□□□ 1.01
DDX39A-204ENST00000586558 METTL13Q8N6R0 699 aa21.36■■□□□ 1.01
DDX39A-204ENST00000586558 LINC01465Q8N7H1 131 aa21.36■■□□□ 1.01
DDX39A-204ENST00000586558 EPSTI1Q96J88 318 aa21.36■■□□□ 1.01
DDX39A-204ENST00000586558 PNMA5Q96PV4 448 aa21.36■■□□□ 1.01
DDX39A-204ENST00000586558 MAP7D2Q96T17 732 aa21.36■■□□□ 1.01
DDX39A-204ENST00000586558 LBHD1Q9BQE6 289 aaPredicted RBP21.36■■□□□ 1.01
DDX39A-204ENST00000586558 CCDC39Q9UFE4 941 aa21.36■■□□□ 1.01
DDX39A-204ENST00000586558 PCDHA7Q9UN72 937 aa21.36■■□□□ 1.01
DDX39A-204ENST00000586558 PDE4DIPQ5VU43 2346 aa21.36■■□□□ 1.01
DDX39A-204ENST00000586558 KAT6AQ92794 2004 aa21.35■■□□□ 1.01
DDX39A-204ENST00000586558 EYA4O95677 639 aa21.35■■□□□ 1.01
DDX39A-204ENST00000586558 SYN1P17600 705 aa21.35■■□□□ 1.01
DDX39A-204ENST00000586558 CYP2C18P33260 490 aa21.35■■□□□ 1.01
DDX39A-204ENST00000586558 SPECC1Q5M775 1068 aa21.35■■□□□ 1.01
DDX39A-204ENST00000586558 MFSD5Q6N075 450 aa21.35■■□□□ 1.01
DDX39A-204ENST00000586558 EFCAB12Q6NXP0 572 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms