RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 PANK2Q9BZ23 570 aa15.2■□□□□ 0.02
VMP1-203ENST00000586245 SETD4Q9NVD3 440 aa15.2■□□□□ 0.02
VMP1-203ENST00000586245 STK17AQ9UEE5 414 aa15.2■□□□□ 0.02
VMP1-203ENST00000586245 GTF2IRD1Q9UHL9 959 aa15.2■□□□□ 0.02
VMP1-203ENST00000586245 DBR1Q9UK59 544 aaKnown RBP15.2■□□□□ 0.02
VMP1-203ENST00000586245 KCNH3Q9ULD8 1083 aa15.2■□□□□ 0.02
VMP1-203ENST00000586245 PPME1Q9Y570 386 aa15.2■□□□□ 0.02
VMP1-203ENST00000586245 MYH9P35579 1960 aaKnown RBP15.2■□□□□ 0.02
VMP1-203ENST00000586245 SCN10AQ9Y5Y9 1956 aa15.2■□□□□ 0.02
VMP1-203ENST00000586245 GRIN2DO15399 1336 aa15.19■□□□□ 0.02
VMP1-203ENST00000586245 MROH7Q68CQ1 1323 aa15.19■□□□□ 0.02
VMP1-203ENST00000586245 A0A087WWV3 80 aa15.19■□□□□ 0.02
VMP1-203ENST00000586245 TMEM150BA6NC51 233 aa15.19■□□□□ 0.02
VMP1-203ENST00000586245 E9PMD0 336 aa15.19■□□□□ 0.02
VMP1-203ENST00000586245 ZBTB39O15060 712 aa15.19■□□□□ 0.02
VMP1-203ENST00000586245 POLR2DO15514 142 aaKnown RBP15.19■□□□□ 0.02
VMP1-203ENST00000586245 EYA4O95677 639 aa15.19■□□□□ 0.02
VMP1-203ENST00000586245 SSBP05455 408 aaKnown RBP eCLIP15.19■□□□□ 0.02
VMP1-203ENST00000586245 RARRES1P49788 294 aa15.19■□□□□ 0.02
VMP1-203ENST00000586245 NPEPPSP55786 919 aa15.19■□□□□ 0.02
VMP1-203ENST00000586245 UBE2HP62256 183 aa15.19■□□□□ 0.02
VMP1-203ENST00000586245 EXOC8Q8IYI6 725 aa15.19■□□□□ 0.02
VMP1-203ENST00000586245 IQUBQ8NA54 791 aa15.19■□□□□ 0.02
VMP1-203ENST00000586245 BHMT2Q9H2M3 363 aa15.19■□□□□ 0.02
VMP1-203ENST00000586245 CYP26B1Q9NR63 512 aa15.19■□□□□ 0.02
VMP1-203ENST00000586245 NOD1Q9Y239 953 aa15.19■□□□□ 0.02
VMP1-203ENST00000586245 TLR3O15455 904 aaKnown RBP15.18■□□□□ 0.02
VMP1-203ENST00000586245 MAGEB2O15479 319 aa15.18■□□□□ 0.02
VMP1-203ENST00000586245 PLA2G4BP0C869 781 aa15.18■□□□□ 0.02
VMP1-203ENST00000586245 RFC5P40937 340 aa15.18■□□□□ 0.02
VMP1-203ENST00000586245 SYKP43405 635 aa15.18■□□□□ 0.02
VMP1-203ENST00000586245 CDK7P50613 346 aa15.18■□□□□ 0.02
VMP1-203ENST00000586245 NDUFA8P51970 172 aa15.18■□□□□ 0.02
VMP1-203ENST00000586245 POLGP54098 1239 aaPredicted RBP15.18■□□□□ 0.02
VMP1-203ENST00000586245 TBC1D8BQ0IIM8 1120 aa15.18■□□□□ 0.02
VMP1-203ENST00000586245 TARBP2Q15633 366 aaKnown RBP15.18■□□□□ 0.02
VMP1-203ENST00000586245 C1orf53Q5VUE5 145 aa15.18■□□□□ 0.02
VMP1-203ENST00000586245 GDF6Q6KF10 455 aaPredicted RBP15.18■□□□□ 0.02
VMP1-203ENST00000586245 KCNK18Q7Z418 384 aa15.18■□□□□ 0.02
VMP1-203ENST00000586245 LMBR1Q8WVP7 490 aa15.18■□□□□ 0.02
VMP1-203ENST00000586245 TRAPPC12Q8WVT3 735 aa15.18■□□□□ 0.02
VMP1-203ENST00000586245 LARP4BQ92615 738 aaKnown RBP15.18■□□□□ 0.02
VMP1-203ENST00000586245 RAD54LQ92698 747 aa15.18■□□□□ 0.02
VMP1-203ENST00000586245 DHX58Q96C10 678 aa15.18■□□□□ 0.02
VMP1-203ENST00000586245 JPH2Q9BR39 696 aaPredicted RBP15.18■□□□□ 0.02
VMP1-203ENST00000586245 SH2D3AQ9BRG2 576 aa15.18■□□□□ 0.02
VMP1-203ENST00000586245 CUEDC2Q9H467 287 aa15.18■□□□□ 0.02
VMP1-203ENST00000586245 TUBE1Q9UJT0 475 aa15.18■□□□□ 0.02
VMP1-203ENST00000586245 HPSEQ9Y251 543 aa15.18■□□□□ 0.02
VMP1-203ENST00000586245 WDR81Q562E7 1941 aa15.17■□□□□ 0.02
VMP1-203ENST00000586245 A0A087X0B3 334 aa15.17■□□□□ 0.02
VMP1-203ENST00000586245 FAM237AA0A1B0GTK4 181 aa15.17■□□□□ 0.02
VMP1-203ENST00000586245 ZBTB42B2RXF5 422 aa15.17■□□□□ 0.02
VMP1-203ENST00000586245 GADD45BO75293 160 aaPredicted RBP15.17■□□□□ 0.02
VMP1-203ENST00000586245 KLRC1P26715 233 aa15.17■□□□□ 0.02
VMP1-203ENST00000586245 HOXC8P31273 242 aa15.17■□□□□ 0.02
VMP1-203ENST00000586245 MCM6Q14566 821 aa15.17■□□□□ 0.02
VMP1-203ENST00000586245 UBE2Q1Q7Z7E8 422 aa15.17■□□□□ 0.02
VMP1-203ENST00000586245 CEP57L1Q8IYX8 460 aa15.17■□□□□ 0.02
VMP1-203ENST00000586245 RETREG2Q8NC44 543 aa15.17■□□□□ 0.02
VMP1-203ENST00000586245 SLC7A3Q8WY07 619 aa15.17■□□□□ 0.02
VMP1-203ENST00000586245 GOLPH3LQ9H4A5 285 aa15.17■□□□□ 0.02
VMP1-203ENST00000586245 USP25Q9UHP3 1055 aa15.17■□□□□ 0.02
VMP1-203ENST00000586245 DCDC2CA8MYV0 355 aa15.16■□□□□ 0.02
VMP1-203ENST00000586245 TREHO43280 583 aa15.16■□□□□ 0.02
VMP1-203ENST00000586245 USO1O60763 962 aaKnown RBP15.16■□□□□ 0.02
VMP1-203ENST00000586245 PQBP1O60828 265 aaKnown RBP15.16■□□□□ 0.02
VMP1-203ENST00000586245 DGAT1O75907 488 aa15.16■□□□□ 0.02
VMP1-203ENST00000586245 RTP1P59025 263 aa15.16■□□□□ 0.02
VMP1-203ENST00000586245 ADAM17P78536 824 aa15.16■□□□□ 0.02
VMP1-203ENST00000586245 ZNF200P98182 395 aaPredicted RBP15.16■□□□□ 0.02
VMP1-203ENST00000586245 DHX8Q14562 1220 aaKnown RBP15.16■□□□□ 0.02
VMP1-203ENST00000586245 SNX17Q15036 470 aa15.16■□□□□ 0.02
VMP1-203ENST00000586245 PTGISQ16647 500 aa15.16■□□□□ 0.02
VMP1-203ENST00000586245 TRIM60Q495X7 471 aa15.16■□□□□ 0.02
VMP1-203ENST00000586245 MARCH8Q5T0T0 291 aa15.16■□□□□ 0.02
VMP1-203ENST00000586245 MTHFD1LQ6UB35 978 aa15.16■□□□□ 0.02
VMP1-203ENST00000586245 SV2BQ7L1I2 683 aa15.16■□□□□ 0.02
VMP1-203ENST00000586245 SYT2Q8N9I0 419 aaPredicted RBP15.16■□□□□ 0.02
VMP1-203ENST00000586245 CCDC34Q96HJ3 373 aa15.16■□□□□ 0.02
VMP1-203ENST00000586245 MAGEF1Q9HAY2 307 aa15.16■□□□□ 0.02
VMP1-203ENST00000586245 BLOC1S4Q9NUP1 217 aa15.16■□□□□ 0.02
VMP1-203ENST00000586245 ATP11BQ9Y2G3 1177 aa15.16■□□□□ 0.02
VMP1-203ENST00000586245 MBLAC1A4D2B0 266 aaPredicted RBP15.15■□□□□ 0.02
VMP1-203ENST00000586245 GAS2O43903 313 aaKnown RBP15.15■□□□□ 0.02
VMP1-203ENST00000586245 B4GALT4O60513 344 aa15.15■□□□□ 0.02
VMP1-203ENST00000586245 MAFO75444 373 aaPredicted RBP15.15■□□□□ 0.02
VMP1-203ENST00000586245 C22orf31O95567 290 aa15.15■□□□□ 0.02
VMP1-203ENST00000586245 CYP2C9P11712 490 aa15.15■□□□□ 0.02
VMP1-203ENST00000586245 TMOD1P28289 359 aa15.15■□□□□ 0.02
VMP1-203ENST00000586245 MCM4P33991 863 aa15.15■□□□□ 0.02
VMP1-203ENST00000586245 DNM2P50570 870 aa15.15■□□□□ 0.02
VMP1-203ENST00000586245 SLC12A3P55017 1021 aa15.15■□□□□ 0.02
VMP1-203ENST00000586245 FAM160A1Q05DH4 1040 aa15.15■□□□□ 0.02
VMP1-203ENST00000586245 HIC1Q14526 733 aa15.15■□□□□ 0.02
VMP1-203ENST00000586245 EMC2Q15006 297 aa15.15■□□□□ 0.02
VMP1-203ENST00000586245 E2F4Q16254 413 aa15.15■□□□□ 0.02
VMP1-203ENST00000586245 LRRC26Q2I0M4 334 aa15.15■□□□□ 0.02
VMP1-203ENST00000586245 NAALADL2Q58DX5 795 aa15.15■□□□□ 0.02
VMP1-203ENST00000586245 EFCAB12Q6NXP0 572 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms