RNA–Protein interactions for RNA: ENST00000584856.1

PGAP3-210, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 4

Gene PGAP3, Length 538 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-210ENST00000584856 UBA7P41226 1012 aa12.46□□□□□ -0.41
PGAP3-210ENST00000584856 ZNF200P98182 395 aaPredicted RBP12.46□□□□□ -0.41
PGAP3-210ENST00000584856 TRIM71Q2Q1W2 868 aaKnown RBP12.46□□□□□ -0.41
PGAP3-210ENST00000584856 MTHFD1LQ6UB35 978 aa12.46□□□□□ -0.41
PGAP3-210ENST00000584856 NME8Q8N427 588 aa12.46□□□□□ -0.41
PGAP3-210ENST00000584856 SNX29Q8TEQ0 813 aa12.46□□□□□ -0.41
PGAP3-210ENST00000584856 TRIM43Q96BQ3 446 aaPredicted RBP12.46□□□□□ -0.41
PGAP3-210ENST00000584856 JPH2Q9BR39 696 aaPredicted RBP12.46□□□□□ -0.41
PGAP3-210ENST00000584856 NOC4LQ9BVI4 516 aaKnown RBP12.46□□□□□ -0.41
PGAP3-210ENST00000584856 NT5C3AQ9H0P0 336 aa12.46□□□□□ -0.41
PGAP3-210ENST00000584856 CYP26B1Q9NR63 512 aa12.46□□□□□ -0.41
PGAP3-210ENST00000584856 SEPT9Q9UHD8 586 aaPredicted RBP12.46□□□□□ -0.41
PGAP3-210ENST00000584856 IGKV6-21A0A0C4DH24 114 aa12.45□□□□□ -0.42
PGAP3-210ENST00000584856 GAS2O43903 313 aaKnown RBP12.45□□□□□ -0.42
PGAP3-210ENST00000584856 CUTAO60888 179 aa12.45□□□□□ -0.42
PGAP3-210ENST00000584856 MAFO75444 373 aaPredicted RBP12.45□□□□□ -0.42
PGAP3-210ENST00000584856 C22orf31O95567 290 aa12.45□□□□□ -0.42
PGAP3-210ENST00000584856 CYP2C9P11712 490 aa12.45□□□□□ -0.42
PGAP3-210ENST00000584856 RFC5P40937 340 aa12.45□□□□□ -0.42
PGAP3-210ENST00000584856 TBC1D8BQ0IIM8 1120 aa12.45□□□□□ -0.42
PGAP3-210ENST00000584856 SH3RF1Q7Z6J0 888 aa12.45□□□□□ -0.42
PGAP3-210ENST00000584856 RSPH3Q86UC2 560 aa12.45□□□□□ -0.42
PGAP3-210ENST00000584856 LINC01465Q8N7H1 131 aa12.45□□□□□ -0.42
PGAP3-210ENST00000584856 RETREG2Q8NC44 543 aa12.45□□□□□ -0.42
PGAP3-210ENST00000584856 PPP1R13LQ8WUF5 828 aa12.45□□□□□ -0.42
PGAP3-210ENST00000584856 DHX38Q92620 1227 aaKnown RBP12.45□□□□□ -0.42
PGAP3-210ENST00000584856 CSRNP2Q9H175 543 aa12.45□□□□□ -0.42
PGAP3-210ENST00000584856 HIPK3Q9H422 1215 aa12.45□□□□□ -0.42
PGAP3-210ENST00000584856 PP2D1A8MPX8 630 aa12.44□□□□□ -0.42
PGAP3-210ENST00000584856 RAG1P15918 1043 aa12.44□□□□□ -0.42
PGAP3-210ENST00000584856 TMOD1P28289 359 aa12.44□□□□□ -0.42
PGAP3-210ENST00000584856 CDC25AP30304 524 aa12.44□□□□□ -0.42
PGAP3-210ENST00000584856 RARRES1P49788 294 aa12.44□□□□□ -0.42
PGAP3-210ENST00000584856 IGBP1P78318 339 aa12.44□□□□□ -0.42
PGAP3-210ENST00000584856 CDC42EP1Q00587 391 aa12.44□□□□□ -0.42
PGAP3-210ENST00000584856 GRIN1Q05586 938 aa12.44□□□□□ -0.42
PGAP3-210ENST00000584856 FOXD4L6Q3SYB3 417 aaPredicted RBP12.44□□□□□ -0.42
PGAP3-210ENST00000584856 XKR9Q5GH70 373 aa12.44□□□□□ -0.42
PGAP3-210ENST00000584856 FAM26DQ5JW98 314 aa12.44□□□□□ -0.42
PGAP3-210ENST00000584856 AXDND1Q5T1B0 1012 aaPredicted RBP12.44□□□□□ -0.42
PGAP3-210ENST00000584856 MFSD5Q6N075 450 aa12.44□□□□□ -0.42
PGAP3-210ENST00000584856 POTEGQ6S5H5 508 aa12.44□□□□□ -0.42
PGAP3-210ENST00000584856 FOXD4L3Q6VB84 417 aaPredicted RBP12.44□□□□□ -0.42
PGAP3-210ENST00000584856 FAM43BQ6ZT52 329 aaPredicted RBP12.44□□□□□ -0.42
PGAP3-210ENST00000584856 CABP7Q86V35 215 aa12.44□□□□□ -0.42
PGAP3-210ENST00000584856 KIAA0319LQ8IZA0 1049 aa12.44□□□□□ -0.42
PGAP3-210ENST00000584856 LEO1Q8WVC0 666 aaPredicted RBP12.44□□□□□ -0.42
PGAP3-210ENST00000584856 TRAPPC12Q8WVT3 735 aa12.44□□□□□ -0.42
PGAP3-210ENST00000584856 CALML4Q96GE6 196 aa12.44□□□□□ -0.42
PGAP3-210ENST00000584856 CEP170P1Q96L14 293 aa12.44□□□□□ -0.42
PGAP3-210ENST00000584856 DHX33Q9H6R0 707 aaKnown RBP12.44□□□□□ -0.42
PGAP3-210ENST00000584856 PRDM5Q9NQX1 630 aaPredicted RBP12.44□□□□□ -0.42
PGAP3-210ENST00000584856 KIAA1024Q9UPX6 916 aa12.44□□□□□ -0.42
PGAP3-210ENST00000584856 DNM3Q9UQ16 869 aa12.44□□□□□ -0.42
PGAP3-210ENST00000584856 MYH9P35579 1960 aaKnown RBP12.43□□□□□ -0.42
PGAP3-210ENST00000584856 ZBTB39O15060 712 aa12.43□□□□□ -0.42
PGAP3-210ENST00000584856 DGAT1O75907 488 aa12.43□□□□□ -0.42
PGAP3-210ENST00000584856 EYA4O95677 639 aa12.43□□□□□ -0.42
PGAP3-210ENST00000584856 CKBP12277 381 aa12.43□□□□□ -0.42
PGAP3-210ENST00000584856 SELPP16109 830 aa12.43□□□□□ -0.42
PGAP3-210ENST00000584856 RFC2P35250 354 aa12.43□□□□□ -0.42
PGAP3-210ENST00000584856 TXLNAP40222 546 aa12.43□□□□□ -0.42
PGAP3-210ENST00000584856 ME1P48163 572 aa12.43□□□□□ -0.42
PGAP3-210ENST00000584856 NPEPPSP55786 919 aa12.43□□□□□ -0.42
PGAP3-210ENST00000584856 GRB10Q13322 594 aa12.43□□□□□ -0.42
PGAP3-210ENST00000584856 ECM1Q16610 540 aa12.43□□□□□ -0.42
PGAP3-210ENST00000584856 MTERF2Q49AM1 385 aa12.43□□□□□ -0.42
PGAP3-210ENST00000584856 TMEM119Q4V9L6 283 aa12.43□□□□□ -0.42
PGAP3-210ENST00000584856 PLA2G4FQ68DD2 849 aa12.43□□□□□ -0.42
PGAP3-210ENST00000584856 RUFY4Q6ZNE9 571 aa12.43□□□□□ -0.42
PGAP3-210ENST00000584856 TRMT1LQ7Z2T5 733 aaKnown RBP12.43□□□□□ -0.42
PGAP3-210ENST00000584856 PIGOQ8TEQ8 1089 aa12.43□□□□□ -0.42
PGAP3-210ENST00000584856 SLC7A3Q8WY07 619 aa12.43□□□□□ -0.42
PGAP3-210ENST00000584856 WNT8BQ93098 351 aa12.43□□□□□ -0.42
PGAP3-210ENST00000584856 SPATA32Q96LK8 384 aa12.43□□□□□ -0.42
PGAP3-210ENST00000584856 CLIC6Q96NY7 704 aa12.43□□□□□ -0.42
PGAP3-210ENST00000584856 PNMA5Q96PV4 448 aa12.43□□□□□ -0.42
PGAP3-210ENST00000584856 DDX19AQ9NUU7 478 aaKnown RBP12.43□□□□□ -0.42
PGAP3-210ENST00000584856 CCDC39Q9UFE4 941 aa12.43□□□□□ -0.42
PGAP3-210ENST00000584856 SQORQ9Y6N5 450 aa12.43□□□□□ -0.42
PGAP3-210ENST00000584856 TMEM150BA6NC51 233 aa12.42□□□□□ -0.42
PGAP3-210ENST00000584856 IQCF3P0C7M6 154 aa12.42□□□□□ -0.42
PGAP3-210ENST00000584856 ITGB8P26012 769 aa12.42□□□□□ -0.42
PGAP3-210ENST00000584856 THPOP40225 353 aa12.42□□□□□ -0.42
PGAP3-210ENST00000584856 DNM2P50570 870 aa12.42□□□□□ -0.42
PGAP3-210ENST00000584856 PRPF38BQ5VTL8 546 aaKnown RBP12.42□□□□□ -0.42
PGAP3-210ENST00000584856 IER5Q5VY09 327 aa12.42□□□□□ -0.42
PGAP3-210ENST00000584856 ADALQ6DHV7 355 aa12.42□□□□□ -0.42
PGAP3-210ENST00000584856 EFCAB12Q6NXP0 572 aa12.42□□□□□ -0.42
PGAP3-210ENST00000584856 TRAF7Q6Q0C0 670 aa12.42□□□□□ -0.42
PGAP3-210ENST00000584856 LRRC8DQ7L1W4 858 aa12.42□□□□□ -0.42
PGAP3-210ENST00000584856 TMEM199Q8N511 208 aa12.42□□□□□ -0.42
PGAP3-210ENST00000584856 METTL13Q8N6R0 699 aa12.42□□□□□ -0.42
PGAP3-210ENST00000584856 MCPH1Q8NEM0 835 aa12.42□□□□□ -0.42
PGAP3-210ENST00000584856 DNAJB3Q8WWF6 145 aa12.42□□□□□ -0.42
PGAP3-210ENST00000584856 SYMPKQ92797 1274 aaKnown RBP12.42□□□□□ -0.42
PGAP3-210ENST00000584856 EPSTI1Q96J88 318 aa12.42□□□□□ -0.42
PGAP3-210ENST00000584856 CDK5RAP3Q96JB5 506 aa12.42□□□□□ -0.42
PGAP3-210ENST00000584856 CCDC43Q96MW1 224 aaKnown RBP12.42□□□□□ -0.42
PGAP3-210ENST00000584856 MAP7D2Q96T17 732 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms