RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 MYCT1Q8N699 235 aa10.27□□□□□ -0.77
SS18-220ENST00000582092 DNERQ8NFT8 737 aa10.27□□□□□ -0.77
SS18-220ENST00000582092 PIGOQ8TEQ8 1089 aa10.27□□□□□ -0.77
SS18-220ENST00000582092 GPRASP2Q96D09 838 aa10.27□□□□□ -0.77
SS18-220ENST00000582092 DEFB118Q96PH6 123 aa10.27□□□□□ -0.77
SS18-220ENST00000582092 PDCD2LQ9BRP1 358 aa10.27□□□□□ -0.77
SS18-220ENST00000582092 MOV10L1Q9BXT6 1211 aaKnown RBP10.27□□□□□ -0.77
SS18-220ENST00000582092 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.27□□□□□ -0.77
SS18-220ENST00000582092 HSD3B7Q9H2F3 369 aa10.27□□□□□ -0.77
SS18-220ENST00000582092 MRPL44Q9H9J2 332 aaKnown RBP10.27□□□□□ -0.77
SS18-220ENST00000582092 KCND2Q9NZV8 630 aa10.27□□□□□ -0.77
SS18-220ENST00000582092 COL20A1Q9P218 1284 aa10.27□□□□□ -0.77
SS18-220ENST00000582092 RIPK3Q9Y572 518 aa10.27□□□□□ -0.77
SS18-220ENST00000582092 ZNF236Q9UL36 1845 aa10.26□□□□□ -0.77
SS18-220ENST00000582092 NPHP3-ACAD11A0A0J9YXS1 232 aa10.26□□□□□ -0.77
SS18-220ENST00000582092 WDR64B1ANS9 1081 aa10.26□□□□□ -0.77
SS18-220ENST00000582092 POTEB2H3BUK9 544 aa10.26□□□□□ -0.77
SS18-220ENST00000582092 MSCO60682 206 aa10.26□□□□□ -0.77
SS18-220ENST00000582092 PEX10O60683 326 aa10.26□□□□□ -0.77
SS18-220ENST00000582092 SLITRK3O94933 977 aa10.26□□□□□ -0.77
SS18-220ENST00000582092 HOXC6P09630 235 aa10.26□□□□□ -0.77
SS18-220ENST00000582092 PRKAR2AP13861 404 aaKnown RBP10.26□□□□□ -0.77
SS18-220ENST00000582092 ITGB5P18084 799 aa10.26□□□□□ -0.77
SS18-220ENST00000582092 RPL13P26373 211 aaKnown RBP10.26□□□□□ -0.77
SS18-220ENST00000582092 QARSP47897 775 aaKnown RBP10.26□□□□□ -0.77
SS18-220ENST00000582092 DNM2P50570 870 aa10.26□□□□□ -0.77
SS18-220ENST00000582092 PSMC6P62333 389 aa10.26□□□□□ -0.77
SS18-220ENST00000582092 FKBP3Q00688 224 aaKnown RBP10.26□□□□□ -0.77
SS18-220ENST00000582092 LRMPQ12912 555 aa10.26□□□□□ -0.77
SS18-220ENST00000582092 GRB14Q14449 540 aa10.26□□□□□ -0.77
SS18-220ENST00000582092 KCTD2Q14681 263 aa10.26□□□□□ -0.77
SS18-220ENST00000582092 LRRC41Q15345 812 aa10.26□□□□□ -0.77
SS18-220ENST00000582092 PRPF38BQ5VTL8 546 aaKnown RBP10.26□□□□□ -0.77
SS18-220ENST00000582092 CENPPQ6IPU0 288 aa10.26□□□□□ -0.77
SS18-220ENST00000582092 PPP4R3CPQ6ZMV5 832 aa10.26□□□□□ -0.77
SS18-220ENST00000582092 RIOX2Q8IUF8 465 aa10.26□□□□□ -0.77
SS18-220ENST00000582092 CNGA4Q8IV77 575 aa10.26□□□□□ -0.77
SS18-220ENST00000582092 ANKLE1Q8NAG6 615 aa10.26□□□□□ -0.77
SS18-220ENST00000582092 BANK1Q8NDB2 785 aa10.26□□□□□ -0.77
SS18-220ENST00000582092 ZNF397Q8NF99 534 aaPredicted RBP10.26□□□□□ -0.77
SS18-220ENST00000582092 REPS2Q8NFH8 660 aa10.26□□□□□ -0.77
SS18-220ENST00000582092 RDM1Q8NG50 284 aa10.26□□□□□ -0.77
SS18-220ENST00000582092 KIAA1524Q8TCG1 905 aa10.26□□□□□ -0.77
SS18-220ENST00000582092 LRRC15Q8TF66 581 aa10.26□□□□□ -0.77
SS18-220ENST00000582092 CPLX3Q8WVH0 158 aa10.26□□□□□ -0.77
SS18-220ENST00000582092 TRIB2Q92519 343 aa10.26□□□□□ -0.77
SS18-220ENST00000582092 USP6NLQ92738 828 aa10.26□□□□□ -0.77
SS18-220ENST00000582092 DNAJC19Q96DA6 116 aa10.26□□□□□ -0.77
SS18-220ENST00000582092 HSD17B14Q9BPX1 270 aa10.26□□□□□ -0.77
SS18-220ENST00000582092 LXNQ9BS40 222 aa10.26□□□□□ -0.77
SS18-220ENST00000582092 TUBGCP2Q9BSJ2 902 aa10.26□□□□□ -0.77
SS18-220ENST00000582092 NOC4LQ9BVI4 516 aaKnown RBP10.26□□□□□ -0.77
SS18-220ENST00000582092 NUP58Q9BVL2 599 aa10.26□□□□□ -0.77
SS18-220ENST00000582092 KCNF1Q9H3M0 494 aa10.26□□□□□ -0.77
SS18-220ENST00000582092 PAK6Q9NQU5 681 aaPredicted RBP10.26□□□□□ -0.77
SS18-220ENST00000582092 ZNHIT6Q9NWK9 470 aaKnown RBP10.26□□□□□ -0.77
SS18-220ENST00000582092 CYP39A1Q9NYL5 469 aa10.26□□□□□ -0.77
SS18-220ENST00000582092 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.26□□□□□ -0.77
SS18-220ENST00000582092 SEL1LQ9UBV2 794 aa10.26□□□□□ -0.77
SS18-220ENST00000582092 ZNF214Q9UL59 606 aaPredicted RBP10.26□□□□□ -0.77
SS18-220ENST00000582092 LRRC10BA6NIK2 292 aa10.25□□□□□ -0.77
SS18-220ENST00000582092 CETN3O15182 167 aa10.25□□□□□ -0.77
SS18-220ENST00000582092 ZSCAN12O43309 604 aa10.25□□□□□ -0.77
SS18-220ENST00000582092 FARP2O94887 1054 aaPredicted RBP10.25□□□□□ -0.77
SS18-220ENST00000582092 GCNT3O95395 438 aa10.25□□□□□ -0.77
SS18-220ENST00000582092 PSAPP07602 524 aa10.25□□□□□ -0.77
SS18-220ENST00000582092 ADORA2AP29274 412 aa10.25□□□□□ -0.77
SS18-220ENST00000582092 PSMC5P62195 406 aa10.25□□□□□ -0.77
SS18-220ENST00000582092 MRPS9P82933 396 aaKnown RBP10.25□□□□□ -0.77
SS18-220ENST00000582092 CACNB1Q02641 598 aaPredicted RBP10.25□□□□□ -0.77
SS18-220ENST00000582092 TBC1D8BQ0IIM8 1120 aa10.25□□□□□ -0.77
SS18-220ENST00000582092 GIT2Q14161 759 aa10.25□□□□□ -0.77
SS18-220ENST00000582092 RINT1Q6NUQ1 792 aa10.25□□□□□ -0.77
SS18-220ENST00000582092 TTI2Q6NXR4 508 aa10.25□□□□□ -0.77
SS18-220ENST00000582092 MIS18BP1Q6P0N0 1132 aa10.25□□□□□ -0.77
SS18-220ENST00000582092 VSIG10LQ86VR7 867 aa10.25□□□□□ -0.77
SS18-220ENST00000582092 NELFCDQ8IXH7 590 aa10.25□□□□□ -0.77
SS18-220ENST00000582092 SYCP3Q8IZU3 236 aa10.25□□□□□ -0.77
SS18-220ENST00000582092 KIAA0895Q8NCT3 520 aa10.25□□□□□ -0.77
SS18-220ENST00000582092 IL31RAQ8NI17 732 aa10.25□□□□□ -0.77
SS18-220ENST00000582092 HPS3Q969F9 1004 aa10.25□□□□□ -0.77
SS18-220ENST00000582092 IQCDQ96DY2 449 aa10.25□□□□□ -0.77
SS18-220ENST00000582092 CNOT6LQ96LI5 555 aaKnown RBP10.25□□□□□ -0.77
SS18-220ENST00000582092 MMP19Q99542 508 aa10.25□□□□□ -0.77
SS18-220ENST00000582092 BAG1Q99933 345 aaPredicted RBP10.25□□□□□ -0.77
SS18-220ENST00000582092 REEP2Q9BRK0 252 aa10.25□□□□□ -0.77
SS18-220ENST00000582092 PARVGQ9HBI0 331 aa10.25□□□□□ -0.77
SS18-220ENST00000582092 A1CFQ9NQ94 594 aaKnown RBP10.25□□□□□ -0.77
SS18-220ENST00000582092 ODF2LQ9ULJ1 636 aa10.25□□□□□ -0.77
SS18-220ENST00000582092 PYCARDQ9ULZ3 195 aa10.25□□□□□ -0.77
SS18-220ENST00000582092 PCDHB13Q9Y5F0 798 aa10.25□□□□□ -0.77
SS18-220ENST00000582092 SMCHD1A6NHR9 2005 aa10.24□□□□□ -0.77
SS18-220ENST00000582092 KIF2AO00139 706 aaPredicted RBP10.24□□□□□ -0.77
SS18-220ENST00000582092 BACH1O14867 736 aa10.24□□□□□ -0.77
SS18-220ENST00000582092 TEX33O43247 280 aa10.24□□□□□ -0.77
SS18-220ENST00000582092 OFD1O75665 1012 aa10.24□□□□□ -0.77
SS18-220ENST00000582092 EIF3JO75822 258 aaKnown RBP10.24□□□□□ -0.77
SS18-220ENST00000582092 CNGA1P29973 690 aa10.24□□□□□ -0.77
SS18-220ENST00000582092 ARID5BQ14865 1188 aa10.24□□□□□ -0.77
SS18-220ENST00000582092 ARSHQ5FYA8 562 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms