RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 SLC24A5Q71RS6 500 aa14.6□□□□□ -0.07
SS18-219ENST00000581570 NKD2Q969F2 451 aaPredicted RBP14.6□□□□□ -0.07
SS18-219ENST00000581570 TCF25Q9BQ70 676 aa14.6□□□□□ -0.07
SS18-219ENST00000581570 OSBPL3Q9H4L5 887 aa14.6□□□□□ -0.07
SS18-219ENST00000581570 CWH43Q9H720 699 aa14.6□□□□□ -0.07
SS18-219ENST00000581570 JPH1Q9HDC5 661 aaPredicted RBP14.6□□□□□ -0.07
SS18-219ENST00000581570 NGRNQ9NPE2 291 aaKnown RBP14.6□□□□□ -0.07
SS18-219ENST00000581570 JADE2Q9NQC1 790 aa14.6□□□□□ -0.07
SS18-219ENST00000581570 ENTPD7Q9NQZ7 604 aa14.6□□□□□ -0.07
SS18-219ENST00000581570 GINS2Q9Y248 185 aa14.6□□□□□ -0.07
SS18-219ENST00000581570 NOC2LQ9Y3T9 749 aaKnown RBP14.6□□□□□ -0.07
SS18-219ENST00000581570 HIDE1A8MVS5 230 aa14.59□□□□□ -0.07
SS18-219ENST00000581570 C2CD4DB7Z1M9 353 aa14.59□□□□□ -0.07
SS18-219ENST00000581570 C9IYK1 514 aa14.59□□□□□ -0.07
SS18-219ENST00000581570 ID4P47928 161 aa14.59□□□□□ -0.07
SS18-219ENST00000581570 STAT5BP51692 787 aa14.59□□□□□ -0.07
SS18-219ENST00000581570 SART3Q15020 963 aaKnown RBP14.59□□□□□ -0.07
SS18-219ENST00000581570 TPRNQ4KMQ1 711 aa14.59□□□□□ -0.07
SS18-219ENST00000581570 ODR4Q5SWX8 454 aa14.59□□□□□ -0.07
SS18-219ENST00000581570 ASTLQ6HA08 431 aaPredicted RBP14.59□□□□□ -0.07
SS18-219ENST00000581570 CES5AQ6NT32 575 aa14.59□□□□□ -0.07
SS18-219ENST00000581570 MTHFD1LQ6UB35 978 aa14.59□□□□□ -0.07
SS18-219ENST00000581570 PLPPR4Q7Z2D5 763 aa14.59□□□□□ -0.07
SS18-219ENST00000581570 FRMD5Q7Z6J6 570 aa14.59□□□□□ -0.07
SS18-219ENST00000581570 CASP10Q92851 521 aa14.59□□□□□ -0.07
SS18-219ENST00000581570 SPZ1Q9BXG8 430 aa14.59□□□□□ -0.07
SS18-219ENST00000581570 PSTPIP2Q9H939 334 aa14.59□□□□□ -0.07
SS18-219ENST00000581570 CDHR5Q9HBB8 845 aa14.59□□□□□ -0.07
SS18-219ENST00000581570 ATP6V0A4Q9HBG4 840 aa14.59□□□□□ -0.07
SS18-219ENST00000581570 SLC9A2Q9UBY0 812 aa14.59□□□□□ -0.07
SS18-219ENST00000581570 SEC63Q9UGP8 760 aaKnown RBP14.59□□□□□ -0.07
SS18-219ENST00000581570 CDH22Q9UJ99 828 aa14.59□□□□□ -0.07
SS18-219ENST00000581570 ST3GAL5Q9UNP4 418 aa14.59□□□□□ -0.07
SS18-219ENST00000581570 KIAA1671Q9BY89 1806 aa14.59□□□□□ -0.07
SS18-219ENST00000581570 PLXNA3P51805 1871 aa14.59□□□□□ -0.07
SS18-219ENST00000581570 GPR182O15218 404 aa14.58□□□□□ -0.08
SS18-219ENST00000581570 FGFR1P11362 822 aa14.58□□□□□ -0.08
SS18-219ENST00000581570 KLRC1P26715 233 aa14.58□□□□□ -0.08
SS18-219ENST00000581570 TMC7Q7Z402 723 aa14.58□□□□□ -0.08
SS18-219ENST00000581570 RALYLQ86SE5 291 aaKnown RBP14.58□□□□□ -0.08
SS18-219ENST00000581570 ADSSL1Q8N142 457 aa14.58□□□□□ -0.08
SS18-219ENST00000581570 NECTIN4Q96NY8 510 aa14.58□□□□□ -0.08
SS18-219ENST00000581570 ADAM7Q9H2U9 754 aa14.58□□□□□ -0.08
SS18-219ENST00000581570 MFSD1Q9H3U5 465 aa14.58□□□□□ -0.08
SS18-219ENST00000581570 POMKQ9H5K3 350 aa14.58□□□□□ -0.08
SS18-219ENST00000581570 TMEM161AQ9NX61 479 aa14.58□□□□□ -0.08
SS18-219ENST00000581570 PLXNA4Q9HCM2 1894 aa14.58□□□□□ -0.08
SS18-219ENST00000581570 CACNA1HO95180 2353 aa14.58□□□□□ -0.08
SS18-219ENST00000581570 BAZ2BQ9UIF8 2168 aaKnown RBP14.57□□□□□ -0.08
SS18-219ENST00000581570 PTPRZ1P23471 2315 aaPredicted RBP14.57□□□□□ -0.08
SS18-219ENST00000581570 SPDYE3A6NKU9 549 aa14.57□□□□□ -0.08
SS18-219ENST00000581570 CYP21A2P08686 494 aa14.57□□□□□ -0.08
SS18-219ENST00000581570 PDE4AP27815 886 aa14.57□□□□□ -0.08
SS18-219ENST00000581570 SMARCA1P28370 1054 aa14.57□□□□□ -0.08
SS18-219ENST00000581570 ACTR2P61160 394 aa14.57□□□□□ -0.08
SS18-219ENST00000581570 FAM189BP81408 668 aa14.57□□□□□ -0.08
SS18-219ENST00000581570 KRT17Q04695 432 aa14.57□□□□□ -0.08
SS18-219ENST00000581570 ITIH3Q06033 890 aa14.57□□□□□ -0.08
SS18-219ENST00000581570 UBE2SQ16763 222 aa14.57□□□□□ -0.08
SS18-219ENST00000581570 MCTP2Q6DN12 878 aa14.57□□□□□ -0.08
SS18-219ENST00000581570 CHD1LQ86WJ1 897 aa14.57□□□□□ -0.08
SS18-219ENST00000581570 CTCFLQ8NI51 663 aaPredicted RBP14.57□□□□□ -0.08
SS18-219ENST00000581570 TMEM40Q8WWA1 233 aa14.57□□□□□ -0.08
SS18-219ENST00000581570 MAP3K14Q99558 947 aa14.57□□□□□ -0.08
SS18-219ENST00000581570 SDF4Q9BRK5 362 aa14.57□□□□□ -0.08
SS18-219ENST00000581570 IL25Q9H293 177 aa14.57□□□□□ -0.08
SS18-219ENST00000581570 SMOC2Q9H3U7 446 aa14.57□□□□□ -0.08
SS18-219ENST00000581570 ELAC1Q9H777 363 aaKnown RBP14.57□□□□□ -0.08
SS18-219ENST00000581570 PCDHA6Q9UN73 950 aa14.57□□□□□ -0.08
SS18-219ENST00000581570 PCDHA8Q9Y5H6 950 aa14.57□□□□□ -0.08
SS18-219ENST00000581570 ASGR2P07307 311 aa14.56□□□□□ -0.08
SS18-219ENST00000581570 KIF5BP33176 963 aa14.56□□□□□ -0.08
SS18-219ENST00000581570 MTHFRP42898 656 aa14.56□□□□□ -0.08
SS18-219ENST00000581570 CLCN5P51795 746 aa14.56□□□□□ -0.08
SS18-219ENST00000581570 KCNT2Q6UVM3 1135 aa14.56□□□□□ -0.08
SS18-219ENST00000581570 KIAA0319LQ8IZA0 1049 aa14.56□□□□□ -0.08
SS18-219ENST00000581570 NCOA7Q8NI08 942 aa14.56□□□□□ -0.08
SS18-219ENST00000581570 IGDCC4Q8TDY8 1250 aa14.56□□□□□ -0.08
SS18-219ENST00000581570 ZNF558Q96NG5 402 aa14.56□□□□□ -0.08
SS18-219ENST00000581570 MXRA8Q9BRK3 442 aa14.56□□□□□ -0.08
SS18-219ENST00000581570 LZTS2Q9BRK4 669 aa14.56□□□□□ -0.08
SS18-219ENST00000581570 TMEM117Q9H0C3 514 aa14.56□□□□□ -0.08
SS18-219ENST00000581570 KCNH7Q9NS40 1196 aa14.56□□□□□ -0.08
SS18-219ENST00000581570 HCFC2Q9Y5Z7 792 aa14.56□□□□□ -0.08
SS18-219ENST00000581570 E7EWF7 191 aa14.55□□□□□ -0.08
SS18-219ENST00000581570 HBP1O60381 514 aa14.55□□□□□ -0.08
SS18-219ENST00000581570 PPM1AP35813 382 aa14.55□□□□□ -0.08
SS18-219ENST00000581570 GNAQP50148 359 aa14.55□□□□□ -0.08
SS18-219ENST00000581570 SLC26A2P50443 739 aa14.55□□□□□ -0.08
SS18-219ENST00000581570 SMC1AQ14683 1233 aaKnown RBP14.55□□□□□ -0.08
SS18-219ENST00000581570 LRRC55Q6ZSA7 311 aa14.55□□□□□ -0.08
SS18-219ENST00000581570 SMC5Q8IY18 1101 aa14.55□□□□□ -0.08
SS18-219ENST00000581570 ZNF654Q8IZM8 581 aa14.55□□□□□ -0.08
SS18-219ENST00000581570 MRPL43Q8N983 215 aaKnown RBP14.55□□□□□ -0.08
SS18-219ENST00000581570 CASD1Q96PB1 797 aa14.55□□□□□ -0.08
SS18-219ENST00000581570 MYL10Q9BUA6 226 aa14.55□□□□□ -0.08
SS18-219ENST00000581570 SPG21Q9NZD8 308 aa14.55□□□□□ -0.08
SS18-219ENST00000581570 LIMD1Q9UGP4 676 aa14.55□□□□□ -0.08
SS18-219ENST00000581570 NFASCO94856 1347 aa14.55□□□□□ -0.08
SS18-219ENST00000581570 HOXA2O43364 376 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms