RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 KBTBD4Q9NVX7 518 aa10.64□□□□□ -0.71
RFFL-210ENST00000582308 SEPT9Q9UHD8 586 aaPredicted RBP10.64□□□□□ -0.71
RFFL-210ENST00000582308 DBR1Q9UK59 544 aaKnown RBP10.64□□□□□ -0.71
RFFL-210ENST00000582308 ZNF215Q9UL58 517 aaPredicted RBP10.64□□□□□ -0.71
RFFL-210ENST00000582308 GRIN2DO15399 1336 aa10.63□□□□□ -0.71
RFFL-210ENST00000582308 MYMKA6NI61 221 aa10.63□□□□□ -0.71
RFFL-210ENST00000582308 HBP1O60381 514 aa10.63□□□□□ -0.71
RFFL-210ENST00000582308 KINO60870 393 aaKnown RBP10.63□□□□□ -0.71
RFFL-210ENST00000582308 SGPL1O95470 568 aa10.63□□□□□ -0.71
RFFL-210ENST00000582308 SSBP05455 408 aaKnown RBP eCLIP10.63□□□□□ -0.71
RFFL-210ENST00000582308 AFMP43652 599 aa10.63□□□□□ -0.71
RFFL-210ENST00000582308 RARRES1P49788 294 aa10.63□□□□□ -0.71
RFFL-210ENST00000582308 MNX1P50219 401 aaPredicted RBP10.63□□□□□ -0.71
RFFL-210ENST00000582308 MDM2Q00987 491 aaPredicted RBP10.63□□□□□ -0.71
RFFL-210ENST00000582308 DHX8Q14562 1220 aaKnown RBP10.63□□□□□ -0.71
RFFL-210ENST00000582308 MFSD10Q14728 455 aa10.63□□□□□ -0.71
RFFL-210ENST00000582308 KIAA0753Q2KHM9 967 aa10.63□□□□□ -0.71
RFFL-210ENST00000582308 ARSHQ5FYA8 562 aa10.63□□□□□ -0.71
RFFL-210ENST00000582308 XKR9Q5GH70 373 aa10.63□□□□□ -0.71
RFFL-210ENST00000582308 SV2BQ7L1I2 683 aa10.63□□□□□ -0.71
RFFL-210ENST00000582308 OTUD6AQ7L8S5 288 aa10.63□□□□□ -0.71
RFFL-210ENST00000582308 SH3RF1Q7Z6J0 888 aa10.63□□□□□ -0.71
RFFL-210ENST00000582308 CEP57L1Q8IYX8 460 aa10.63□□□□□ -0.71
RFFL-210ENST00000582308 SYT2Q8N9I0 419 aaPredicted RBP10.63□□□□□ -0.71
RFFL-210ENST00000582308 CNNM3Q8NE01 707 aa10.63□□□□□ -0.71
RFFL-210ENST00000582308 U2AF1L4Q8WU68 220 aaKnown RBP10.63□□□□□ -0.71
RFFL-210ENST00000582308 BBXQ8WY36 941 aaPredicted RBP10.63□□□□□ -0.71
RFFL-210ENST00000582308 CEP170P1Q96L14 293 aa10.63□□□□□ -0.71
RFFL-210ENST00000582308 RUSC1Q9BVN2 902 aa10.63□□□□□ -0.71
RFFL-210ENST00000582308 CYP26B1Q9NR63 512 aa10.63□□□□□ -0.71
RFFL-210ENST00000582308 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.62□□□□□ -0.71
RFFL-210ENST00000582308 ARHGEF35A5YM69 484 aa10.62□□□□□ -0.71
RFFL-210ENST00000582308 MOXD2PA6NHM9 499 aa10.62□□□□□ -0.71
RFFL-210ENST00000582308 DNM1LO00429 736 aa10.62□□□□□ -0.71
RFFL-210ENST00000582308 TRAK2O60296 914 aa10.62□□□□□ -0.71
RFFL-210ENST00000582308 TFRCP02786 760 aaKnown RBP10.62□□□□□ -0.71
RFFL-210ENST00000582308 SMIM10L2AP0DMW4 78 aa10.62□□□□□ -0.71
RFFL-210ENST00000582308 SMIM10L2BP0DMW5 78 aa10.62□□□□□ -0.71
RFFL-210ENST00000582308 INSRRP14616 1297 aa10.62□□□□□ -0.71
RFFL-210ENST00000582308 CYP11B2P19099 503 aa10.62□□□□□ -0.71
RFFL-210ENST00000582308 CASP1P29466 404 aa10.62□□□□□ -0.71
RFFL-210ENST00000582308 GJA8P48165 433 aa10.62□□□□□ -0.71
RFFL-210ENST00000582308 CHMP4BP1P59074 171 aa10.62□□□□□ -0.71
RFFL-210ENST00000582308 HIC1Q14526 733 aa10.62□□□□□ -0.71
RFFL-210ENST00000582308 KLHL40Q2TBA0 621 aa10.62□□□□□ -0.71
RFFL-210ENST00000582308 NBPF20Q3BBV1 942 aa10.62□□□□□ -0.71
RFFL-210ENST00000582308 MTERF2Q49AM1 385 aa10.62□□□□□ -0.71
RFFL-210ENST00000582308 RINT1Q6NUQ1 792 aa10.62□□□□□ -0.71
RFFL-210ENST00000582308 C1orf186Q6ZWK4 172 aa10.62□□□□□ -0.71
RFFL-210ENST00000582308 GPBP1Q86WP2 473 aa10.62□□□□□ -0.71
RFFL-210ENST00000582308 TRAPPC12Q8WVT3 735 aa10.62□□□□□ -0.71
RFFL-210ENST00000582308 KATNAL1Q9BW62 490 aa10.62□□□□□ -0.71
RFFL-210ENST00000582308 TNMDQ9H2S6 317 aa10.62□□□□□ -0.71
RFFL-210ENST00000582308 CLSTN2Q9H4D0 955 aa10.62□□□□□ -0.71
RFFL-210ENST00000582308 MAGEF1Q9HAY2 307 aa10.62□□□□□ -0.71
RFFL-210ENST00000582308 PDLIM7Q9NR12 457 aa10.62□□□□□ -0.71
RFFL-210ENST00000582308 PHF24Q9UPV7 400 aa10.62□□□□□ -0.71
RFFL-210ENST00000582308 TRPC6Q9Y210 931 aa10.62□□□□□ -0.71
RFFL-210ENST00000582308 NPHP3-ACAD11A0A0J9YXS1 232 aa10.61□□□□□ -0.71
RFFL-210ENST00000582308 A0A1W2PQ45 241 aaPredicted RBP10.61□□□□□ -0.71
RFFL-210ENST00000582308 A0A1W2PQY0 241 aa10.61□□□□□ -0.71
RFFL-210ENST00000582308 KBTBD13C9JR72 458 aa10.61□□□□□ -0.71
RFFL-210ENST00000582308 CABYRO75952 493 aa10.61□□□□□ -0.71
RFFL-210ENST00000582308 PRR29P0C7W0 189 aa10.61□□□□□ -0.71
RFFL-210ENST00000582308 ADAM17P78536 824 aa10.61□□□□□ -0.71
RFFL-210ENST00000582308 PPFIA1Q13136 1202 aa10.61□□□□□ -0.71
RFFL-210ENST00000582308 PNOCQ13519 176 aa10.61□□□□□ -0.71
RFFL-210ENST00000582308 GRIK4Q16099 956 aa10.61□□□□□ -0.71
RFFL-210ENST00000582308 CAMK4Q16566 473 aa10.61□□□□□ -0.71
RFFL-210ENST00000582308 SKOR2Q2VWA4 1001 aaPredicted RBP10.61□□□□□ -0.71
RFFL-210ENST00000582308 ZNF484Q5JVG2 852 aa10.61□□□□□ -0.71
RFFL-210ENST00000582308 MARCH8Q5T0T0 291 aa10.61□□□□□ -0.71
RFFL-210ENST00000582308 KANK3Q6NY19 840 aa10.61□□□□□ -0.71
RFFL-210ENST00000582308 PADI6Q6TGC4 694 aa10.61□□□□□ -0.71
RFFL-210ENST00000582308 ELOA2Q8IYF1 753 aaPredicted RBP10.61□□□□□ -0.71
RFFL-210ENST00000582308 ZBTB10Q96DT7 871 aa10.61□□□□□ -0.71
RFFL-210ENST00000582308 C7orf25Q9BPX7 421 aa10.61□□□□□ -0.71
RFFL-210ENST00000582308 TRIM9Q9C026 710 aa10.61□□□□□ -0.71
RFFL-210ENST00000582308 DHX33Q9H6R0 707 aaKnown RBP10.61□□□□□ -0.71
RFFL-210ENST00000582308 POLD4Q9HCU8 107 aa10.61□□□□□ -0.71
RFFL-210ENST00000582308 SETD4Q9NVD3 440 aa10.61□□□□□ -0.71
RFFL-210ENST00000582308 TMEM63CQ9P1W3 806 aa10.61□□□□□ -0.71
RFFL-210ENST00000582308 HDAC6Q9UBN7 1215 aa10.61□□□□□ -0.71
RFFL-210ENST00000582308 COL1A2P08123 1366 aa10.61□□□□□ -0.71
RFFL-210ENST00000582308 RRN3P2A6NIE6 340 aa10.6□□□□□ -0.71
RFFL-210ENST00000582308 GTPBP6O43824 516 aaPredicted RBP10.6□□□□□ -0.71
RFFL-210ENST00000582308 USO1O60763 962 aaKnown RBP10.6□□□□□ -0.71
RFFL-210ENST00000582308 C22orf31O95567 290 aa10.6□□□□□ -0.71
RFFL-210ENST00000582308 KLRC1P26715 233 aa10.6□□□□□ -0.71
RFFL-210ENST00000582308 HOXC8P31273 242 aa10.6□□□□□ -0.71
RFFL-210ENST00000582308 SOX10P56693 466 aa10.6□□□□□ -0.71
RFFL-210ENST00000582308 IGBP1P78318 339 aa10.6□□□□□ -0.71
RFFL-210ENST00000582308 ZNF200P98182 395 aaPredicted RBP10.6□□□□□ -0.71
RFFL-210ENST00000582308 AMPD3Q01432 767 aa10.6□□□□□ -0.71
RFFL-210ENST00000582308 RAD51AP2Q09MP3 1159 aa10.6□□□□□ -0.71
RFFL-210ENST00000582308 DPYDQ12882 1025 aa10.6□□□□□ -0.71
RFFL-210ENST00000582308 CUL4BQ13620 913 aa10.6□□□□□ -0.71
RFFL-210ENST00000582308 ITGA7Q13683 1181 aa10.6□□□□□ -0.71
RFFL-210ENST00000582308 GIT2Q14161 759 aa10.6□□□□□ -0.71
RFFL-210ENST00000582308 POSTNQ15063 836 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms