RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 PTPN21Q16825 1174 aa22.66■■□□□ 1.22
ATG4D-204ENST00000586417 HERC4Q5GLZ8 1057 aaPredicted RBP22.66■■□□□ 1.22
ATG4D-204ENST00000586417 OLFML2BQ68BL8 750 aa22.66■■□□□ 1.22
ATG4D-204ENST00000586417 C1orf186Q6ZWK4 172 aa22.66■■□□□ 1.22
ATG4D-204ENST00000586417 LRRC8AQ8IWT6 810 aa22.66■■□□□ 1.22
ATG4D-204ENST00000586417 NOC3LQ8WTT2 800 aaKnown RBP22.66■■□□□ 1.22
ATG4D-204ENST00000586417 TRIB2Q92519 343 aa22.66■■□□□ 1.22
ATG4D-204ENST00000586417 SRRTQ9BXP5 876 aaKnown RBP22.66■■□□□ 1.22
ATG4D-204ENST00000586417 PYCARDQ9ULZ3 195 aa22.66■■□□□ 1.22
ATG4D-204ENST00000586417 KRT76Q01546 638 aa22.65■■□□□ 1.22
ATG4D-204ENST00000586417 GNPTABQ3T906 1256 aa22.65■■□□□ 1.22
ATG4D-204ENST00000586417 TAPT1Q6NXT6 567 aa22.65■■□□□ 1.22
ATG4D-204ENST00000586417 CSGALNACT2Q8N6G5 542 aa22.65■■□□□ 1.22
ATG4D-204ENST00000586417 RTN4Q9NQC3 1192 aaKnown RBP22.65■■□□□ 1.22
ATG4D-204ENST00000586417 TEX33O43247 280 aa22.64■■□□□ 1.22
ATG4D-204ENST00000586417 SORBS3O60504 671 aa22.64■■□□□ 1.22
ATG4D-204ENST00000586417 ARIH2O95376 493 aa22.64■■□□□ 1.22
ATG4D-204ENST00000586417 ELNP15502 786 aa22.64■■□□□ 1.22
ATG4D-204ENST00000586417 ICAM3P32942 547 aa22.64■■□□□ 1.22
ATG4D-204ENST00000586417 PBX1P40424 430 aa22.64■■□□□ 1.22
ATG4D-204ENST00000586417 FOXR2Q6PJQ5 311 aa22.64■■□□□ 1.22
ATG4D-204ENST00000586417 MYOCDQ8IZQ8 938 aa22.64■■□□□ 1.22
ATG4D-204ENST00000586417 MSL3Q8N5Y2 521 aaKnown RBP22.64■■□□□ 1.22
ATG4D-204ENST00000586417 ZSWIM4Q9H7M6 989 aa22.64■■□□□ 1.22
ATG4D-204ENST00000586417 TBC1D7Q9P0N9 293 aa22.64■■□□□ 1.22
ATG4D-204ENST00000586417 WDR64B1ANS9 1081 aa22.63■■□□□ 1.21
ATG4D-204ENST00000586417 RSPH10B2B2RC85 870 aa22.63■■□□□ 1.21
ATG4D-204ENST00000586417 LYPLA2O95372 231 aa22.63■■□□□ 1.21
ATG4D-204ENST00000586417 RSPH10BP0C881 870 aa22.63■■□□□ 1.21
ATG4D-204ENST00000586417 HOXD10P28358 340 aa22.63■■□□□ 1.21
ATG4D-204ENST00000586417 CLCN1P35523 988 aa22.63■■□□□ 1.21
ATG4D-204ENST00000586417 JAK3P52333 1124 aa22.63■■□□□ 1.21
ATG4D-204ENST00000586417 COPB1P53618 953 aaKnown RBP22.63■■□□□ 1.21
ATG4D-204ENST00000586417 ARMCX5Q6P1M9 558 aa22.63■■□□□ 1.21
ATG4D-204ENST00000586417 CDHR1Q96JP9 859 aa22.63■■□□□ 1.21
ATG4D-204ENST00000586417 SENP7Q9BQF6 1050 aa22.63■■□□□ 1.21
ATG4D-204ENST00000586417 NFASCO94856 1347 aa22.63■■□□□ 1.21
ATG4D-204ENST00000586417 GNRH1P01148 92 aa22.63■■□□□ 1.21
ATG4D-204ENST00000586417 EEF1GP26641 437 aaKnown RBP22.63■■□□□ 1.21
ATG4D-204ENST00000586417 SFNP31947 248 aa22.63■■□□□ 1.21
ATG4D-204ENST00000586417 QARSP47897 775 aaKnown RBP22.63■■□□□ 1.21
ATG4D-204ENST00000586417 TRIM32Q13049 653 aa22.63■■□□□ 1.21
ATG4D-204ENST00000586417 TBX2Q13207 712 aaPredicted RBP22.63■■□□□ 1.21
ATG4D-204ENST00000586417 ACVR2BQ13705 512 aa22.63■■□□□ 1.21
ATG4D-204ENST00000586417 LY6KQ17RY6 165 aa22.63■■□□□ 1.21
ATG4D-204ENST00000586417 ZCWPW2Q504Y3 356 aa22.63■■□□□ 1.21
ATG4D-204ENST00000586417 ZNF746Q6NUN9 644 aaPredicted RBP22.63■■□□□ 1.21
ATG4D-204ENST00000586417 SFR1Q86XK3 245 aa22.63■■□□□ 1.21
ATG4D-204ENST00000586417 VTA1Q9NP79 307 aa22.63■■□□□ 1.21
ATG4D-204ENST00000586417 TELO2Q9Y4R8 837 aa22.63■■□□□ 1.21
ATG4D-204ENST00000586417 SAMM50Q9Y512 469 aa22.63■■□□□ 1.21
ATG4D-204ENST00000586417 TRIM17Q9Y577 477 aa22.63■■□□□ 1.21
ATG4D-204ENST00000586417 LRRC63Q05C16 580 aa22.62■■□□□ 1.21
ATG4D-204ENST00000586417 UGCGQ16739 394 aa22.62■■□□□ 1.21
ATG4D-204ENST00000586417 CCDC62Q6P9F0 684 aa22.62■■□□□ 1.21
ATG4D-204ENST00000586417 CCDC150Q8NCX0 1101 aa22.62■■□□□ 1.21
ATG4D-204ENST00000586417 RDM1Q8NG50 284 aa22.62■■□□□ 1.21
ATG4D-204ENST00000586417 KIAA1524Q8TCG1 905 aa22.62■■□□□ 1.21
ATG4D-204ENST00000586417 SCFD1Q8WVM8 642 aa22.62■■□□□ 1.21
ATG4D-204ENST00000586417 ABHD16BQ9H3Z7 469 aa22.62■■□□□ 1.21
ATG4D-204ENST00000586417 ZHX3Q9H4I2 956 aa22.62■■□□□ 1.21
ATG4D-204ENST00000586417 TAB2Q9NYJ8 693 aa22.62■■□□□ 1.21
ATG4D-204ENST00000586417 KCND2Q9NZV8 630 aa22.62■■□□□ 1.21
ATG4D-204ENST00000586417 ZHX1Q9UKY1 873 aaPredicted RBP22.62■■□□□ 1.21
ATG4D-204ENST00000586417 UBA1P22314 1058 aaKnown RBP22.61■■□□□ 1.21
ATG4D-204ENST00000586417 ADCYAP1R1P41586 468 aa22.61■■□□□ 1.21
ATG4D-204ENST00000586417 CCZ1BP86790 482 aa22.61■■□□□ 1.21
ATG4D-204ENST00000586417 CCZ1P86791 482 aaPredicted RBP22.61■■□□□ 1.21
ATG4D-204ENST00000586417 IRF5Q13568 498 aa22.61■■□□□ 1.21
ATG4D-204ENST00000586417 FILIP1LQ4L180 1135 aa22.61■■□□□ 1.21
ATG4D-204ENST00000586417 SPECC1LQ69YQ0 1117 aa22.61■■□□□ 1.21
ATG4D-204ENST00000586417 ANKRD20A12PQ8NF67 263 aa22.61■■□□□ 1.21
ATG4D-204ENST00000586417 DDX41Q9UJV9 622 aaKnown RBP22.61■■□□□ 1.21
ATG4D-204ENST00000586417 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.61■■□□□ 1.21
ATG4D-204ENST00000586417 ADCY6O43306 1168 aa22.61■■□□□ 1.21
ATG4D-204ENST00000586417 HSPA8P11142 646 aaKnown RBP22.61■■□□□ 1.21
ATG4D-204ENST00000586417 CASP5P51878 434 aa22.61■■□□□ 1.21
ATG4D-204ENST00000586417 GJC2Q5T442 439 aaPredicted RBP22.61■■□□□ 1.21
ATG4D-204ENST00000586417 EPM2AIP1Q7L775 607 aaPredicted RBP22.61■■□□□ 1.21
ATG4D-204ENST00000586417 COPS5Q92905 334 aa22.61■■□□□ 1.21
ATG4D-204ENST00000586417 DBR1Q9UK59 544 aaKnown RBP22.61■■□□□ 1.21
ATG4D-204ENST00000586417 COL4A3BPQ9Y5P4 624 aa22.61■■□□□ 1.21
ATG4D-204ENST00000586417 ADCY3O60266 1144 aa22.6■■□□□ 1.21
ATG4D-204ENST00000586417 TBCAO75347 108 aaKnown RBP22.6■■□□□ 1.21
ATG4D-204ENST00000586417 ZNF865P0CJ78 1059 aaPredicted RBP22.6■■□□□ 1.21
ATG4D-204ENST00000586417 HSPA1AP0DMV8 641 aaKnown RBP22.6■■□□□ 1.21
ATG4D-204ENST00000586417 HSPA1BP0DMV9 641 aaKnown RBP22.6■■□□□ 1.21
ATG4D-204ENST00000586417 LRRC55Q6ZSA7 311 aa22.6■■□□□ 1.21
ATG4D-204ENST00000586417 CYFIP1Q7L576 1253 aa22.6■■□□□ 1.21
ATG4D-204ENST00000586417 C4orf19Q8IY42 314 aa22.6■■□□□ 1.21
ATG4D-204ENST00000586417 RAET1EQ8TD07 263 aa22.6■■□□□ 1.21
ATG4D-204ENST00000586417 SCFD2Q8WU76 684 aa22.6■■□□□ 1.21
ATG4D-204ENST00000586417 EEF2KMTQ96G04 330 aa22.6■■□□□ 1.21
ATG4D-204ENST00000586417 VPS16Q9H269 839 aa22.6■■□□□ 1.21
ATG4D-204ENST00000586417 TCEAL9Q9UHQ7 104 aa22.6■■□□□ 1.21
ATG4D-204ENST00000586417 RBM47A0AV96 593 aaKnown RBP22.59■■□□□ 1.21
ATG4D-204ENST00000586417 ARHGEF35A5YM69 484 aa22.59■■□□□ 1.21
ATG4D-204ENST00000586417 N4BP3O15049 544 aa22.59■■□□□ 1.21
ATG4D-204ENST00000586417 TXNP10599 105 aaKnown RBP22.59■■□□□ 1.21
ATG4D-204ENST00000586417 TGFB3P10600 412 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms