RNA–Protein interactions for RNA: ENST00000585409.2

LSM7-203, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM7, Length 512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-203ENST00000585409 RPAINQ86UA6 219 aa26.18■■□□□ 1.78
LSM7-203ENST00000585409 FOXP1Q9H334 677 aaPredicted RBP26.18■■□□□ 1.78
LSM7-203ENST00000585409 ITGB5P18084 799 aa26.17■■□□□ 1.78
LSM7-203ENST00000585409 GUCY1B3Q02153 619 aa26.17■■□□□ 1.78
LSM7-203ENST00000585409 BECN1Q14457 450 aa26.17■■□□□ 1.78
LSM7-203ENST00000585409 MOXD1Q6UVY6 613 aa26.17■■□□□ 1.78
LSM7-203ENST00000585409 PIK3AP1Q6ZUJ8 805 aa26.17■■□□□ 1.78
LSM7-203ENST00000585409 NEK8Q86SG6 692 aa26.17■■□□□ 1.78
LSM7-203ENST00000585409 PLA2G4DQ86XP0 818 aa26.17■■□□□ 1.78
LSM7-203ENST00000585409 CRYGNQ8WXF5 182 aa26.17■■□□□ 1.78
LSM7-203ENST00000585409 PRKAG3Q9UGI9 489 aa26.17■■□□□ 1.78
LSM7-203ENST00000585409 TCEAL9Q9UHQ7 104 aa26.17■■□□□ 1.78
LSM7-203ENST00000585409 TTC3P53804 2025 aa26.17■■□□□ 1.78
LSM7-203ENST00000585409 NRCAMQ92823 1304 aa26.16■■□□□ 1.78
LSM7-203ENST00000585409 POTEB3A0JP26 581 aa26.16■■□□□ 1.78
LSM7-203ENST00000585409 MEIS1O00470 390 aa26.16■■□□□ 1.78
LSM7-203ENST00000585409 CHRNA1P02708 482 aa26.16■■□□□ 1.78
LSM7-203ENST00000585409 GCFC2P16383 781 aaKnown RBP26.16■■□□□ 1.78
LSM7-203ENST00000585409 ZP2Q05996 745 aa26.16■■□□□ 1.78
LSM7-203ENST00000585409 LARP1BQ659C4 914 aaKnown RBP26.16■■□□□ 1.78
LSM7-203ENST00000585409 POTEBQ6S5H4 581 aa26.16■■□□□ 1.78
LSM7-203ENST00000585409 SDF4Q9BRK5 362 aa26.16■■□□□ 1.78
LSM7-203ENST00000585409 RC3H2Q9HBD1 1191 aaKnown RBP26.16■■□□□ 1.78
LSM7-203ENST00000585409 C19orf67A6NJJ6 358 aa26.15■■□□□ 1.78
LSM7-203ENST00000585409 BTBD18B2RXH4 712 aa26.15■■□□□ 1.78
LSM7-203ENST00000585409 ADAMTS3O15072 1205 aa26.15■■□□□ 1.78
LSM7-203ENST00000585409 INF2Q27J81 1249 aa26.15■■□□□ 1.78
LSM7-203ENST00000585409 UTP14CQ5TAP6 766 aaKnown RBP26.15■■□□□ 1.78
LSM7-203ENST00000585409 FIBCD1Q8N539 461 aa26.15■■□□□ 1.78
LSM7-203ENST00000585409 OXER1Q8TDS5 423 aa26.15■■□□□ 1.78
LSM7-203ENST00000585409 KCNH7Q9NS40 1196 aa26.15■■□□□ 1.78
LSM7-203ENST00000585409 FAM50BQ9Y247 325 aa26.15■■□□□ 1.78
LSM7-203ENST00000585409 DCXO43602 365 aa26.14■■□□□ 1.78
LSM7-203ENST00000585409 NCK2O43639 380 aa26.14■■□□□ 1.78
LSM7-203ENST00000585409 RB1P06400 928 aa26.14■■□□□ 1.78
LSM7-203ENST00000585409 LTBRP36941 435 aa26.14■■□□□ 1.78
LSM7-203ENST00000585409 NR5A1Q13285 461 aa26.14■■□□□ 1.78
LSM7-203ENST00000585409 CTC1Q2NKJ3 1217 aa26.14■■□□□ 1.78
LSM7-203ENST00000585409 C5orf42Q9H799 3197 aa26.13■■□□□ 1.77
LSM7-203ENST00000585409 PDIA4P13667 645 aaKnown RBP26.13■■□□□ 1.77
LSM7-203ENST00000585409 CTNNB1P35222 781 aa26.13■■□□□ 1.77
LSM7-203ENST00000585409 MGAT3Q09327 533 aa26.13■■□□□ 1.77
LSM7-203ENST00000585409 LETM2Q2VYF4 491 aa26.13■■□□□ 1.77
LSM7-203ENST00000585409 PRR16Q569H4 304 aa26.13■■□□□ 1.77
LSM7-203ENST00000585409 TAF2Q6P1X5 1199 aa26.13■■□□□ 1.77
LSM7-203ENST00000585409 RUFY4Q6ZNE9 571 aa26.13■■□□□ 1.77
LSM7-203ENST00000585409 ADHFE1Q8IWW8 467 aa26.13■■□□□ 1.77
LSM7-203ENST00000585409 CLP1Q92989 425 aaKnown RBP26.13■■□□□ 1.77
LSM7-203ENST00000585409 LMAN2LQ9H0V9 348 aa26.13■■□□□ 1.77
LSM7-203ENST00000585409 CLDND1Q9NY35 253 aa26.13■■□□□ 1.77
LSM7-203ENST00000585409 NOL7Q9UMY1 257 aaKnown RBP26.13■■□□□ 1.77
LSM7-203ENST00000585409 NFASCO94856 1347 aa26.13■■□□□ 1.77
LSM7-203ENST00000585409 ADGRA3Q8IWK6 1321 aa26.13■■□□□ 1.77
LSM7-203ENST00000585409 CYP3A7-CYP3A51PA0A087WV96 503 aa26.12■■□□□ 1.77
LSM7-203ENST00000585409 FAM86B1E9PN63 330 aa26.12■■□□□ 1.77
LSM7-203ENST00000585409 FAM86B2P0C5J1 330 aa26.12■■□□□ 1.77
LSM7-203ENST00000585409 CYP3A7P24462 503 aa26.12■■□□□ 1.77
LSM7-203ENST00000585409 BMPR1AP36894 532 aa26.12■■□□□ 1.77
LSM7-203ENST00000585409 TNFRSF25Q93038 417 aa26.12■■□□□ 1.77
LSM7-203ENST00000585409 C11orf84Q9BUA3 381 aaPredicted RBP26.12■■□□□ 1.77
LSM7-203ENST00000585409 TBC1D22BQ9NU19 505 aa26.12■■□□□ 1.77
LSM7-203ENST00000585409 RWDD3Q9Y3V2 267 aa26.12■■□□□ 1.77
LSM7-203ENST00000585409 KIAA1671Q9BY89 1806 aa26.11■■□□□ 1.77
LSM7-203ENST00000585409 GRM6O15303 877 aa26.11■■□□□ 1.77
LSM7-203ENST00000585409 GHRP10912 638 aa26.11■■□□□ 1.77
LSM7-203ENST00000585409 KCNA2P16389 499 aa26.11■■□□□ 1.77
LSM7-203ENST00000585409 TCF7P36402 384 aaPredicted RBP26.11■■□□□ 1.77
LSM7-203ENST00000585409 SP4Q02446 784 aa26.11■■□□□ 1.77
LSM7-203ENST00000585409 LPIN1Q14693 890 aa26.11■■□□□ 1.77
LSM7-203ENST00000585409 Q4G0T1 1027 aa26.11■■□□□ 1.77
LSM7-203ENST00000585409 MCTP1Q6DN14 999 aa26.11■■□□□ 1.77
LSM7-203ENST00000585409 PPP4R3AQ6IN85 833 aa26.11■■□□□ 1.77
LSM7-203ENST00000585409 EP400NLQ6ZTU2 488 aa26.11■■□□□ 1.77
LSM7-203ENST00000585409 NOSTRINQ8IVI9 506 aa26.11■■□□□ 1.77
LSM7-203ENST00000585409 ZNF689Q96CS4 500 aaPredicted RBP26.11■■□□□ 1.77
LSM7-203ENST00000585409 ZNF577Q9BSK1 485 aa26.11■■□□□ 1.77
LSM7-203ENST00000585409 AGO4Q9HCK5 861 aaKnown RBP26.11■■□□□ 1.77
LSM7-203ENST00000585409 IGLV3-22A0A075B6J6 115 aa26.1■■□□□ 1.77
LSM7-203ENST00000585409 HYAL1Q12794 435 aa26.1■■□□□ 1.77
LSM7-203ENST00000585409 CSPP1Q1MSJ5 1256 aa26.1■■□□□ 1.77
LSM7-203ENST00000585409 CYP2W1Q8TAV3 490 aa26.1■■□□□ 1.77
LSM7-203ENST00000585409 JPH1Q9HDC5 661 aaPredicted RBP26.1■■□□□ 1.77
LSM7-203ENST00000585409 PKD2L1Q9P0L9 805 aa26.1■■□□□ 1.77
LSM7-203ENST00000585409 DDX25Q9UHL0 483 aaKnown RBP26.1■■□□□ 1.77
LSM7-203ENST00000585409 ZNF318Q5VUA4 2279 aa26.1■■□□□ 1.77
LSM7-203ENST00000585409 MBLAC1A4D2B0 266 aaPredicted RBP26.09■■□□□ 1.77
LSM7-203ENST00000585409 IPO5O00410 1097 aaKnown RBP26.09■■□□□ 1.77
LSM7-203ENST00000585409 ENPP3O14638 875 aa26.09■■□□□ 1.77
LSM7-203ENST00000585409 MARCH6O60337 910 aa26.09■■□□□ 1.77
LSM7-203ENST00000585409 CCNT1O60563 726 aaKnown RBP26.09■■□□□ 1.77
LSM7-203ENST00000585409 ARP10275 920 aa26.09■■□□□ 1.77
LSM7-203ENST00000585409 TRAPPC10P48553 1259 aa26.09■■□□□ 1.77
LSM7-203ENST00000585409 UIMC1Q96RL1 719 aa26.09■■□□□ 1.77
LSM7-203ENST00000585409 LOXHD1Q8IVV2 1947 aa26.09■■□□□ 1.77
LSM7-203ENST00000585409 GSTTP1A0A1W2PQM5 241 aa26.08■■□□□ 1.77
LSM7-203ENST00000585409 ATP9AO75110 1047 aa26.08■■□□□ 1.77
LSM7-203ENST00000585409 U2AF2P26368 475 aaKnown RBP eCLIP26.08■■□□□ 1.77
LSM7-203ENST00000585409 DLX2Q07687 328 aaPredicted RBP26.08■■□□□ 1.77
LSM7-203ENST00000585409 PPFIA1Q13136 1202 aa26.08■■□□□ 1.77
LSM7-203ENST00000585409 ORC2Q13416 577 aaPredicted RBP26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms