RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 TARBP2Q15633 366 aaKnown RBP15.72■□□□□ 0.11
GGA3-215ENST00000582821 UGCGQ16739 394 aa15.72■□□□□ 0.11
GGA3-215ENST00000582821 XKR3Q5GH77 459 aa15.72■□□□□ 0.11
GGA3-215ENST00000582821 FBXO47Q5MNV8 452 aa15.72■□□□□ 0.11
GGA3-215ENST00000582821 POTEDQ86YR6 584 aa15.72■□□□□ 0.11
GGA3-215ENST00000582821 USP38Q8NB14 1042 aa15.72■□□□□ 0.11
GGA3-215ENST00000582821 YBX2Q9Y2T7 364 aaKnown RBP15.72■□□□□ 0.11
GGA3-215ENST00000582821 KIF3AQ9Y496 699 aa15.72■□□□□ 0.11
GGA3-215ENST00000582821 CDY2AQ9Y6F7 541 aa15.72■□□□□ 0.11
GGA3-215ENST00000582821 M0QZ92 97 aa15.71■□□□□ 0.11
GGA3-215ENST00000582821 MARCH6O60337 910 aa15.71■□□□□ 0.11
GGA3-215ENST00000582821 P4HBP07237 508 aaKnown RBP15.71■□□□□ 0.11
GGA3-215ENST00000582821 RABGGTBP53611 331 aa15.71■□□□□ 0.11
GGA3-215ENST00000582821 PSMC5P62195 406 aa15.71■□□□□ 0.11
GGA3-215ENST00000582821 PRKCEQ02156 737 aa15.71■□□□□ 0.11
GGA3-215ENST00000582821 SPIRE1Q08AE8 756 aa15.71■□□□□ 0.11
GGA3-215ENST00000582821 ORC2Q13416 577 aaPredicted RBP15.71■□□□□ 0.11
GGA3-215ENST00000582821 LPIN1Q14693 890 aa15.71■□□□□ 0.11
GGA3-215ENST00000582821 EPHA7Q15375 998 aa15.71■□□□□ 0.11
GGA3-215ENST00000582821 ZNF710Q8N1W2 664 aa15.71■□□□□ 0.11
GGA3-215ENST00000582821 LINC01465Q8N7H1 131 aa15.71■□□□□ 0.11
GGA3-215ENST00000582821 MTMR9Q96QG7 549 aa15.71■□□□□ 0.11
GGA3-215ENST00000582821 CDX2Q99626 313 aaPredicted RBP15.71■□□□□ 0.11
GGA3-215ENST00000582821 IFIH1Q9BYX4 1025 aaKnown RBP15.71■□□□□ 0.11
GGA3-215ENST00000582821 CELF4Q9BZC1 486 aaKnown RBP15.71■□□□□ 0.11
GGA3-215ENST00000582821 FAM49AQ9H0Q0 323 aaPredicted RBP15.71■□□□□ 0.11
GGA3-215ENST00000582821 SLC28A3Q9HAS3 691 aa15.71■□□□□ 0.11
GGA3-215ENST00000582821 TRPV2Q9Y5S1 764 aa15.71■□□□□ 0.11
GGA3-215ENST00000582821 TTC3P53804 2025 aa15.71■□□□□ 0.11
GGA3-215ENST00000582821 WNT7AO00755 349 aa15.7■□□□□ 0.1
GGA3-215ENST00000582821 DKC1O60832 514 aaKnown RBP eCLIP15.7■□□□□ 0.1
GGA3-215ENST00000582821 GJB5O95377 273 aa15.7■□□□□ 0.1
GGA3-215ENST00000582821 U2AF2P26368 475 aaKnown RBP eCLIP15.7■□□□□ 0.13e-7■■□□□ 12.8
GGA3-215ENST00000582821 QARSP47897 775 aaKnown RBP15.7■□□□□ 0.1
GGA3-215ENST00000582821 TRAPPC10P48553 1259 aa15.7■□□□□ 0.1
GGA3-215ENST00000582821 DEFB103AP81534 67 aa15.7■□□□□ 0.1
GGA3-215ENST00000582821 CALCRLQ16602 461 aa15.7■□□□□ 0.1
GGA3-215ENST00000582821 TSHZ1Q6ZSZ6 1077 aa15.7■□□□□ 0.1
GGA3-215ENST00000582821 FAM161BQ96MY7 647 aa15.7■□□□□ 0.1
GGA3-215ENST00000582821 CEP89Q96ST8 783 aa15.7■□□□□ 0.1
GGA3-215ENST00000582821 NKX2-4Q9H2Z4 354 aa15.7■□□□□ 0.1
GGA3-215ENST00000582821 PCDHA12Q9UN75 941 aa15.7■□□□□ 0.1
GGA3-215ENST00000582821 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.69■□□□□ 0.1
GGA3-215ENST00000582821 NEMFO60524 1076 aa15.69■□□□□ 0.1
GGA3-215ENST00000582821 AMHP03971 560 aa15.69■□□□□ 0.1
GGA3-215ENST00000582821 GHRP10912 638 aa15.69■□□□□ 0.1
GGA3-215ENST00000582821 MYOGP15173 224 aa15.69■□□□□ 0.1
GGA3-215ENST00000582821 GRIN2CQ14957 1233 aa15.69■□□□□ 0.1
GGA3-215ENST00000582821 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.69■□□□□ 0.1
GGA3-215ENST00000582821 TRMT1LQ7Z2T5 733 aaKnown RBP15.69■□□□□ 0.1
GGA3-215ENST00000582821 NOSTRINQ8IVI9 506 aa15.69■□□□□ 0.1
GGA3-215ENST00000582821 RAD9AQ99638 391 aa15.69■□□□□ 0.1
GGA3-215ENST00000582821 AGO3Q9H9G7 860 aaKnown RBP15.69■□□□□ 0.1
GGA3-215ENST00000582821 IGKV6-21A0A0C4DH24 114 aa15.68■□□□□ 0.1
GGA3-215ENST00000582821 TMOD1P28289 359 aa15.68■□□□□ 0.1
GGA3-215ENST00000582821 TMEM62Q0P6H9 643 aa15.68■□□□□ 0.1
GGA3-215ENST00000582821 EFCAB12Q6NXP0 572 aa15.68■□□□□ 0.1
GGA3-215ENST00000582821 C4orf19Q8IY42 314 aa15.68■□□□□ 0.1
GGA3-215ENST00000582821 METTL13Q8N6R0 699 aa15.68■□□□□ 0.1
GGA3-215ENST00000582821 BANK1Q8NDB2 785 aa15.68■□□□□ 0.1
GGA3-215ENST00000582821 TOP1MTQ969P6 601 aa15.68■□□□□ 0.1
GGA3-215ENST00000582821 HSD17B14Q9BPX1 270 aa15.68■□□□□ 0.1
GGA3-215ENST00000582821 TTC12Q9H892 705 aaPredicted RBP15.68■□□□□ 0.1
GGA3-215ENST00000582821 PPME1Q9Y570 386 aa15.68■□□□□ 0.1
GGA3-215ENST00000582821 TRANK1O15050 2925 aa15.67■□□□□ 0.1
GGA3-215ENST00000582821 DDX11L8A8MPP1 907 aa15.67■□□□□ 0.1
GGA3-215ENST00000582821 ENPP3O14638 875 aa15.67■□□□□ 0.1
GGA3-215ENST00000582821 TLL1O43897 1013 aa15.67■□□□□ 0.1
GGA3-215ENST00000582821 GPR32O75388 356 aa15.67■□□□□ 0.1
GGA3-215ENST00000582821 SLITRK3O94933 977 aa15.67■□□□□ 0.1
GGA3-215ENST00000582821 TXKP42681 527 aa15.67■□□□□ 0.1
GGA3-215ENST00000582821 CRYBB1P53674 252 aaPredicted RBP15.67■□□□□ 0.1
GGA3-215ENST00000582821 HTRA4P83105 476 aaPredicted RBP15.67■□□□□ 0.1
GGA3-215ENST00000582821 CDC42EP1Q00587 391 aa15.67■□□□□ 0.1
GGA3-215ENST00000582821 TBC1D8BQ0IIM8 1120 aa15.67■□□□□ 0.1
GGA3-215ENST00000582821 CUL4AQ13619 759 aa15.67■□□□□ 0.1
GGA3-215ENST00000582821 GNL2Q13823 731 aaKnown RBP15.67■□□□□ 0.1
GGA3-215ENST00000582821 ODR4Q5SWX8 454 aa15.67■□□□□ 0.1
GGA3-215ENST00000582821 ANO5Q75V66 913 aa15.67■□□□□ 0.1
GGA3-215ENST00000582821 ZBED2Q9BTP6 218 aa15.67■□□□□ 0.1
GGA3-215ENST00000582821 FTHL17Q9BXU8 183 aa15.67■□□□□ 0.1
GGA3-215ENST00000582821 TMEM60Q9H2L4 133 aa15.67■□□□□ 0.1
GGA3-215ENST00000582821 ZSWIM4Q9H7M6 989 aa15.67■□□□□ 0.1
GGA3-215ENST00000582821 SEPT9Q9UHD8 586 aaPredicted RBP15.67■□□□□ 0.1
GGA3-215ENST00000582821 PADI3Q9ULW8 664 aa15.67■□□□□ 0.1
GGA3-215ENST00000582821 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.67■□□□□ 0.1
GGA3-215ENST00000582821 RBAK-RBAKDNI3L0D1 243 aa15.66■□□□□ 0.1
GGA3-215ENST00000582821 MAFO75444 373 aaPredicted RBP15.66■□□□□ 0.1
GGA3-215ENST00000582821 LYPLA2O95372 231 aa15.66■□□□□ 0.1
GGA3-215ENST00000582821 CA3P07451 260 aa15.66■□□□□ 0.1
GGA3-215ENST00000582821 ATP2B1P20020 1258 aa15.66■□□□□ 0.1
GGA3-215ENST00000582821 GJB2P29033 226 aa15.66■□□□□ 0.1
GGA3-215ENST00000582821 CD52P31358 61 aa15.66■□□□□ 0.1
GGA3-215ENST00000582821 MCM7P33993 719 aa15.66■□□□□ 0.1
GGA3-215ENST00000582821 PPP2R2DQ66LE6 453 aa15.66■□□□□ 0.1
GGA3-215ENST00000582821 NCAPH2Q6IBW4 605 aa15.66■□□□□ 0.1
GGA3-215ENST00000582821 TMCO2Q7Z6W1 182 aaPredicted RBP15.66■□□□□ 0.1
GGA3-215ENST00000582821 RTN4RL1Q86UN2 441 aaPredicted RBP15.66■□□□□ 0.1
GGA3-215ENST00000582821 EXOC8Q8IYI6 725 aa15.66■□□□□ 0.1
GGA3-215ENST00000582821 MYOCDQ8IZQ8 938 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms