RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 IGBP1P78318 339 aa12.22□□□□□ -0.45
TOP3A-216ENST00000583804 GRB10Q13322 594 aa12.22□□□□□ -0.45
TOP3A-216ENST00000583804 ITGA7Q13683 1181 aa12.22□□□□□ -0.45
TOP3A-216ENST00000583804 LONRF3Q496Y0 759 aa12.22□□□□□ -0.45
TOP3A-216ENST00000583804 CCDC183Q5T5S1 534 aa12.22□□□□□ -0.45
TOP3A-216ENST00000583804 PLA2G4FQ68DD2 849 aa12.22□□□□□ -0.45
TOP3A-216ENST00000583804 OTUD6AQ7L8S5 288 aa12.22□□□□□ -0.45
TOP3A-216ENST00000583804 ENGASEQ8NFI3 743 aa12.22□□□□□ -0.45
TOP3A-216ENST00000583804 DIS3LQ8TF46 1054 aaKnown RBP12.22□□□□□ -0.45
TOP3A-216ENST00000583804 BBXQ8WY36 941 aaPredicted RBP12.22□□□□□ -0.45
TOP3A-216ENST00000583804 PAWRQ96IZ0 340 aaKnown RBP12.22□□□□□ -0.45
TOP3A-216ENST00000583804 SH2D3AQ9BRG2 576 aa12.22□□□□□ -0.45
TOP3A-216ENST00000583804 NUP62CLQ9H1M0 184 aa12.22□□□□□ -0.45
TOP3A-216ENST00000583804 DNM3Q9UQ16 869 aa12.22□□□□□ -0.45
TOP3A-216ENST00000583804 HPSEQ9Y251 543 aa12.22□□□□□ -0.45
TOP3A-216ENST00000583804 SYCE3A1L190 88 aa12.21□□□□□ -0.45
TOP3A-216ENST00000583804 E9PMD0 336 aa12.21□□□□□ -0.45
TOP3A-216ENST00000583804 STBD1O95210 358 aa12.21□□□□□ -0.45
TOP3A-216ENST00000583804 LYPLA2O95372 231 aa12.21□□□□□ -0.45
TOP3A-216ENST00000583804 SSBP05455 408 aaKnown RBP eCLIP12.21□□□□□ -0.45
TOP3A-216ENST00000583804 PRR29P0C7W0 189 aa12.21□□□□□ -0.45
TOP3A-216ENST00000583804 SMIM10L2AP0DMW4 78 aa12.21□□□□□ -0.45
TOP3A-216ENST00000583804 SMIM10L2BP0DMW5 78 aa12.21□□□□□ -0.45
TOP3A-216ENST00000583804 INSRRP14616 1297 aa12.21□□□□□ -0.45
TOP3A-216ENST00000583804 MUTP22033 750 aa12.21□□□□□ -0.45
TOP3A-216ENST00000583804 CASP1P29466 404 aa12.21□□□□□ -0.45
TOP3A-216ENST00000583804 STAT6P42226 847 aa12.21□□□□□ -0.45
TOP3A-216ENST00000583804 AFMP43652 599 aa12.21□□□□□ -0.45
TOP3A-216ENST00000583804 MNX1P50219 401 aaPredicted RBP12.21□□□□□ -0.45
TOP3A-216ENST00000583804 SOX10P56693 466 aa12.21□□□□□ -0.45
TOP3A-216ENST00000583804 PPFIA1Q13136 1202 aa12.21□□□□□ -0.45
TOP3A-216ENST00000583804 MTERF2Q49AM1 385 aa12.21□□□□□ -0.45
TOP3A-216ENST00000583804 XKR9Q5GH70 373 aa12.21□□□□□ -0.45
TOP3A-216ENST00000583804 HYIQ5T013 277 aa12.21□□□□□ -0.45
TOP3A-216ENST00000583804 ANO5Q75V66 913 aa12.21□□□□□ -0.45
TOP3A-216ENST00000583804 LRRC15Q8TF66 581 aa12.21□□□□□ -0.45
TOP3A-216ENST00000583804 CEP170P1Q96L14 293 aa12.21□□□□□ -0.45
TOP3A-216ENST00000583804 TNMDQ9H2S6 317 aa12.21□□□□□ -0.45
TOP3A-216ENST00000583804 CLSTN2Q9H4D0 955 aa12.21□□□□□ -0.45
TOP3A-216ENST00000583804 C11orf49Q9H6J7 331 aa12.21□□□□□ -0.45
TOP3A-216ENST00000583804 ANKEF1Q9NU02 776 aa12.21□□□□□ -0.45
TOP3A-216ENST00000583804 SETD4Q9NVD3 440 aa12.21□□□□□ -0.45
TOP3A-216ENST00000583804 HDAC6Q9UBN7 1215 aa12.21□□□□□ -0.45
TOP3A-216ENST00000583804 FRMPD3Q5JV73 1810 aa12.21□□□□□ -0.45
TOP3A-216ENST00000583804 A0A0U1RQG5 324 aaPredicted RBP12.21□□□□□ -0.46
TOP3A-216ENST00000583804 XRCC6P12956 609 aaKnown RBP eCLIP12.21□□□□□ -0.46
TOP3A-216ENST00000583804 ATN1P54259 1190 aaPredicted RBP12.21□□□□□ -0.46
TOP3A-216ENST00000583804 NPEPPSP55786 919 aa12.21□□□□□ -0.46
TOP3A-216ENST00000583804 GRIK4Q16099 956 aa12.21□□□□□ -0.46
TOP3A-216ENST00000583804 ZSCAN23Q3MJ62 389 aa12.21□□□□□ -0.46
TOP3A-216ENST00000583804 TMEM119Q4V9L6 283 aa12.21□□□□□ -0.46
TOP3A-216ENST00000583804 ZNF484Q5JVG2 852 aa12.21□□□□□ -0.46
TOP3A-216ENST00000583804 KCNK18Q7Z418 384 aa12.21□□□□□ -0.46
TOP3A-216ENST00000583804 NECAB2Q7Z6G3 386 aa12.21□□□□□ -0.46
TOP3A-216ENST00000583804 IQUBQ8NA54 791 aa12.21□□□□□ -0.46
TOP3A-216ENST00000583804 CNNM3Q8NE01 707 aa12.21□□□□□ -0.46
TOP3A-216ENST00000583804 TRAPPC12Q8WVT3 735 aa12.21□□□□□ -0.46
TOP3A-216ENST00000583804 SYAP1Q96A49 352 aaPredicted RBP12.21□□□□□ -0.46
TOP3A-216ENST00000583804 NIFKQ9BYG3 293 aaKnown RBP12.21□□□□□ -0.46
TOP3A-216ENST00000583804 BHMT2Q9H2M3 363 aa12.21□□□□□ -0.46
TOP3A-216ENST00000583804 GRIN2DO15399 1336 aa12.2□□□□□ -0.46
TOP3A-216ENST00000583804 KIAA0100Q14667 2235 aaKnown RBP12.2□□□□□ -0.46
TOP3A-216ENST00000583804 C17orf102A2RUQ5 167 aa12.2□□□□□ -0.46
TOP3A-216ENST00000583804 ARHGEF35A5YM69 484 aa12.2□□□□□ -0.46
TOP3A-216ENST00000583804 RRN3P2A6NIE6 340 aa12.2□□□□□ -0.46
TOP3A-216ENST00000583804 ACTN4O43707 911 aaKnown RBP12.2□□□□□ -0.46
TOP3A-216ENST00000583804 EYA4O95677 639 aa12.2□□□□□ -0.46
TOP3A-216ENST00000583804 PLA2G4BP0C869 781 aa12.2□□□□□ -0.46
TOP3A-216ENST00000583804 GNAT1P11488 350 aa12.2□□□□□ -0.46
TOP3A-216ENST00000583804 RARRES1P49788 294 aa12.2□□□□□ -0.46
TOP3A-216ENST00000583804 NFRKBQ6P4R8 1299 aa12.2□□□□□ -0.46
TOP3A-216ENST00000583804 KRBA2Q6ZNG9 492 aa12.2□□□□□ -0.46
TOP3A-216ENST00000583804 KCTD17Q8N5Z5 321 aa12.2□□□□□ -0.46
TOP3A-216ENST00000583804 PYM1Q9BRP8 204 aaKnown RBP12.2□□□□□ -0.46
TOP3A-216ENST00000583804 CYP26B1Q9NR63 512 aa12.2□□□□□ -0.46
TOP3A-216ENST00000583804 NRCAMQ92823 1304 aa12.19□□□□□ -0.46
TOP3A-216ENST00000583804 FAM237AA0A1B0GTK4 181 aa12.19□□□□□ -0.46
TOP3A-216ENST00000583804 GOLGA6L3A6NEY3 463 aa12.19□□□□□ -0.46
TOP3A-216ENST00000583804 ARVCFO00192 962 aa12.19□□□□□ -0.46
TOP3A-216ENST00000583804 COL6A1P12109 1028 aa12.19□□□□□ -0.46
TOP3A-216ENST00000583804 ZNF200P98182 395 aaPredicted RBP12.19□□□□□ -0.46
TOP3A-216ENST00000583804 TBC1D8BQ0IIM8 1120 aa12.19□□□□□ -0.46
TOP3A-216ENST00000583804 PNOCQ13519 176 aa12.19□□□□□ -0.46
TOP3A-216ENST00000583804 MCM6Q14566 821 aa12.19□□□□□ -0.46
TOP3A-216ENST00000583804 ISM2Q6H9L7 571 aa12.19□□□□□ -0.46
TOP3A-216ENST00000583804 SLC39A5Q6ZMH5 540 aa12.19□□□□□ -0.46
TOP3A-216ENST00000583804 CEP57L1Q8IYX8 460 aa12.19□□□□□ -0.46
TOP3A-216ENST00000583804 LMBR1Q8WVP7 490 aa12.19□□□□□ -0.46
TOP3A-216ENST00000583804 LARP4BQ92615 738 aaKnown RBP12.19□□□□□ -0.46
TOP3A-216ENST00000583804 RAD54LQ92698 747 aa12.19□□□□□ -0.46
TOP3A-216ENST00000583804 ZBTB10Q96DT7 871 aa12.19□□□□□ -0.46
TOP3A-216ENST00000583804 BLZF1Q9H2G9 400 aa12.19□□□□□ -0.46
TOP3A-216ENST00000583804 BMP2KQ9NSY1 1161 aaPredicted RBP12.19□□□□□ -0.46
TOP3A-216ENST00000583804 BLOC1S4Q9NUP1 217 aa12.19□□□□□ -0.46
TOP3A-216ENST00000583804 STK17AQ9UEE5 414 aa12.19□□□□□ -0.46
TOP3A-216ENST00000583804 DBR1Q9UK59 544 aaKnown RBP12.19□□□□□ -0.46
TOP3A-216ENST00000583804 NOD1Q9Y239 953 aa12.19□□□□□ -0.46
TOP3A-216ENST00000583804 MYH9P35579 1960 aaKnown RBP12.18□□□□□ -0.46
TOP3A-216ENST00000583804 ZBTB42B2RXF5 422 aa12.18□□□□□ -0.46
TOP3A-216ENST00000583804 BIN1O00499 593 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms