RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 TMTC3Q6ZXV5 915 aa6.53□□□□□ -1.36
CDH8-213ENST00000584966 DTWD1Q8N5C7 304 aa6.53□□□□□ -1.36
CDH8-213ENST00000584966 NUP133Q8WUM0 1156 aa6.53□□□□□ -1.36
CDH8-213ENST00000584966 CITED4Q96RK1 184 aa6.53□□□□□ -1.36
CDH8-213ENST00000584966 PAGR1Q9BTK6 254 aa6.53□□□□□ -1.36
CDH8-213ENST00000584966 SPZ1Q9BXG8 430 aa6.53□□□□□ -1.36
CDH8-213ENST00000584966 EFCC1Q9HA90 598 aa6.53□□□□□ -1.36
CDH8-213ENST00000584966 RAVER2Q9HCJ3 691 aaKnown RBP6.53□□□□□ -1.36
CDH8-213ENST00000584966 VAT1LQ9HCJ6 419 aa6.53□□□□□ -1.36
CDH8-213ENST00000584966 PRDM10Q9NQV6 1147 aa6.53□□□□□ -1.36
CDH8-213ENST00000584966 STIM2Q9P246 746 aa6.53□□□□□ -1.36
CDH8-213ENST00000584966 SERTM1A2A2V5 107 aa6.52□□□□□ -1.37
CDH8-213ENST00000584966 OPLAHO14841 1288 aa6.52□□□□□ -1.37
CDH8-213ENST00000584966 TREHO43280 583 aa6.52□□□□□ -1.37
CDH8-213ENST00000584966 FZD6O60353 706 aa6.52□□□□□ -1.37
CDH8-213ENST00000584966 PFKFB2O60825 505 aa6.52□□□□□ -1.37
CDH8-213ENST00000584966 ZBED4O75132 1171 aa6.52□□□□□ -1.37
CDH8-213ENST00000584966 ADAMTS4O75173 837 aa6.52□□□□□ -1.37
CDH8-213ENST00000584966 ALX3O95076 343 aa6.52□□□□□ -1.37
CDH8-213ENST00000584966 ICAM1P05362 532 aa6.52□□□□□ -1.37
CDH8-213ENST00000584966 P4HBP07237 508 aaKnown RBP6.52□□□□□ -1.37
CDH8-213ENST00000584966 TCF3P15923 654 aa6.52□□□□□ -1.37
CDH8-213ENST00000584966 PSMC4P43686 418 aa6.52□□□□□ -1.37
CDH8-213ENST00000584966 CCT2P78371 535 aaKnown RBP6.52□□□□□ -1.37
CDH8-213ENST00000584966 SCRN1Q12765 414 aa6.52□□□□□ -1.37
CDH8-213ENST00000584966 RABEP1Q15276 862 aa6.52□□□□□ -1.37
CDH8-213ENST00000584966 RTN1Q16799 776 aa6.52□□□□□ -1.37
CDH8-213ENST00000584966 QRICH1Q2TAL8 776 aa6.52□□□□□ -1.37
CDH8-213ENST00000584966 MUM1L1Q5H9M0 696 aa6.52□□□□□ -1.37
CDH8-213ENST00000584966 SNRNP48Q6IEG0 339 aaKnown RBP6.52□□□□□ -1.37
CDH8-213ENST00000584966 ALKBH2Q6NS38 261 aa6.52□□□□□ -1.37
CDH8-213ENST00000584966 OTOP1Q7RTM1 612 aa6.52□□□□□ -1.37
CDH8-213ENST00000584966 GPR142Q7Z601 462 aa6.52□□□□□ -1.37
CDH8-213ENST00000584966 MICU3Q86XE3 530 aa6.52□□□□□ -1.37
CDH8-213ENST00000584966 CPXCR1Q8N123 301 aa6.52□□□□□ -1.37
CDH8-213ENST00000584966 SHCBP1Q8NEM2 672 aa6.52□□□□□ -1.37
CDH8-213ENST00000584966 CTCFLQ8NI51 663 aaPredicted RBP6.52□□□□□ -1.37
CDH8-213ENST00000584966 CLEC4DQ8WXI8 215 aa6.52□□□□□ -1.37
CDH8-213ENST00000584966 TBC1D5Q92609 795 aa6.52□□□□□ -1.37
CDH8-213ENST00000584966 SHISA4Q96DD7 197 aa6.52□□□□□ -1.37
CDH8-213ENST00000584966 PIGSQ96S52 555 aa6.52□□□□□ -1.37
CDH8-213ENST00000584966 LZTS2Q9BRK4 669 aa6.52□□□□□ -1.37
CDH8-213ENST00000584966 TEX13BQ9BXU2 312 aa6.52□□□□□ -1.37
CDH8-213ENST00000584966 NCOA5Q9HCD5 579 aaKnown RBP6.52□□□□□ -1.37
CDH8-213ENST00000584966 LRFN2Q9ULH4 789 aa6.52□□□□□ -1.37
CDH8-213ENST00000584966 GABRQQ9UN88 632 aa6.52□□□□□ -1.37
CDH8-213ENST00000584966 DNAJC25-GNG10A0A024R161 153 aa6.51□□□□□ -1.37
CDH8-213ENST00000584966 PNMA6FA0A0J9YX94 578 aa6.51□□□□□ -1.37
CDH8-213ENST00000584966 hCG_1642624A0A1W2PR95 340 aa6.51□□□□□ -1.37
CDH8-213ENST00000584966 GOLGA8AA7E2F4 631 aa6.51□□□□□ -1.37
CDH8-213ENST00000584966 GOLGA8BA8MQT2 603 aa6.51□□□□□ -1.37
CDH8-213ENST00000584966 ZBTB5O15062 677 aa6.51□□□□□ -1.37
CDH8-213ENST00000584966 ADAMTS3O15072 1205 aa6.51□□□□□ -1.37
CDH8-213ENST00000584966 DTNBO60941 627 aa6.51□□□□□ -1.37
CDH8-213ENST00000584966 SLC25A27O95847 323 aa6.51□□□□□ -1.37
CDH8-213ENST00000584966 RECKO95980 971 aa6.51□□□□□ -1.37
CDH8-213ENST00000584966 FDPSP14324 419 aaKnown RBP6.51□□□□□ -1.37
CDH8-213ENST00000584966 IFNAR1P17181 557 aa6.51□□□□□ -1.37
CDH8-213ENST00000584966 MAPK4P31152 587 aa6.51□□□□□ -1.37
CDH8-213ENST00000584966 KIF5BP33176 963 aa6.51□□□□□ -1.37
CDH8-213ENST00000584966 GNAQP50148 359 aa6.51□□□□□ -1.37
CDH8-213ENST00000584966 METAP2P50579 478 aaKnown RBP eCLIP6.51□□□□□ -1.37
CDH8-213ENST00000584966 GHRHRQ02643 423 aa6.51□□□□□ -1.37
CDH8-213ENST00000584966 GRB14Q14449 540 aa6.51□□□□□ -1.37
CDH8-213ENST00000584966 DSC3Q14574 896 aa6.51□□□□□ -1.37
CDH8-213ENST00000584966 PLS1Q14651 629 aa6.51□□□□□ -1.37
CDH8-213ENST00000584966 PPP2R5BQ15173 497 aa6.51□□□□□ -1.37
CDH8-213ENST00000584966 PKN1Q16512 942 aa6.51□□□□□ -1.37
CDH8-213ENST00000584966 CDC37Q16543 378 aaPredicted RBP6.51□□□□□ -1.37
CDH8-213ENST00000584966 CCDC174Q6PII3 467 aa6.51□□□□□ -1.37
CDH8-213ENST00000584966 SYNE3Q6ZMZ3 975 aa6.51□□□□□ -1.37
CDH8-213ENST00000584966 NECAB1Q8N987 351 aa6.51□□□□□ -1.37
CDH8-213ENST00000584966 GTF3C6Q969F1 213 aa6.51□□□□□ -1.37
CDH8-213ENST00000584966 ERO1AQ96HE7 468 aa6.51□□□□□ -1.37
CDH8-213ENST00000584966 FGD4Q96M96 766 aa6.51□□□□□ -1.37
CDH8-213ENST00000584966 FAM129BQ96TA1 746 aa6.51□□□□□ -1.37
CDH8-213ENST00000584966 MROH8Q9H579 483 aa6.51□□□□□ -1.37
CDH8-213ENST00000584966 AKTIPQ9H8T0 292 aa6.51□□□□□ -1.37
CDH8-213ENST00000584966 RBM28Q9NW13 759 aaKnown RBP6.51□□□□□ -1.37
CDH8-213ENST00000584966 SRRDQ9UH36 339 aa6.51□□□□□ -1.37
CDH8-213ENST00000584966 PTPN22Q9Y2R2 807 aa6.51□□□□□ -1.37
CDH8-213ENST00000584966 KIAA0100Q14667 2235 aaKnown RBP6.51□□□□□ -1.37
CDH8-213ENST00000584966 ASTN1O14525 1302 aa6.5□□□□□ -1.37
CDH8-213ENST00000584966 TNRC18O15417 2968 aaPredicted RBP6.5□□□□□ -1.37
CDH8-213ENST00000584966 SLC15A5A6NIM6 579 aa6.5□□□□□ -1.37
CDH8-213ENST00000584966 NFIBO00712 420 aa6.5□□□□□ -1.37
CDH8-213ENST00000584966 PRPF3O43395 683 aaKnown RBP6.5□□□□□ -1.37
CDH8-213ENST00000584966 STRNO43815 780 aa6.5□□□□□ -1.37
CDH8-213ENST00000584966 HOXC6P09630 235 aa6.5□□□□□ -1.37
CDH8-213ENST00000584966 FLT3LGP49771 235 aa6.5□□□□□ -1.37
CDH8-213ENST00000584966 FCGRTP55899 365 aa6.5□□□□□ -1.37
CDH8-213ENST00000584966 CCNA1P78396 465 aa6.5□□□□□ -1.37
CDH8-213ENST00000584966 FGD1P98174 961 aa6.5□□□□□ -1.37
CDH8-213ENST00000584966 PRKCZQ05513 592 aa6.5□□□□□ -1.37
CDH8-213ENST00000584966 IKQ13123 557 aaPredicted RBP6.5□□□□□ -1.37
CDH8-213ENST00000584966 STK3Q13188 491 aa6.5□□□□□ -1.37
CDH8-213ENST00000584966 ANKRD1Q15327 319 aa6.5□□□□□ -1.37
CDH8-213ENST00000584966 ZNF792Q3KQV3 632 aa6.5□□□□□ -1.37
CDH8-213ENST00000584966 TKFCQ3LXA3 575 aa6.5□□□□□ -1.37
CDH8-213ENST00000584966 FAM26DQ5JW98 314 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms