RNA–Protein interactions for RNA: ENST00000586441.1

ERCC2-207, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 682 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-207ENST00000586441 AIFM3Q96NN9 605 aa13.94□□□□□ -0.18
ERCC2-207ENST00000586441 TEKT3Q9BXF9 490 aa13.94□□□□□ -0.18
ERCC2-207ENST00000586441 FTHL17Q9BXU8 183 aa13.94□□□□□ -0.18
ERCC2-207ENST00000586441 PRDM12Q9H4Q4 367 aa13.94□□□□□ -0.18
ERCC2-207ENST00000586441 NRBP2Q9NSY0 501 aa13.94□□□□□ -0.18
ERCC2-207ENST00000586441 LMCD1Q9NZU5 365 aa13.94□□□□□ -0.18
ERCC2-207ENST00000586441 CDH23Q9H251 3354 aa13.94□□□□□ -0.18
ERCC2-207ENST00000586441 A0A0C4DFX4 3053 aa13.94□□□□□ -0.18
ERCC2-207ENST00000586441 EVPLQ92817 2033 aa13.93□□□□□ -0.18
ERCC2-207ENST00000586441 IGSF9BQ9UPX0 1349 aa13.93□□□□□ -0.18
ERCC2-207ENST00000586441 ZBTB42B2RXF5 422 aa13.93□□□□□ -0.18
ERCC2-207ENST00000586441 DDX39AO00148 427 aaKnown RBP13.93□□□□□ -0.18
ERCC2-207ENST00000586441 STX6O43752 255 aa13.93□□□□□ -0.18
ERCC2-207ENST00000586441 LARGE1O95461 756 aa13.93□□□□□ -0.18
ERCC2-207ENST00000586441 CTSHP09668 335 aa13.93□□□□□ -0.18
ERCC2-207ENST00000586441 ZSCAN22P10073 491 aaPredicted RBP13.93□□□□□ -0.18
ERCC2-207ENST00000586441 FDPSP14324 419 aaKnown RBP13.93□□□□□ -0.18
ERCC2-207ENST00000586441 GJB2P29033 226 aa13.93□□□□□ -0.18
ERCC2-207ENST00000586441 IGBP1P78318 339 aa13.93□□□□□ -0.18
ERCC2-207ENST00000586441 LPIN1Q14693 890 aa13.93□□□□□ -0.18
ERCC2-207ENST00000586441 KLHL40Q2TBA0 621 aa13.93□□□□□ -0.18
ERCC2-207ENST00000586441 LRCH2Q5VUJ6 765 aa13.93□□□□□ -0.18
ERCC2-207ENST00000586441 CKAP2LQ8IYA6 745 aa13.93□□□□□ -0.18
ERCC2-207ENST00000586441 ETNPPLQ8TBG4 499 aa13.93□□□□□ -0.18
ERCC2-207ENST00000586441 SP7Q8TDD2 431 aaPredicted RBP13.93□□□□□ -0.18
ERCC2-207ENST00000586441 SAMD11Q96NU1 681 aa13.93□□□□□ -0.18
ERCC2-207ENST00000586441 LLPHQ9BRT6 129 aaKnown RBP13.93□□□□□ -0.18
ERCC2-207ENST00000586441 CELF4Q9BZC1 486 aaKnown RBP13.93□□□□□ -0.18
ERCC2-207ENST00000586441 BRMS1Q9HCU9 246 aa13.93□□□□□ -0.18
ERCC2-207ENST00000586441 SAMM50Q9Y512 469 aa13.93□□□□□ -0.18
ERCC2-207ENST00000586441 CDY2AQ9Y6F7 541 aa13.93□□□□□ -0.18
ERCC2-207ENST00000586441 TTC3P53804 2025 aa13.93□□□□□ -0.18
ERCC2-207ENST00000586441 TRANK1O15050 2925 aa13.92□□□□□ -0.18
ERCC2-207ENST00000586441 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.92□□□□□ -0.18
ERCC2-207ENST00000586441 SYT1P21579 422 aa13.92□□□□□ -0.18
ERCC2-207ENST00000586441 ERVK-21P61565 698 aa13.92□□□□□ -0.18
ERCC2-207ENST00000586441 CDC42EP1Q00587 391 aa13.92□□□□□ -0.18
ERCC2-207ENST00000586441 CSPP1Q1MSJ5 1256 aa13.92□□□□□ -0.18
ERCC2-207ENST00000586441 INF2Q27J81 1249 aa13.92□□□□□ -0.18
ERCC2-207ENST00000586441 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.92□□□□□ -0.18
ERCC2-207ENST00000586441 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.92□□□□□ -0.18
ERCC2-207ENST00000586441 KIAA0319LQ8IZA0 1049 aa13.92□□□□□ -0.18
ERCC2-207ENST00000586441 NSUN7Q8NE18 718 aaKnown RBP13.92□□□□□ -0.18
ERCC2-207ENST00000586441 TGS1Q96RS0 853 aaKnown RBP13.92□□□□□ -0.18
ERCC2-207ENST00000586441 LMBRD1Q9NUN5 540 aa13.92□□□□□ -0.18
ERCC2-207ENST00000586441 RNF216Q9NWF9 866 aaPredicted RBP13.92□□□□□ -0.18
ERCC2-207ENST00000586441 GABBR1Q9UBS5 961 aa13.92□□□□□ -0.18
ERCC2-207ENST00000586441 DDX25Q9UHL0 483 aaKnown RBP13.92□□□□□ -0.18
ERCC2-207ENST00000586441 KCNJ14Q9UNX9 436 aa13.92□□□□□ -0.18
ERCC2-207ENST00000586441 KIF3AQ9Y496 699 aa13.92□□□□□ -0.18
ERCC2-207ENST00000586441 TRPV2Q9Y5S1 764 aa13.92□□□□□ -0.18
ERCC2-207ENST00000586441 COL4A6Q14031 1691 aa13.91□□□□□ -0.18
ERCC2-207ENST00000586441 ENPP3O14638 875 aa13.91□□□□□ -0.18
ERCC2-207ENST00000586441 DKC1O60832 514 aaKnown RBP eCLIP13.91□□□□□ -0.18
ERCC2-207ENST00000586441 TDP2O95551 362 aa13.91□□□□□ -0.18
ERCC2-207ENST00000586441 MBD3O95983 291 aa13.91□□□□□ -0.18
ERCC2-207ENST00000586441 GHRP10912 638 aa13.91□□□□□ -0.18
ERCC2-207ENST00000586441 TMOD1P28289 359 aa13.91□□□□□ -0.18
ERCC2-207ENST00000586441 PPP2R5CQ13362 524 aa13.91□□□□□ -0.18
ERCC2-207ENST00000586441 ADGRE1Q14246 886 aa13.91□□□□□ -0.18
ERCC2-207ENST00000586441 NIFKQ9BYG3 293 aaKnown RBP13.91□□□□□ -0.18
ERCC2-207ENST00000586441 OSBPL7Q9BZF2 842 aa13.91□□□□□ -0.18
ERCC2-207ENST00000586441 KCNMB3Q9NPA1 279 aa13.91□□□□□ -0.18
ERCC2-207ENST00000586441 SIP14410 1827 aa13.9□□□□□ -0.18
ERCC2-207ENST00000586441 GTPBP6O43824 516 aaPredicted RBP13.9□□□□□ -0.18
ERCC2-207ENST00000586441 C22orf31O95567 290 aa13.9□□□□□ -0.18
ERCC2-207ENST00000586441 MMP1P03956 469 aa13.9□□□□□ -0.18
ERCC2-207ENST00000586441 NCLP19338 710 aaKnown RBP13.9□□□□□ -0.18
ERCC2-207ENST00000586441 KRT2P35908 639 aa13.9□□□□□ -0.18
ERCC2-207ENST00000586441 TRIM29Q14134 588 aa13.9□□□□□ -0.18
ERCC2-207ENST00000586441 LETM2Q2VYF4 491 aa13.9□□□□□ -0.18
ERCC2-207ENST00000586441 XKR3Q5GH77 459 aa13.9□□□□□ -0.18
ERCC2-207ENST00000586441 MIER3Q7Z3K6 550 aa13.9□□□□□ -0.18
ERCC2-207ENST00000586441 SLFN12Q8IYM2 578 aa13.9□□□□□ -0.18
ERCC2-207ENST00000586441 MYOCDQ8IZQ8 938 aa13.9□□□□□ -0.18
ERCC2-207ENST00000586441 NECAB1Q8N987 351 aa13.9□□□□□ -0.18
ERCC2-207ENST00000586441 TRAPPC12Q8WVT3 735 aa13.9□□□□□ -0.18
ERCC2-207ENST00000586441 TNFRSF25Q93038 417 aa13.9□□□□□ -0.18
ERCC2-207ENST00000586441 FAM49AQ9H0Q0 323 aaPredicted RBP13.9□□□□□ -0.18
ERCC2-207ENST00000586441 UNC45AQ9H3U1 944 aa13.9□□□□□ -0.18
ERCC2-207ENST00000586441 AGO3Q9H9G7 860 aaKnown RBP13.9□□□□□ -0.18
ERCC2-207ENST00000586441 PPME1Q9Y570 386 aa13.9□□□□□ -0.18
ERCC2-207ENST00000586441 PRUNE2Q8WUY3 3088 aa13.9□□□□□ -0.18
ERCC2-207ENST00000586441 LOXHD1Q8IVV2 1947 aa13.9□□□□□ -0.18
ERCC2-207ENST00000586441 LINC01553A4QN01 128 aa13.89□□□□□ -0.19
ERCC2-207ENST00000586441 GPR182O15218 404 aa13.89□□□□□ -0.19
ERCC2-207ENST00000586441 ZNF862O60290 1169 aa13.89□□□□□ -0.19
ERCC2-207ENST00000586441 F13A1P00488 732 aa13.89□□□□□ -0.19
ERCC2-207ENST00000586441 OATP04181 439 aa13.89□□□□□ -0.19
ERCC2-207ENST00000586441 CRYBB1P53674 252 aaPredicted RBP13.89□□□□□ -0.19
ERCC2-207ENST00000586441 HMGN5P82970 282 aaKnown RBP13.89□□□□□ -0.19
ERCC2-207ENST00000586441 TARBP2Q15633 366 aaKnown RBP13.89□□□□□ -0.19
ERCC2-207ENST00000586441 LARP1BQ659C4 914 aaKnown RBP13.89□□□□□ -0.19
ERCC2-207ENST00000586441 PIK3AP1Q6ZUJ8 805 aa13.89□□□□□ -0.19
ERCC2-207ENST00000586441 EXOC8Q8IYI6 725 aa13.89□□□□□ -0.19
ERCC2-207ENST00000586441 CRIPAKQ8N1N5 446 aa13.89□□□□□ -0.19
ERCC2-207ENST00000586441 LINC01465Q8N7H1 131 aa13.89□□□□□ -0.19
ERCC2-207ENST00000586441 ATXN2LQ8WWM7 1075 aaKnown RBP13.89□□□□□ -0.19
ERCC2-207ENST00000586441 TSPYL2Q9H2G4 693 aaPredicted RBP13.89□□□□□ -0.19
ERCC2-207ENST00000586441 PADI3Q9ULW8 664 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms